RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
LSS-201ENST00000356396 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
LSS-201ENST00000356396 ZNF530Q6P9A1 599 aaPredicted RBP17.7■□□□□ 0.42
LSS-201ENST00000356396 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
LSS-201ENST00000356396 LNPKQ9C0E8 428 aa17.7■□□□□ 0.42
LSS-201ENST00000356396 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
LSS-201ENST00000356396 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
LSS-201ENST00000356396 PHAXQ9H814 394 aaKnown RBP17.69■□□□□ 0.42
LSS-201ENST00000356396 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 BRINP3Q76B58 766 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 IP6K1Q92551 441 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 PDE3AQ14432 1141 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 IFT57Q9NWB7 429 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 C1orf167Q5SNV9 1468 aa17.68■□□□□ 0.42
LSS-201ENST00000356396 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
LSS-201ENST00000356396 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
LSS-201ENST00000356396 NRKQ7Z2Y5 1582 aa17.67■□□□□ 0.42
LSS-201ENST00000356396 GNAT3A8MTJ3 354 aa17.66■□□□□ 0.42
LSS-201ENST00000356396 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
LSS-201ENST00000356396 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
LSS-201ENST00000356396 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
LSS-201ENST00000356396 NBR1Q14596 966 aa17.65■□□□□ 0.42
LSS-201ENST00000356396 CHL1O00533 1208 aa17.64■□□□□ 0.42
LSS-201ENST00000356396 SLAIN2Q9P270 581 aa17.64■□□□□ 0.42
LSS-201ENST00000356396 MEIS3Q99687 375 aa17.64■□□□□ 0.41
LSS-201ENST00000356396 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
LSS-201ENST00000356396 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
LSS-201ENST00000356396 RGPD2P0DJD1 1756 aa17.63■□□□□ 0.41
LSS-201ENST00000356396 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
LSS-201ENST00000356396 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
LSS-201ENST00000356396 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
LSS-201ENST00000356396 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
LSS-201ENST00000356396 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
LSS-201ENST00000356396 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
LSS-201ENST00000356396 FKBP5Q13451 457 aaPredicted RBP17.62■□□□□ 0.41
LSS-201ENST00000356396 BACH2Q9BYV9 841 aa17.62■□□□□ 0.41
LSS-201ENST00000356396 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
LSS-201ENST00000356396 SIRT2Q8IXJ6 389 aa17.61■□□□□ 0.41
LSS-201ENST00000356396 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
LSS-201ENST00000356396 PROSER3Q2NL68 480 aa17.61■□□□□ 0.41
LSS-201ENST00000356396 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
LSS-201ENST00000356396 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
LSS-201ENST00000356396 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
LSS-201ENST00000356396 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
LSS-201ENST00000356396 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
LSS-201ENST00000356396 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
LSS-201ENST00000356396 TEFQ10587 303 aa17.6■□□□□ 0.41
LSS-201ENST00000356396 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
LSS-201ENST00000356396 OTUD7AQ8TE49 926 aaPredicted RBP17.6■□□□□ 0.41
LSS-201ENST00000356396 PXDNQ92626 1479 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 MSH6P52701 1360 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 ZNF330Q9Y3S2 320 aaPredicted RBP17.59■□□□□ 0.41
LSS-201ENST00000356396 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 ZBTB40Q9NUA8 1239 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 MST1RQ04912 1400 aa17.59■□□□□ 0.41
LSS-201ENST00000356396 MYL6BP14649 208 aa17.58■□□□□ 0.41
LSS-201ENST00000356396 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.41
LSS-201ENST00000356396 IL16Q14005 1332 aa17.58■□□□□ 0.4
LSS-201ENST00000356396 ZBTB7BO15156 539 aaPredicted RBP17.58■□□□□ 0.4
LSS-201ENST00000356396 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
LSS-201ENST00000356396 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
LSS-201ENST00000356396 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
LSS-201ENST00000356396 CHPF2Q9P2E5 772 aa17.58■□□□□ 0.4
LSS-201ENST00000356396 CRB1P82279 1406 aa17.57■□□□□ 0.4
LSS-201ENST00000356396 LMTK3Q96Q04 1460 aa17.57■□□□□ 0.4
LSS-201ENST00000356396 ERBB3P21860 1342 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 USP19O94966 1318 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 KIF16BQ96L93 1317 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 IPO8O15397 1037 aaKnown RBP17.56■□□□□ 0.4
LSS-201ENST00000356396 C1orf141Q5JVX7 400 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 ARXQ96QS3 562 aa17.56■□□□□ 0.4
LSS-201ENST00000356396 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
LSS-201ENST00000356396 ZNF142P52746 1687 aaPredicted RBP17.55■□□□□ 0.4
LSS-201ENST00000356396 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
LSS-201ENST00000356396 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
LSS-201ENST00000356396 ARHGEF10O15013 1369 aa17.55■□□□□ 0.4
LSS-201ENST00000356396 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
LSS-201ENST00000356396 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
LSS-201ENST00000356396 LTN1O94822 1766 aa17.54■□□□□ 0.4
LSS-201ENST00000356396 MARF1Q9Y4F3 1742 aaKnown RBP17.54■□□□□ 0.4
LSS-201ENST00000356396 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
LSS-201ENST00000356396 KDRP35968 1356 aa17.53■□□□□ 0.4
LSS-201ENST00000356396 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
LSS-201ENST00000356396 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
LSS-201ENST00000356396 NPHP3Q7Z494 1330 aa17.53■□□□□ 0.4
LSS-201ENST00000356396 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
LSS-201ENST00000356396 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
LSS-201ENST00000356396 NWD1Q149M9 1564 aa17.52■□□□□ 0.4
LSS-201ENST00000356396 FLIIQ13045 1269 aa17.52■□□□□ 0.4
LSS-201ENST00000356396 ALDH1L2Q3SY69 923 aa17.52■□□□□ 0.39
LSS-201ENST00000356396 CYP27B1O15528 508 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms