RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 EIF4A2Q14240 407 aaKnown RBP18.53■□□□□ 0.56
SHANK2-202ENST00000357171 USHBP1Q8N6Y0 703 aa18.53■□□□□ 0.56
SHANK2-202ENST00000357171 EYA1Q99502 592 aa18.53■□□□□ 0.56
SHANK2-202ENST00000357171 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
SHANK2-202ENST00000357171 PTF1AQ7RTS3 328 aa18.52■□□□□ 0.55
SHANK2-202ENST00000357171 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.55
SHANK2-202ENST00000357171 PLSCR1O15162 318 aa18.51■□□□□ 0.55
SHANK2-202ENST00000357171 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
SHANK2-202ENST00000357171 BTAF1O14981 1849 aa18.5■□□□□ 0.55
SHANK2-202ENST00000357171 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
SHANK2-202ENST00000357171 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
SHANK2-202ENST00000357171 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
SHANK2-202ENST00000357171 DOT1LQ8TEK3 1739 aa18.48■□□□□ 0.55
SHANK2-202ENST00000357171 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-202ENST00000357171 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
SHANK2-202ENST00000357171 KCNQ2O43526 872 aa18.47■□□□□ 0.55
SHANK2-202ENST00000357171 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
SHANK2-202ENST00000357171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.551e-7■■■□□ 18.9
SHANK2-202ENST00000357171 IL13P35225 146 aa18.45■□□□□ 0.54
SHANK2-202ENST00000357171 MTHFSP49914 203 aa18.45■□□□□ 0.54
SHANK2-202ENST00000357171 KDRP35968 1356 aa18.44■□□□□ 0.54
SHANK2-202ENST00000357171 PCDH11XQ9BZA7 1347 aa18.44■□□□□ 0.54
SHANK2-202ENST00000357171 PCDH11YQ9BZA8 1340 aa18.44■□□□□ 0.54
SHANK2-202ENST00000357171 ITGB4P16144 1822 aa18.44■□□□□ 0.54
SHANK2-202ENST00000357171 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
SHANK2-202ENST00000357171 CYP27B1O15528 508 aa18.43■□□□□ 0.54
SHANK2-202ENST00000357171 PROM2Q8N271 834 aa18.43■□□□□ 0.54
SHANK2-202ENST00000357171 ACSBG1Q96GR2 724 aa18.43■□□□□ 0.54
SHANK2-202ENST00000357171 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
SHANK2-202ENST00000357171 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-202ENST00000357171 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-202ENST00000357171 LY75O60449 1722 aa18.41■□□□□ 0.54
SHANK2-202ENST00000357171 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
SHANK2-202ENST00000357171 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
SHANK2-202ENST00000357171 TXNRD1Q16881 649 aa18.38■□□□□ 0.53
SHANK2-202ENST00000357171 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
SHANK2-202ENST00000357171 PAPPAQ13219 1627 aa18.38■□□□□ 0.53
SHANK2-202ENST00000357171 SULT6B1Q6IMI4 303 aa18.36■□□□□ 0.53
SHANK2-202ENST00000357171 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
SHANK2-202ENST00000357171 PHKG2P15735 406 aa18.35■□□□□ 0.53
SHANK2-202ENST00000357171 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
SHANK2-202ENST00000357171 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
SHANK2-202ENST00000357171 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
SHANK2-202ENST00000357171 R3HDM1Q15032 1099 aaKnown RBP18.34■□□□□ 0.53
SHANK2-202ENST00000357171 AMOTQ4VCS5 1084 aa18.34■□□□□ 0.53
SHANK2-202ENST00000357171 NBPF14Q5TI25 921 aa18.34■□□□□ 0.53
SHANK2-202ENST00000357171 LRP5O75197 1615 aa18.33■□□□□ 0.53
SHANK2-202ENST00000357171 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.52
SHANK2-202ENST00000357171 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-202ENST00000357171 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-202ENST00000357171 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-202ENST00000357171 CASZ1Q86V15 1759 aa18.32■□□□□ 0.52
SHANK2-202ENST00000357171 CNGB1Q14028 1251 aaPredicted RBP18.31■□□□□ 0.52
SHANK2-202ENST00000357171 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
SHANK2-202ENST00000357171 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
SHANK2-202ENST00000357171 SCN11AQ9UI33 1791 aa18.31■□□□□ 0.52
SHANK2-202ENST00000357171 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
SHANK2-202ENST00000357171 QSER1Q2KHR3 1735 aa18.31■□□□□ 0.52
SHANK2-202ENST00000357171 KDM6AO15550 1401 aaPredicted RBP18.29■□□□□ 0.52
SHANK2-202ENST00000357171 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
SHANK2-202ENST00000357171 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
SHANK2-202ENST00000357171 MPRIPQ6WCQ1 1025 aa18.29■□□□□ 0.52
SHANK2-202ENST00000357171 PIGBQ92521 554 aa18.29■□□□□ 0.52
SHANK2-202ENST00000357171 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
SHANK2-202ENST00000357171 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
SHANK2-202ENST00000357171 HMOX1P09601 288 aa18.28■□□□□ 0.52
SHANK2-202ENST00000357171 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-202ENST00000357171 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
SHANK2-202ENST00000357171 TUBGCP6Q96RT7 1819 aa18.27■□□□□ 0.52
SHANK2-202ENST00000357171 SLC15A2Q16348 729 aa18.27■□□□□ 0.51
SHANK2-202ENST00000357171 CFAP53Q96M91 514 aa18.27■□□□□ 0.51
SHANK2-202ENST00000357171 C5P01031 1676 aa18.26■□□□□ 0.51
SHANK2-202ENST00000357171 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
SHANK2-202ENST00000357171 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
SHANK2-202ENST00000357171 RALBP1Q15311 655 aa18.24■□□□□ 0.51
SHANK2-202ENST00000357171 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
SHANK2-202ENST00000357171 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-202ENST00000357171 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
SHANK2-202ENST00000357171 STK32BQ9NY57 414 aa18.24■□□□□ 0.51
SHANK2-202ENST00000357171 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
SHANK2-202ENST00000357171 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
SHANK2-202ENST00000357171 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
SHANK2-202ENST00000357171 U2SURPO15042 1029 aaKnown RBP18.22■□□□□ 0.51
SHANK2-202ENST00000357171 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
SHANK2-202ENST00000357171 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
SHANK2-202ENST00000357171 CCNL1Q9UK58 526 aaPredicted RBP18.22■□□□□ 0.51
SHANK2-202ENST00000357171 MRC1P22897 1456 aa18.22■□□□□ 0.51
SHANK2-202ENST00000357171 KCNQ4P56696 695 aa18.21■□□□□ 0.51
SHANK2-202ENST00000357171 PDGFDQ9GZP0 370 aaPredicted RBP18.21■□□□□ 0.51
SHANK2-202ENST00000357171 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
SHANK2-202ENST00000357171 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
SHANK2-202ENST00000357171 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
SHANK2-202ENST00000357171 ASAP1Q9ULH1 1129 aa18.2■□□□□ 0.5
SHANK2-202ENST00000357171 C4BP0C0L5 1744 aa18.19■□□□□ 0.5
SHANK2-202ENST00000357171 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
SHANK2-202ENST00000357171 FCHSD2O94868 740 aa18.18■□□□□ 0.5
SHANK2-202ENST00000357171 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
SHANK2-202ENST00000357171 SIPA1L3O60292 1781 aaPredicted RBP18.18■□□□□ 0.5
SHANK2-202ENST00000357171 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
SHANK2-202ENST00000357171 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms