RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
FAM3D-201ENST00000358781 EZH2Q15910 746 aaKnown RBP23.18■■□□□ 1.3
FAM3D-201ENST00000358781 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
FAM3D-201ENST00000358781 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
FAM3D-201ENST00000358781 KAT6BQ8WYB5 2073 aa23.17■■□□□ 1.3
FAM3D-201ENST00000358781 KCNQ2O43526 872 aa23.14■■□□□ 1.3
FAM3D-201ENST00000358781 ACSBG1Q96GR2 724 aa23.14■■□□□ 1.3
FAM3D-201ENST00000358781 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.3
FAM3D-201ENST00000358781 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.3
FAM3D-201ENST00000358781 RREB1Q92766 1687 aa23.14■■□□□ 1.29
FAM3D-201ENST00000358781 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
FAM3D-201ENST00000358781 PLSCR1O15162 318 aa23.12■■□□□ 1.29
FAM3D-201ENST00000358781 PKD1L3Q7Z443 1732 aa23.12■■□□□ 1.29
FAM3D-201ENST00000358781 MTHFSP49914 203 aa23.11■■□□□ 1.29
FAM3D-201ENST00000358781 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
FAM3D-201ENST00000358781 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
FAM3D-201ENST00000358781 PCDH11XQ9BZA7 1347 aa23.1■■□□□ 1.29
FAM3D-201ENST00000358781 PCDH11YQ9BZA8 1340 aa23.1■■□□□ 1.29
FAM3D-201ENST00000358781 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
FAM3D-201ENST00000358781 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
FAM3D-201ENST00000358781 BTAF1O14981 1849 aa23.09■■□□□ 1.29
FAM3D-201ENST00000358781 DOT1LQ8TEK3 1739 aa23.08■■□□□ 1.29
FAM3D-201ENST00000358781 IL13P35225 146 aa23.08■■□□□ 1.28
FAM3D-201ENST00000358781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.08■■□□□ 1.28
FAM3D-201ENST00000358781 CYP27B1O15528 508 aa23.07■■□□□ 1.28
FAM3D-201ENST00000358781 PLEKHG2Q9H7P9 1386 aa23.07■■□□□ 1.28
FAM3D-201ENST00000358781 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
FAM3D-201ENST00000358781 PRIM1P49642 420 aaKnown RBP23.05■■□□□ 1.28
FAM3D-201ENST00000358781 PROM2Q8N271 834 aa23.04■■□□□ 1.28
FAM3D-201ENST00000358781 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
FAM3D-201ENST00000358781 SYTL4Q96C24 671 aaPredicted RBP23.03■■□□□ 1.28
FAM3D-201ENST00000358781 PSDA5PKW4 1024 aaPredicted RBP23.02■■□□□ 1.28
FAM3D-201ENST00000358781 R3HDM1Q15032 1099 aaKnown RBP23.02■■□□□ 1.28
FAM3D-201ENST00000358781 KDRP35968 1356 aa23.01■■□□□ 1.27
FAM3D-201ENST00000358781 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
FAM3D-201ENST00000358781 TXNRD1Q16881 649 aa23.01■■□□□ 1.27
FAM3D-201ENST00000358781 NBPF14Q5TI25 921 aa23.01■■□□□ 1.27
FAM3D-201ENST00000358781 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
FAM3D-201ENST00000358781 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
FAM3D-201ENST00000358781 NKX1-1Q15270 411 aaPredicted RBP23■■□□□ 1.27
FAM3D-201ENST00000358781 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
FAM3D-201ENST00000358781 PHKG2P15735 406 aa22.98■■□□□ 1.27
FAM3D-201ENST00000358781 PLEKHO1Q53GL0 409 aaPredicted RBP22.98■■□□□ 1.27
FAM3D-201ENST00000358781 IFNL2Q8IZJ0 200 aa22.98■■□□□ 1.27
FAM3D-201ENST00000358781 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
FAM3D-201ENST00000358781 ITGB4P16144 1822 aa22.96■■□□□ 1.27
FAM3D-201ENST00000358781 AMOTQ4VCS5 1084 aa22.96■■□□□ 1.27
FAM3D-201ENST00000358781 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
FAM3D-201ENST00000358781 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
FAM3D-201ENST00000358781 CFAP53Q96M91 514 aa22.94■■□□□ 1.26
FAM3D-201ENST00000358781 HMOX1P09601 288 aa22.93■■□□□ 1.26
FAM3D-201ENST00000358781 ZNF530Q6P9A1 599 aaPredicted RBP22.93■■□□□ 1.26
FAM3D-201ENST00000358781 LY75O60449 1722 aa22.93■■□□□ 1.26
FAM3D-201ENST00000358781 SLC27A3Q5K4L6 730 aa22.92■■□□□ 1.26
FAM3D-201ENST00000358781 MPRIPQ6WCQ1 1025 aa22.92■■□□□ 1.26
FAM3D-201ENST00000358781 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
FAM3D-201ENST00000358781 PAPPAQ13219 1627 aa22.91■■□□□ 1.26
FAM3D-201ENST00000358781 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
FAM3D-201ENST00000358781 HSP90AB1P08238 724 aaKnown RBP22.9■■□□□ 1.26
FAM3D-201ENST00000358781 PIGBQ92521 554 aa22.89■■□□□ 1.26
FAM3D-201ENST00000358781 STK32BQ9NY57 414 aa22.89■■□□□ 1.26
FAM3D-201ENST00000358781 C1orf141Q5JVX7 400 aa22.88■■□□□ 1.25
FAM3D-201ENST00000358781 DCAF5Q96JK2 942 aa22.88■■□□□ 1.25
FAM3D-201ENST00000358781 TMOD3Q9NYL9 352 aa22.87■■□□□ 1.25
FAM3D-201ENST00000358781 KDM6AO15550 1401 aaPredicted RBP22.87■■□□□ 1.25
FAM3D-201ENST00000358781 ERVV-2B6SEH9 535 aa22.86■■□□□ 1.25
FAM3D-201ENST00000358781 SLC15A2Q16348 729 aa22.86■■□□□ 1.25
FAM3D-201ENST00000358781 LRP5O75197 1615 aa22.86■■□□□ 1.25
FAM3D-201ENST00000358781 PALLDQ8WX93 1383 aa22.86■■□□□ 1.25
FAM3D-201ENST00000358781 KCNQ4P56696 695 aa22.85■■□□□ 1.25
FAM3D-201ENST00000358781 SMARCC1Q92922 1105 aaPredicted RBP22.85■■□□□ 1.25
FAM3D-201ENST00000358781 CCNL1Q9UK58 526 aaPredicted RBP22.85■■□□□ 1.25
FAM3D-201ENST00000358781 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
FAM3D-201ENST00000358781 RALBP1Q15311 655 aa22.83■■□□□ 1.25
FAM3D-201ENST00000358781 AKAP4Q5JQC9 854 aa22.83■■□□□ 1.25
FAM3D-201ENST00000358781 CASZ1Q86V15 1759 aa22.83■■□□□ 1.25
FAM3D-201ENST00000358781 ZNF827Q17R98 1081 aa22.82■■□□□ 1.24
FAM3D-201ENST00000358781 SCN11AQ9UI33 1791 aa22.82■■□□□ 1.24
FAM3D-201ENST00000358781 MTHFSDQ2M296 383 aaKnown RBP22.82■■□□□ 1.24
FAM3D-201ENST00000358781 AKT1S1Q96B36 256 aa22.82■■□□□ 1.24
FAM3D-201ENST00000358781 RSPH6AQ9H0K4 717 aa22.81■■□□□ 1.24
FAM3D-201ENST00000358781 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
FAM3D-201ENST00000358781 U2AF1L5P0DN76 240 aaPredicted RBP22.8■■□□□ 1.24
FAM3D-201ENST00000358781 CABP4P57796 275 aa22.8■■□□□ 1.24
FAM3D-201ENST00000358781 U2AF1Q01081 240 aaKnown RBP eCLIP22.8■■□□□ 1.24
FAM3D-201ENST00000358781 PDGFDQ9GZP0 370 aaPredicted RBP22.8■■□□□ 1.24
FAM3D-201ENST00000358781 TAF1LQ8IZX4 1826 aa22.79■■□□□ 1.24
FAM3D-201ENST00000358781 C5P01031 1676 aa22.79■■□□□ 1.24
FAM3D-201ENST00000358781 ATG3Q9NT62 314 aa22.79■■□□□ 1.24
FAM3D-201ENST00000358781 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
FAM3D-201ENST00000358781 VIRMAQ69YN4 1812 aaKnown RBP22.78■■□□□ 1.24
FAM3D-201ENST00000358781 QSER1Q2KHR3 1735 aa22.77■■□□□ 1.24
FAM3D-201ENST00000358781 TUBGCP6Q96RT7 1819 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 LOC102724428A0A0B4J2F2 783 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 RNMTO43148 476 aaKnown RBP22.76■■□□□ 1.23
FAM3D-201ENST00000358781 FCHSD2O94868 740 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 HMGB2P26583 209 aaKnown RBP22.76■■□□□ 1.23
FAM3D-201ENST00000358781 SIK1P57059 783 aa22.76■■□□□ 1.23
FAM3D-201ENST00000358781 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms