RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SYCE3A1L190 88 aa14.84□□□□□ -0.03
SMARCAL1-201ENST00000357276 MBD3O95983 291 aa14.84□□□□□ -0.03
SMARCAL1-201ENST00000357276 IFT57Q9NWB7 429 aa14.84□□□□□ -0.03
SMARCAL1-201ENST00000357276 ST18O60284 1047 aa14.84□□□□□ -0.03
SMARCAL1-201ENST00000357276 ATAD2Q6PL18 1390 aa14.83□□□□□ -0.03
SMARCAL1-201ENST00000357276 UTP14CQ5TAP6 766 aaKnown RBP14.83□□□□□ -0.03
SMARCAL1-201ENST00000357276 GTF2F1P35269 517 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMARCAL1-201ENST00000357276 MYRIPQ8NFW9 859 aa14.83□□□□□ -0.04
SMARCAL1-201ENST00000357276 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
SMARCAL1-201ENST00000357276 NFE2L2Q16236 605 aa14.82□□□□□ -0.04
SMARCAL1-201ENST00000357276 RGS12O14924 1447 aa14.82□□□□□ -0.04
SMARCAL1-201ENST00000357276 SDSP20132 328 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 API5Q9BZZ5 524 aaKnown RBP14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 BRD1O95696 1058 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 GNAI1P63096 354 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 C16orf71Q8IYS4 520 aaPredicted RBP14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 ANKRD44Q8N8A2 993 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 MBIPQ9NS73 344 aa14.81□□□□□ -0.04
SMARCAL1-201ENST00000357276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMARCAL1-201ENST00000357276 KIAA2012Q0VF49 1180 aa14.8□□□□□ -0.04
SMARCAL1-201ENST00000357276 CUL4AQ13619 759 aa14.8□□□□□ -0.04
SMARCAL1-201ENST00000357276 CHAMP1Q96JM3 812 aa14.8□□□□□ -0.04
SMARCAL1-201ENST00000357276 CHGAP10645 457 aaKnown RBP14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 DMTNQ08495 405 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 IL17RAQ96F46 866 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 PRIMPOLQ96LW4 560 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 CPSF1Q10570 1443 aaKnown RBP14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 ZSCAN20P17040 1043 aaPredicted RBP14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 IDI1Q13907 227 aa14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 OTUD7AQ8TE49 926 aaPredicted RBP14.79□□□□□ -0.04
SMARCAL1-201ENST00000357276 VGFO15240 615 aaPredicted RBP14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 REC8O95072 547 aa14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 ZNF710Q8N1W2 664 aa14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 C3P01024 1663 aa14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 TWISTNBQ3B726 338 aaPredicted RBP14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 TSPY26PQ9H489 355 aa14.78□□□□□ -0.04
SMARCAL1-201ENST00000357276 PIBF1Q8WXW3 757 aa14.77□□□□□ -0.04
SMARCAL1-201ENST00000357276 RPAP2Q8IXW5 612 aaPredicted RBP14.77□□□□□ -0.04
SMARCAL1-201ENST00000357276 OSBPL3Q9H4L5 887 aa14.77□□□□□ -0.04
SMARCAL1-201ENST00000357276 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.04
SMARCAL1-201ENST00000357276 UBR1Q8IWV7 1749 aa14.77□□□□□ -0.05
SMARCAL1-201ENST00000357276 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
SMARCAL1-201ENST00000357276 CASC1Q6TDU7 716 aa14.77□□□□□ -0.05
SMARCAL1-201ENST00000357276 C8orf58Q8NAV2 365 aa14.77□□□□□ -0.05
SMARCAL1-201ENST00000357276 THUMPD2Q9BTF0 503 aaKnown RBP14.77□□□□□ -0.05
SMARCAL1-201ENST00000357276 INTS4Q96HW7 963 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 TMX3Q96JJ7 454 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 SETD1AO15047 1707 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 ERC2O15083 957 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 MCM2P49736 904 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 CEP85Q6P2H3 762 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 SPTLC3Q9NUV7 552 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 YTHDC2Q9H6S0 1430 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-201ENST00000357276 FAM184AQ8NB25 1140 aa14.75□□□□□ -0.05
SMARCAL1-201ENST00000357276 RNF214Q8ND24 703 aa14.75□□□□□ -0.05
SMARCAL1-201ENST00000357276 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
SMARCAL1-201ENST00000357276 SRPK2P78362 688 aaKnown RBP14.74□□□□□ -0.05
SMARCAL1-201ENST00000357276 CDK12Q9NYV4 1490 aaPredicted RBP14.74□□□□□ -0.05
SMARCAL1-201ENST00000357276 SYAP1Q96A49 352 aaPredicted RBP14.74□□□□□ -0.05
SMARCAL1-201ENST00000357276 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
SMARCAL1-201ENST00000357276 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
SMARCAL1-201ENST00000357276 TMEM87AQ8NBN3 555 aa14.73□□□□□ -0.05
SMARCAL1-201ENST00000357276 IL13P35225 146 aa14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 FKBP5Q13451 457 aaPredicted RBP14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 NOLC1Q14978 699 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 TCHHQ07283 1943 aa14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 ATP7BP35670 1465 aa14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 FBXO31Q5XUX0 539 aaPredicted RBP14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 ELL2O00472 640 aaPredicted RBP14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 PHF14O94880 888 aa14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 ESF1Q9H501 851 aaKnown RBP14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 SALL3Q9BXA9 1300 aa14.72□□□□□ -0.05
SMARCAL1-201ENST00000357276 TNRQ92752 1358 aa14.71□□□□□ -0.05
SMARCAL1-201ENST00000357276 ANAPC15P60006 121 aa14.71□□□□□ -0.05
SMARCAL1-201ENST00000357276 KIAA0232Q92628 1395 aa14.71□□□□□ -0.05
SMARCAL1-201ENST00000357276 ADAMTSL3P82987 1691 aa14.71□□□□□ -0.06
SMARCAL1-201ENST00000357276 NEK4P51957 841 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 SAFB2Q14151 953 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 HDGFL2Q7Z4V5 671 aaPredicted RBP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 JARID2Q92833 1246 aaPredicted RBP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 ALKQ9UM73 1620 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 LMOD3Q0VAK6 560 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 GTPBP4Q9BZE4 634 aaKnown RBP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 MSH6P52701 1360 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 SSH2Q76I76 1423 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 PRDM10Q9NQV6 1147 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 RPAP1Q9BWH6 1393 aaPredicted RBP14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 NRXN3Q9Y4C0 1643 aa14.7□□□□□ -0.06
SMARCAL1-201ENST00000357276 GADD45BO75293 160 aaPredicted RBP14.69□□□□□ -0.06
SMARCAL1-201ENST00000357276 PTMAP06454 111 aaKnown RBP14.69□□□□□ -0.06
SMARCAL1-201ENST00000357276 DLC1Q96QB1 1528 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms