RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 TXLNBQ8N3L3 684 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 ZGPATQ8N5A5 531 aaKnown RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 BCL2L13Q9BXK5 485 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 BCCIPQ9P287 314 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCR9-201ENST00000355983 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.25□□□□□ -0.93
CCR9-201ENST00000355983 TRAPPC8Q9Y2L5 1435 aa9.25□□□□□ -0.93
CCR9-201ENST00000355983 ERO1AQ96HE7 468 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 RASSF4Q9H2L5 321 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 KCND1Q9NSA2 647 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 HNRNPH2P55795 449 aaKnown RBP9.24□□□□□ -0.93
CCR9-201ENST00000355983 RAD51AP2Q09MP3 1159 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
CCR9-201ENST00000355983 NOL10Q9BSC4 688 aaKnown RBP9.24□□□□□ -0.93
CCR9-201ENST00000355983 TTC22Q5TAA0 569 aa9.23□□□□□ -0.93
CCR9-201ENST00000355983 RTL1A6NKG5 1358 aa9.23□□□□□ -0.93
CCR9-201ENST00000355983 RPAP1Q9BWH6 1393 aaPredicted RBP9.23□□□□□ -0.93
CCR9-201ENST00000355983 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
CCR9-201ENST00000355983 WDR33Q9C0J8 1336 aaKnown RBP9.23□□□□□ -0.93
CCR9-201ENST00000355983 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
CCR9-201ENST00000355983 ANKRD45Q5TZF3 282 aa9.23□□□□□ -0.93
CCR9-201ENST00000355983 NSD2O96028 1365 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 ATP8B1O43520 1251 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 UBE2HP62256 183 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 TEX35Q5T0J7 233 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 CFAP53Q96M91 514 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 NOB1Q9ULX3 412 aaKnown RBP9.22□□□□□ -0.93
CCR9-201ENST00000355983 TRPM2O94759 1503 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 CDC42BPBQ9Y5S2 1711 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 KIF2AO00139 706 aaPredicted RBP9.22□□□□□ -0.93
CCR9-201ENST00000355983 EPB41L2O43491 1005 aaKnown RBP9.22□□□□□ -0.93
CCR9-201ENST00000355983 NEMFO60524 1076 aa9.22□□□□□ -0.93
CCR9-201ENST00000355983 GSPT1P15170 499 aaKnown RBP9.22□□□□□ -0.93
CCR9-201ENST00000355983 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
CCR9-201ENST00000355983 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.93
CCR9-201ENST00000355983 SOX12O15370 315 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 HTATSF1O43719 755 aaKnown RBP9.21□□□□□ -0.93
CCR9-201ENST00000355983 TNNT1P13805 278 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 ANAPC15P60006 121 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 RGL3Q3MIN7 710 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 SAMD1Q6SPF0 538 aaPredicted RBP9.21□□□□□ -0.93
CCR9-201ENST00000355983 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 NCAPGQ9BPX3 1015 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 CARD14Q9BXL6 1004 aa9.21□□□□□ -0.93
CCR9-201ENST00000355983 V9GYY5 206 aaPredicted RBP9.21□□□□□ -0.93
CCR9-201ENST00000355983 H2AFXP16104 143 aaPredicted RBP9.21□□□□□ -0.94
CCR9-201ENST00000355983 ICE2Q659A1 982 aa9.21□□□□□ -0.94
CCR9-201ENST00000355983 USP48Q86UV5 1035 aa9.21□□□□□ -0.94
CCR9-201ENST00000355983 TMX3Q96JJ7 454 aa9.21□□□□□ -0.94
CCR9-201ENST00000355983 MYCBPQ99417 103 aaPredicted RBP9.21□□□□□ -0.94
CCR9-201ENST00000355983 CWC15Q9P013 229 aaKnown RBP9.21□□□□□ -0.94
CCR9-201ENST00000355983 DHX16O60231 1041 aaKnown RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 TUBB4AP04350 444 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 HCLS1P14317 486 aaPredicted RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 CDC25BP30305 580 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 CASQ1P31415 396 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 TNNT3P45378 269 aaPredicted RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 TPM4P67936 248 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 SLC26A8Q96RN1 970 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 ABCA8O94911 1581 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 TCHHQ07283 1943 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 ZC3H13Q5T200 1668 aaKnown RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 MRC2Q9UBG0 1479 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 HDAC5Q9UQL6 1122 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 MAGI1Q96QZ7 1491 aaPredicted RBP9.2□□□□□ -0.94
CCR9-201ENST00000355983 ELP1O95163 1332 aa9.2□□□□□ -0.94
CCR9-201ENST00000355983 RGS12O14924 1447 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 GUCY2CP25092 1073 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 PSD3Q9NYI0 1048 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 PTPRCP08575 1304 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 UBXN6Q9BZV1 441 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 RSPH14Q9UHP6 348 aa9.19□□□□□ -0.94
CCR9-201ENST00000355983 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
CCR9-201ENST00000355983 CEP135Q66GS9 1140 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 FBXO38Q6PIJ6 1188 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 NYAP1Q6ZVC0 841 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 RRP7AQ9Y3A4 280 aaKnown RBP9.18□□□□□ -0.94
CCR9-201ENST00000355983 PTPRTO14522 1441 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ERICH4A6NGS2 130 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ERC2O15083 957 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 AP5Z1O43299 807 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 GADD45BO75293 160 aaPredicted RBP9.18□□□□□ -0.94
CCR9-201ENST00000355983 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 GPS2Q13227 327 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 GOLGA6L1Q8N7Z2 621 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 DCTPP1Q9H773 170 aa9.18□□□□□ -0.94
CCR9-201ENST00000355983 ATG3Q9NT62 314 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms