RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
MAP1LC3C-201ENST00000357246 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
MAP1LC3C-201ENST00000357246 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
MAP1LC3C-201ENST00000357246 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
MAP1LC3C-201ENST00000357246 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
MAP1LC3C-201ENST00000357246 EYA1Q99502 592 aa11.57□□□□□ -0.56
MAP1LC3C-201ENST00000357246 KCNQ2O43526 872 aa11.56□□□□□ -0.56
MAP1LC3C-201ENST00000357246 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
MAP1LC3C-201ENST00000357246 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
MAP1LC3C-201ENST00000357246 NPC1L1Q9UHC9 1359 aa11.55□□□□□ -0.56
MAP1LC3C-201ENST00000357246 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
MAP1LC3C-201ENST00000357246 EIF4A2Q14240 407 aaKnown RBP11.55□□□□□ -0.56
MAP1LC3C-201ENST00000357246 PROM2Q8N271 834 aa11.55□□□□□ -0.56
MAP1LC3C-201ENST00000357246 MEGF6O75095 1541 aa11.55□□□□□ -0.56
MAP1LC3C-201ENST00000357246 RGPD3A6NKT7 1758 aaPredicted RBP11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 RGPD4Q7Z3J3 1758 aa11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 NBPF14Q5TI25 921 aa11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
MAP1LC3C-201ENST00000357246 RREB1Q92766 1687 aa11.53□□□□□ -0.56
MAP1LC3C-201ENST00000357246 SHANK3Q9BYB0 1731 aa11.53□□□□□ -0.56
MAP1LC3C-201ENST00000357246 NHSQ6T4R5 1651 aa11.52□□□□□ -0.56
MAP1LC3C-201ENST00000357246 PRIM1P49642 420 aaKnown RBP11.52□□□□□ -0.57
MAP1LC3C-201ENST00000357246 MTHFSP49914 203 aa11.52□□□□□ -0.57
MAP1LC3C-201ENST00000357246 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
MAP1LC3C-201ENST00000357246 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 TXNRD1Q16881 649 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 SPG7Q9UQ90 795 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 IGSF1Q8N6C5 1336 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PCDH11XQ9BZA7 1347 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PCDH11YQ9BZA8 1340 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
MAP1LC3C-201ENST00000357246 NUP188Q5SRE5 1749 aa11.5□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
MAP1LC3C-201ENST00000357246 CYP27B1O15528 508 aa11.5□□□□□ -0.57
MAP1LC3C-201ENST00000357246 IL13P35225 146 aa11.5□□□□□ -0.57
MAP1LC3C-201ENST00000357246 BTAF1O14981 1849 aa11.5□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PKD1L3Q7Z443 1732 aa11.49□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
MAP1LC3C-201ENST00000357246 IFNL2Q8IZJ0 200 aa11.48□□□□□ -0.57
MAP1LC3C-201ENST00000357246 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
MAP1LC3C-201ENST00000357246 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
MAP1LC3C-201ENST00000357246 SYTL4Q96C24 671 aaPredicted RBP11.47□□□□□ -0.57
MAP1LC3C-201ENST00000357246 DIAPH1O60610 1272 aaKnown RBP11.46□□□□□ -0.57
MAP1LC3C-201ENST00000357246 PHKG2P15735 406 aa11.46□□□□□ -0.57
MAP1LC3C-201ENST00000357246 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.57
MAP1LC3C-201ENST00000357246 ITGB4P16144 1822 aa11.46□□□□□ -0.58
MAP1LC3C-201ENST00000357246 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.58
MAP1LC3C-201ENST00000357246 KDRP35968 1356 aa11.45□□□□□ -0.58
MAP1LC3C-201ENST00000357246 ZBTB22O15209 634 aa11.45□□□□□ -0.58
MAP1LC3C-201ENST00000357246 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
MAP1LC3C-201ENST00000357246 SLC15A2Q16348 729 aa11.45□□□□□ -0.58
MAP1LC3C-201ENST00000357246 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
MAP1LC3C-201ENST00000357246 LY75O60449 1722 aa11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 HSP90AB1P08238 724 aaKnown RBP11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 AEBP1Q8IUX7 1158 aa11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 STK32BQ9NY57 414 aa11.44□□□□□ -0.58
MAP1LC3C-201ENST00000357246 CNGB1Q14028 1251 aaPredicted RBP11.43□□□□□ -0.58
MAP1LC3C-201ENST00000357246 PIGBQ92521 554 aa11.43□□□□□ -0.58
MAP1LC3C-201ENST00000357246 DCAF5Q96JK2 942 aa11.43□□□□□ -0.58
MAP1LC3C-201ENST00000357246 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
MAP1LC3C-201ENST00000357246 PPP2R1AP30153 589 aa11.42□□□□□ -0.58
MAP1LC3C-201ENST00000357246 SMARCC1Q92922 1105 aaPredicted RBP11.42□□□□□ -0.58
MAP1LC3C-201ENST00000357246 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
MAP1LC3C-201ENST00000357246 LRP5O75197 1615 aa11.42□□□□□ -0.58
MAP1LC3C-201ENST00000357246 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
MAP1LC3C-201ENST00000357246 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
MAP1LC3C-201ENST00000357246 SPON1Q9HCB6 807 aa11.41□□□□□ -0.58
MAP1LC3C-201ENST00000357246 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
MAP1LC3C-201ENST00000357246 HMOX1P09601 288 aa11.4□□□□□ -0.58
MAP1LC3C-201ENST00000357246 C1orf141Q5JVX7 400 aa11.4□□□□□ -0.58
MAP1LC3C-201ENST00000357246 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
MAP1LC3C-201ENST00000357246 CCNL1Q9UK58 526 aaPredicted RBP11.4□□□□□ -0.58
MAP1LC3C-201ENST00000357246 COL3A1P02461 1466 aaPredicted RBP11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 KCNQ4P56696 695 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 NUDCQ9Y266 331 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
MAP1LC3C-201ENST00000357246 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 DDX10Q13206 875 aaKnown RBP11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 CASZ1Q86V15 1759 aa11.38□□□□□ -0.59
MAP1LC3C-201ENST00000357246 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 CABP4P57796 275 aa11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 HOMEZQ8IX15 550 aa11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
MAP1LC3C-201ENST00000357246 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms