RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 APPP05067 770 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 TNNT3P45378 269 aaPredicted RBP19.06■□□□□ 0.64
RTN3-205ENST00000356000 ZNF622Q969S3 477 aaKnown RBP eCLIP19.06■□□□□ 0.643e-7■■■■□ 19.7
RTN3-205ENST00000356000 LAMC1P11047 1609 aa19.06■□□□□ 0.64
RTN3-205ENST00000356000 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
RTN3-205ENST00000356000 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
RTN3-205ENST00000356000 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
RTN3-205ENST00000356000 TMF1P82094 1093 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 PYCARDQ9ULZ3 195 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
RTN3-205ENST00000356000 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 RABEP1Q15276 862 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 SYAP1Q96A49 352 aaPredicted RBP19.04■□□□□ 0.64
RTN3-205ENST00000356000 RSPH14Q9UHP6 348 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 LOC102724159A0A0B4J2E5 919 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 SMTNL1A8MU46 457 aa19.04■□□□□ 0.64
RTN3-205ENST00000356000 PWP2Q15269 919 aaKnown RBP19.04■□□□□ 0.64
RTN3-205ENST00000356000 SYNMO15061 1565 aa19.03■□□□□ 0.64
RTN3-205ENST00000356000 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
RTN3-205ENST00000356000 TPM3P06753 285 aa19.03■□□□□ 0.64
RTN3-205ENST00000356000 NUCB1Q02818 461 aa19.03■□□□□ 0.64
RTN3-205ENST00000356000 KCNF1Q9H3M0 494 aa19.02■□□□□ 0.64
RTN3-205ENST00000356000 PHF14O94880 888 aa19.02■□□□□ 0.63
RTN3-205ENST00000356000 CTR9Q6PD62 1173 aa19.02■□□□□ 0.63
RTN3-205ENST00000356000 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
RTN3-205ENST00000356000 NEURL4Q96JN8 1562 aa19.01■□□□□ 0.63
RTN3-205ENST00000356000 DHX16O60231 1041 aaKnown RBP19.01■□□□□ 0.63
RTN3-205ENST00000356000 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
RTN3-205ENST00000356000 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
RTN3-205ENST00000356000 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
RTN3-205ENST00000356000 ZNF397Q8NF99 534 aaPredicted RBP19.01■□□□□ 0.63
RTN3-205ENST00000356000 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
RTN3-205ENST00000356000 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
RTN3-205ENST00000356000 DZIP1LQ8IYY4 767 aaKnown RBP19■□□□□ 0.63
RTN3-205ENST00000356000 SIRT1Q96EB6 747 aa19■□□□□ 0.63
RTN3-205ENST00000356000 RASSF4Q9H2L5 321 aa19■□□□□ 0.63
RTN3-205ENST00000356000 KDM5AP29375 1690 aaKnown RBP19■□□□□ 0.63
RTN3-205ENST00000356000 REC8O95072 547 aa19■□□□□ 0.63
RTN3-205ENST00000356000 GTF2A1P52655 376 aaPredicted RBP18.99■□□□□ 0.63
RTN3-205ENST00000356000 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
RTN3-205ENST00000356000 ZKSCAN2Q63HK3 967 aa18.99■□□□□ 0.63
RTN3-205ENST00000356000 GGT6Q6P531 493 aa18.99■□□□□ 0.63
RTN3-205ENST00000356000 NAA30Q147X3 362 aaPredicted RBP18.98■□□□□ 0.63
RTN3-205ENST00000356000 KIF1BPQ96EK5 621 aa18.98■□□□□ 0.63
RTN3-205ENST00000356000 CHAMP1Q96JM3 812 aa18.98■□□□□ 0.63
RTN3-205ENST00000356000 ABCC3O15438 1527 aa18.98■□□□□ 0.63
RTN3-205ENST00000356000 ASXL1Q8IXJ9 1541 aa18.98■□□□□ 0.63
RTN3-205ENST00000356000 KDM4AO75164 1064 aa18.97■□□□□ 0.63
RTN3-205ENST00000356000 KMT5BQ4FZB7 885 aa18.97■□□□□ 0.63
RTN3-205ENST00000356000 MYCBPQ99417 103 aaPredicted RBP18.97■□□□□ 0.63
RTN3-205ENST00000356000 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
RTN3-205ENST00000356000 NCAPGQ9BPX3 1015 aa18.97■□□□□ 0.63
RTN3-205ENST00000356000 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
RTN3-205ENST00000356000 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 CNPY4Q8N129 248 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 NOL10Q9BSC4 688 aaKnown RBP18.96■□□□□ 0.63
RTN3-205ENST00000356000 LNPKQ9C0E8 428 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.96■□□□□ 0.63
RTN3-205ENST00000356000 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
RTN3-205ENST00000356000 MUM1L1Q5H9M0 696 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 ICE2Q659A1 982 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 PAXBP1Q9Y5B6 917 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 NCKAP5LQ9HCH0 1330 aa18.96■□□□□ 0.63
RTN3-205ENST00000356000 DDX19BQ9UMR2 479 aa18.95■□□□□ 0.62
RTN3-205ENST00000356000 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
RTN3-205ENST00000356000 ADGRL2O95490 1459 aa18.95■□□□□ 0.62
RTN3-205ENST00000356000 SOCS7O14512 581 aa18.95■□□□□ 0.62
RTN3-205ENST00000356000 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
RTN3-205ENST00000356000 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
RTN3-205ENST00000356000 PRR29P0C7W0 189 aa18.94■□□□□ 0.62
RTN3-205ENST00000356000 ST7Q9NRC1 585 aa18.94■□□□□ 0.62
RTN3-205ENST00000356000 IQGAP1P46940 1657 aa18.94■□□□□ 0.62
RTN3-205ENST00000356000 VWDEQ8N2E2 1590 aa18.94■□□□□ 0.62
RTN3-205ENST00000356000 KANK1Q14678 1352 aa18.93■□□□□ 0.62
RTN3-205ENST00000356000 CCDC112Q8NEF3 446 aa18.93■□□□□ 0.62
RTN3-205ENST00000356000 BRMS1Q9HCU9 246 aa18.93■□□□□ 0.62
RTN3-205ENST00000356000 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
RTN3-205ENST00000356000 KIF3BO15066 747 aa18.93■□□□□ 0.62
RTN3-205ENST00000356000 SMC4Q9NTJ3 1288 aa18.93■□□□□ 0.62
RTN3-205ENST00000356000 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
RTN3-205ENST00000356000 RAD50Q92878 1312 aa18.92■□□□□ 0.62
RTN3-205ENST00000356000 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
RTN3-205ENST00000356000 ERVK-7P63135 1459 aa18.92■□□□□ 0.62
RTN3-205ENST00000356000 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
RTN3-205ENST00000356000 NFATC2IPQ8NCF5 419 aa18.92■□□□□ 0.62
RTN3-205ENST00000356000 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
RTN3-205ENST00000356000 SLFNL1Q499Z3 407 aa18.91■□□□□ 0.62
RTN3-205ENST00000356000 GOLGA6L6A8MZA4 724 aa18.91■□□□□ 0.62
RTN3-205ENST00000356000 GUCY2CP25092 1073 aa18.91■□□□□ 0.62
RTN3-205ENST00000356000 CASQ1P31415 396 aa18.91■□□□□ 0.62
RTN3-205ENST00000356000 ZNF446Q9NWS9 450 aa18.91■□□□□ 0.62
RTN3-205ENST00000356000 TOM1O60784 492 aa18.9■□□□□ 0.62
RTN3-205ENST00000356000 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
RTN3-205ENST00000356000 LMTK2Q8IWU2 1503 aa18.9■□□□□ 0.62
RTN3-205ENST00000356000 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
RTN3-205ENST00000356000 SLIT1O75093 1534 aa18.9■□□□□ 0.62
RTN3-205ENST00000356000 HCLS1P14317 486 aaPredicted RBP18.89■□□□□ 0.62
RTN3-205ENST00000356000 CDC45O75419 566 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms