RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
PHTF1-201ENST00000357783 C22orf23Q9BZE7 217 aa19.89■□□□□ 0.77
PHTF1-201ENST00000357783 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
PHTF1-201ENST00000357783 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
PHTF1-201ENST00000357783 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
PHTF1-201ENST00000357783 KDRP35968 1356 aa19.88■□□□□ 0.77
PHTF1-201ENST00000357783 IGSF1Q8N6C5 1336 aa19.88■□□□□ 0.77
PHTF1-201ENST00000357783 SLKQ9H2G2 1235 aaPredicted RBP19.88■□□□□ 0.77
PHTF1-201ENST00000357783 RGS12O14924 1447 aa19.87■□□□□ 0.77
PHTF1-201ENST00000357783 MARF1Q9Y4F3 1742 aaKnown RBP19.87■□□□□ 0.77
PHTF1-201ENST00000357783 TBC1D2Q9BYX2 928 aa19.87■□□□□ 0.77
PHTF1-201ENST00000357783 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
PHTF1-201ENST00000357783 ABTB2Q8N961 1025 aa19.86■□□□□ 0.77
PHTF1-201ENST00000357783 TSPYL4Q9UJ04 414 aa19.86■□□□□ 0.77
PHTF1-201ENST00000357783 KIF24Q5T7B8 1368 aa19.85■□□□□ 0.77
PHTF1-201ENST00000357783 INTS3Q68E01 1043 aaKnown RBP19.85■□□□□ 0.77
PHTF1-201ENST00000357783 C14orf37Q86TY3 774 aa19.85■□□□□ 0.77
PHTF1-201ENST00000357783 RBM33Q96EV2 1170 aaKnown RBP19.85■□□□□ 0.77
PHTF1-201ENST00000357783 HOXC9P31274 260 aa19.84■□□□□ 0.77
PHTF1-201ENST00000357783 GAS2L2Q8NHY3 880 aa19.84■□□□□ 0.77
PHTF1-201ENST00000357783 LTV1Q96GA3 475 aaPredicted RBP19.84■□□□□ 0.77
PHTF1-201ENST00000357783 BMP2KLQ5H9B9 411 aa19.83■□□□□ 0.76
PHTF1-201ENST00000357783 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
PHTF1-201ENST00000357783 MSH6P52701 1360 aa19.82■□□□□ 0.76
PHTF1-201ENST00000357783 PTPRCP08575 1304 aa19.82■□□□□ 0.76
PHTF1-201ENST00000357783 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
PHTF1-201ENST00000357783 ANKLE2Q86XL3 938 aa19.82■□□□□ 0.76
PHTF1-201ENST00000357783 PHF8Q9UPP1 1060 aa19.81■□□□□ 0.76
PHTF1-201ENST00000357783 USP54Q70EL1 1684 aa19.8■□□□□ 0.76
PHTF1-201ENST00000357783 ATP10DQ9P241 1426 aa19.79■□□□□ 0.76
PHTF1-201ENST00000357783 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
PHTF1-201ENST00000357783 G2E3Q7L622 706 aa19.79■□□□□ 0.76
PHTF1-201ENST00000357783 ANTXR1Q9H6X2 564 aa19.79■□□□□ 0.76
PHTF1-201ENST00000357783 NWD1Q149M9 1564 aa19.79■□□□□ 0.76
PHTF1-201ENST00000357783 MEIS3Q99687 375 aa19.78■□□□□ 0.76
PHTF1-201ENST00000357783 ANKRD44Q8N8A2 993 aa19.78■□□□□ 0.76
PHTF1-201ENST00000357783 DCTPP1Q9H773 170 aa19.78■□□□□ 0.76
PHTF1-201ENST00000357783 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
PHTF1-201ENST00000357783 LTN1O94822 1766 aa19.77■□□□□ 0.76
PHTF1-201ENST00000357783 USHBP1Q8N6Y0 703 aa19.77■□□□□ 0.76
PHTF1-201ENST00000357783 RTL1A6NKG5 1358 aa19.77■□□□□ 0.75
PHTF1-201ENST00000357783 LRRC37A3O60309 1634 aa19.77■□□□□ 0.75
PHTF1-201ENST00000357783 CEP85Q6P2H3 762 aa19.76■□□□□ 0.75
PHTF1-201ENST00000357783 SLC4A10Q6U841 1118 aa19.76■□□□□ 0.75
PHTF1-201ENST00000357783 F6X3S4 739 aa19.76■□□□□ 0.75
PHTF1-201ENST00000357783 GSE1Q14687 1217 aa19.76■□□□□ 0.75
PHTF1-201ENST00000357783 SETD1BQ9UPS6 1966 aaKnown RBP19.76■□□□□ 0.75
PHTF1-201ENST00000357783 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
PHTF1-201ENST00000357783 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
PHTF1-201ENST00000357783 MAP3K5Q99683 1374 aa19.75■□□□□ 0.75
PHTF1-201ENST00000357783 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
PHTF1-201ENST00000357783 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
PHTF1-201ENST00000357783 RBM25P49756 843 aaKnown RBP19.74■□□□□ 0.75
PHTF1-201ENST00000357783 ESCO1Q5FWF5 840 aa19.74■□□□□ 0.75
PHTF1-201ENST00000357783 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
PHTF1-201ENST00000357783 ZBTB7CA1YPR0 619 aa19.73■□□□□ 0.75
PHTF1-201ENST00000357783 APBB1O00213 710 aa19.73■□□□□ 0.75
PHTF1-201ENST00000357783 PLEKHM2Q8IWE5 1019 aa19.73■□□□□ 0.75
PHTF1-201ENST00000357783 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
PHTF1-201ENST00000357783 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
PHTF1-201ENST00000357783 IL17REQ8NFR9 667 aa19.73■□□□□ 0.75
PHTF1-201ENST00000357783 GSPT1P15170 499 aaKnown RBP19.72■□□□□ 0.75
PHTF1-201ENST00000357783 HSCBQ8IWL3 235 aa19.72■□□□□ 0.75
PHTF1-201ENST00000357783 PSME1Q06323 249 aa19.72■□□□□ 0.75
PHTF1-201ENST00000357783 FAM208AQ9UK61 1670 aaKnown RBP19.71■□□□□ 0.75
PHTF1-201ENST00000357783 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
PHTF1-201ENST00000357783 CCT4P50991 539 aaKnown RBP19.7■□□□□ 0.74
PHTF1-201ENST00000357783 SMARCA5O60264 1052 aaPredicted RBP19.7■□□□□ 0.74
PHTF1-201ENST00000357783 OTUD7AQ8TE49 926 aaPredicted RBP19.7■□□□□ 0.74
PHTF1-201ENST00000357783 NFAT5O94916 1531 aa19.7■□□□□ 0.74
PHTF1-201ENST00000357783 CDC45O75419 566 aa19.69■□□□□ 0.74
PHTF1-201ENST00000357783 PLEKHG5O94827 1062 aa19.69■□□□□ 0.74
PHTF1-201ENST00000357783 CCDC30Q5VVM6 783 aa19.69■□□□□ 0.74
PHTF1-201ENST00000357783 IP6K1Q92551 441 aa19.69■□□□□ 0.74
PHTF1-201ENST00000357783 FLIIQ13045 1269 aa19.68■□□□□ 0.74
PHTF1-201ENST00000357783 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
PHTF1-201ENST00000357783 TAF7Q15545 349 aaPredicted RBP19.68■□□□□ 0.74
PHTF1-201ENST00000357783 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
PHTF1-201ENST00000357783 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
PHTF1-201ENST00000357783 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
PHTF1-201ENST00000357783 XPCQ01831 940 aaPredicted RBP19.67■□□□□ 0.74
PHTF1-201ENST00000357783 ADAMTSL3P82987 1691 aa19.66■□□□□ 0.74
PHTF1-201ENST00000357783 HMMRO75330 724 aa19.66■□□□□ 0.74
PHTF1-201ENST00000357783 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
PHTF1-201ENST00000357783 KIF2CQ99661 725 aa19.65■□□□□ 0.74
PHTF1-201ENST00000357783 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
PHTF1-201ENST00000357783 ORAI2Q96SN7 254 aa19.65■□□□□ 0.74
PHTF1-201ENST00000357783 CACNA1FO60840 1977 aa19.65■□□□□ 0.74
PHTF1-201ENST00000357783 GNAI2P04899 355 aa19.64■□□□□ 0.73
PHTF1-201ENST00000357783 SNX21Q969T3 373 aa19.64■□□□□ 0.73
PHTF1-201ENST00000357783 KCNH5Q8NCM2 988 aa19.64■□□□□ 0.73
PHTF1-201ENST00000357783 CHMP5Q9NZZ3 219 aa19.64■□□□□ 0.73
PHTF1-201ENST00000357783 PRKCSHP14314 528 aaPredicted RBP19.63■□□□□ 0.73
PHTF1-201ENST00000357783 LRRC59Q96AG4 307 aaKnown RBP19.63■□□□□ 0.73
PHTF1-201ENST00000357783 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
PHTF1-201ENST00000357783 HDGFL1Q5TGJ6 251 aa19.62■□□□□ 0.73
PHTF1-201ENST00000357783 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
PHTF1-201ENST00000357783 LGR6Q9HBX8 967 aa19.61■□□□□ 0.73
PHTF1-201ENST00000357783 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
PHTF1-201ENST00000357783 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms