RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
SIRPA-202ENST00000358771 G2E3Q7L622 706 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
SIRPA-202ENST00000358771 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
SIRPA-202ENST00000358771 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
SIRPA-202ENST00000358771 LRRC59Q96AG4 307 aaKnown RBP17.42■□□□□ 0.38
SIRPA-202ENST00000358771 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
SIRPA-202ENST00000358771 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
SIRPA-202ENST00000358771 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
SIRPA-202ENST00000358771 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
SIRPA-202ENST00000358771 ADGRB3O60242 1522 aa17.41■□□□□ 0.38
SIRPA-202ENST00000358771 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
SIRPA-202ENST00000358771 SIL1Q9H173 461 aa17.41■□□□□ 0.38
SIRPA-202ENST00000358771 NAP1L5Q96NT1 182 aaPredicted RBP17.41■□□□□ 0.38
SIRPA-202ENST00000358771 MCM4P33991 863 aa17.4■□□□□ 0.38
SIRPA-202ENST00000358771 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.38
SIRPA-202ENST00000358771 G3BP1Q13283 466 aaKnown RBP eCLIP17.39■□□□□ 0.37
SIRPA-202ENST00000358771 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
SIRPA-202ENST00000358771 HDAC5Q9UQL6 1122 aa17.39■□□□□ 0.37
SIRPA-202ENST00000358771 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
SIRPA-202ENST00000358771 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
SIRPA-202ENST00000358771 EVA1CP58658 441 aa17.39■□□□□ 0.37
SIRPA-202ENST00000358771 GLI2P10070 1586 aa17.38■□□□□ 0.37
SIRPA-202ENST00000358771 TBX22Q9Y458 520 aa17.38■□□□□ 0.37
SIRPA-202ENST00000358771 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
SIRPA-202ENST00000358771 ERC2O15083 957 aa17.37■□□□□ 0.37
SIRPA-202ENST00000358771 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
SIRPA-202ENST00000358771 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
SIRPA-202ENST00000358771 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
SIRPA-202ENST00000358771 UPF3BQ9BZI7 483 aaKnown RBP17.37■□□□□ 0.37
SIRPA-202ENST00000358771 LAMC1P11047 1609 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 RABEP1Q15276 862 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 FLT4P35916 1363 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
SIRPA-202ENST00000358771 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 PTPRCP08575 1304 aa17.36■□□□□ 0.37
SIRPA-202ENST00000358771 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
SIRPA-202ENST00000358771 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
SIRPA-202ENST00000358771 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
SIRPA-202ENST00000358771 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
SIRPA-202ENST00000358771 CHL1O00533 1208 aa17.35■□□□□ 0.37
SIRPA-202ENST00000358771 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
SIRPA-202ENST00000358771 HOXC9P31274 260 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 MX1P20591 662 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
SIRPA-202ENST00000358771 SDSP20132 328 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
SIRPA-202ENST00000358771 DDX54Q8TDD1 881 aaKnown RBP17.34■□□□□ 0.37
SIRPA-202ENST00000358771 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.37
SIRPA-202ENST00000358771 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
SIRPA-202ENST00000358771 LMTK2Q8IWU2 1503 aa17.33■□□□□ 0.36
SIRPA-202ENST00000358771 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 TTC22Q5TAA0 569 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
SIRPA-202ENST00000358771 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
SIRPA-202ENST00000358771 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
SIRPA-202ENST00000358771 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 NUCB2P80303 420 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
SIRPA-202ENST00000358771 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
SIRPA-202ENST00000358771 SLC39A6Q13433 755 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 PPP1R42Q7Z4L9 355 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
SIRPA-202ENST00000358771 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
SIRPA-202ENST00000358771 CNTROBQ8N137 903 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
SIRPA-202ENST00000358771 MSH6P52701 1360 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 CAVIN1Q6NZI2 390 aaKnown RBP17.3■□□□□ 0.36
SIRPA-202ENST00000358771 TOM1L2Q6ZVM7 507 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
SIRPA-202ENST00000358771 PTMSP20962 102 aa17.29■□□□□ 0.36
SIRPA-202ENST00000358771 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SIRPA-202ENST00000358771 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
SIRPA-202ENST00000358771 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
SIRPA-202ENST00000358771 PTCD1O75127 700 aaKnown RBP17.29■□□□□ 0.36
SIRPA-202ENST00000358771 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
SIRPA-202ENST00000358771 SKOR2Q2VWA4 1001 aaPredicted RBP17.29■□□□□ 0.36
SIRPA-202ENST00000358771 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
SIRPA-202ENST00000358771 AACSQ86V21 672 aa17.28■□□□□ 0.36
SIRPA-202ENST00000358771 GCP02774 474 aa17.28■□□□□ 0.36
SIRPA-202ENST00000358771 FSD1Q9BTV5 496 aa17.28■□□□□ 0.36
SIRPA-202ENST00000358771 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
SIRPA-202ENST00000358771 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms