RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PLEKHG1Q9ULL1 1385 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 DCTPP1Q9H773 170 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
RFX3-202ENST00000358730 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 GOLGA6L3A6NEY3 463 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 CD2BP2O95400 341 aaKnown RBP10.68□□□□□ -0.7
RFX3-202ENST00000358730 PLEKHM2Q8IWE5 1019 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 LTKP29376 864 aa10.67□□□□□ -0.7
RFX3-202ENST00000358730 ANKRD44Q8N8A2 993 aa10.67□□□□□ -0.7
RFX3-202ENST00000358730 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
RFX3-202ENST00000358730 PTPRCP08575 1304 aa10.67□□□□□ -0.7
RFX3-202ENST00000358730 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
RFX3-202ENST00000358730 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
RFX3-202ENST00000358730 ARHGEF10O15013 1369 aa10.67□□□□□ -0.7
RFX3-202ENST00000358730 TTC22Q5TAA0 569 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 CRB1P82279 1406 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 TNPO1Q92973 898 aaKnown RBP10.66□□□□□ -0.7
RFX3-202ENST00000358730 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
RFX3-202ENST00000358730 RTL1A6NKG5 1358 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 MAP3K19Q56UN5 1328 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
RFX3-202ENST00000358730 APBB1O00213 710 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.7
RFX3-202ENST00000358730 FAM43AQ8N2R8 423 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 MEIS3Q99687 375 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 FSD2A1L4K1 749 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 C16orf71Q8IYS4 520 aaPredicted RBP10.65□□□□□ -0.7
RFX3-202ENST00000358730 MIS18AQ9NYP9 233 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 SSH2Q76I76 1423 aa10.65□□□□□ -0.7
RFX3-202ENST00000358730 FOXO3O43524 673 aa10.65□□□□□ -0.71
RFX3-202ENST00000358730 SLC4A2P04920 1241 aa10.65□□□□□ -0.71
RFX3-202ENST00000358730 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.71
RFX3-202ENST00000358730 OTUD7AQ8TE49 926 aaPredicted RBP10.65□□□□□ -0.71
RFX3-202ENST00000358730 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.71
RFX3-202ENST00000358730 GBP4Q96PP9 640 aa10.65□□□□□ -0.71
RFX3-202ENST00000358730 FLT4P35916 1363 aa10.64□□□□□ -0.71
RFX3-202ENST00000358730 EIF5BO60841 1220 aaKnown RBP10.64□□□□□ -0.71
RFX3-202ENST00000358730 TSPYL4Q9UJ04 414 aa10.64□□□□□ -0.71
RFX3-202ENST00000358730 TTC21AQ8NDW8 1320 aa10.64□□□□□ -0.71
RFX3-202ENST00000358730 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
RFX3-202ENST00000358730 XRCC6P12956 609 aaKnown RBP eCLIP10.64□□□□□ -0.71
RFX3-202ENST00000358730 RGPD8O14715 1765 aaPredicted RBP10.64□□□□□ -0.71
RFX3-202ENST00000358730 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
RFX3-202ENST00000358730 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
RFX3-202ENST00000358730 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
RFX3-202ENST00000358730 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
RFX3-202ENST00000358730 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
RFX3-202ENST00000358730 CEP170BQ9Y4F5 1589 aaPredicted RBP10.63□□□□□ -0.71
RFX3-202ENST00000358730 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
RFX3-202ENST00000358730 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
RFX3-202ENST00000358730 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 PIK3C2AO00443 1686 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 AMPHP49418 695 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
RFX3-202ENST00000358730 CASC1Q6TDU7 716 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 KDRP35968 1356 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 F6X3S4 739 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 HMMRO75330 724 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 SDSP20132 328 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 RABEP1Q15276 862 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 G2E3Q7L622 706 aa10.62□□□□□ -0.71
RFX3-202ENST00000358730 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
RFX3-202ENST00000358730 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
RFX3-202ENST00000358730 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
RFX3-202ENST00000358730 AK9Q5TCS8 1911 aa10.61□□□□□ -0.71
RFX3-202ENST00000358730 MRE11P49959 708 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
RFX3-202ENST00000358730 EYA1Q99502 592 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 USP26Q9BXU7 913 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 LRRC37A3O60309 1634 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 SSFA2P28290 1259 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 STK31Q9BXU1 1019 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 SLIT1O75093 1534 aa10.6□□□□□ -0.71
RFX3-202ENST00000358730 PTMSP20962 102 aa10.59□□□□□ -0.71
RFX3-202ENST00000358730 GRPEL1Q9HAV7 217 aa10.59□□□□□ -0.71
RFX3-202ENST00000358730 ARHGAP23Q9P227 1491 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
RFX3-202ENST00000358730 GOLGA6L22H0YM25 854 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 REC8O95072 547 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 GNAI2P04899 355 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 NLRP6P59044 892 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 RRAGDQ9NQL2 400 aaPredicted RBP10.58□□□□□ -0.72
RFX3-202ENST00000358730 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
RFX3-202ENST00000358730 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
RFX3-202ENST00000358730 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
RFX3-202ENST00000358730 EXOC6BQ9Y2D4 811 aa10.57□□□□□ -0.72
RFX3-202ENST00000358730 XRN1Q8IZH2 1706 aaKnown RBP10.57□□□□□ -0.72
RFX3-202ENST00000358730 FLIIQ13045 1269 aa10.57□□□□□ -0.72
RFX3-202ENST00000358730 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
RFX3-202ENST00000358730 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
RFX3-202ENST00000358730 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 ST18O60284 1047 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 PDE1AP54750 535 aa10.56□□□□□ -0.72
RFX3-202ENST00000358730 MARF1Q9Y4F3 1742 aaKnown RBP10.56□□□□□ -0.72
RFX3-202ENST00000358730 ERC2O15083 957 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms