RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 CD2BP2O95400 341 aaKnown RBP18.43■□□□□ 0.54
STRN3-201ENST00000355683 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
STRN3-201ENST00000355683 ESPNB1AK53 854 aa18.42■□□□□ 0.54
STRN3-201ENST00000355683 SMC3Q9UQE7 1217 aa18.42■□□□□ 0.54
STRN3-201ENST00000355683 ACEP12821 1306 aa18.42■□□□□ 0.54
STRN3-201ENST00000355683 NUCB1Q02818 461 aa18.42■□□□□ 0.54
STRN3-201ENST00000355683 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
STRN3-201ENST00000355683 ERC2O15083 957 aa18.41■□□□□ 0.54
STRN3-201ENST00000355683 PKP1Q13835 747 aa18.41■□□□□ 0.54
STRN3-201ENST00000355683 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
STRN3-201ENST00000355683 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
STRN3-201ENST00000355683 CCDC8Q9H0W5 538 aaPredicted RBP18.41■□□□□ 0.54
STRN3-201ENST00000355683 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
STRN3-201ENST00000355683 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
STRN3-201ENST00000355683 NUCB2P80303 420 aa18.4■□□□□ 0.54
STRN3-201ENST00000355683 EIF4A2Q14240 407 aaKnown RBP18.4■□□□□ 0.54
STRN3-201ENST00000355683 CCDC30Q5VVM6 783 aa18.4■□□□□ 0.54
STRN3-201ENST00000355683 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
STRN3-201ENST00000355683 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
STRN3-201ENST00000355683 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
STRN3-201ENST00000355683 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.53
STRN3-201ENST00000355683 RABEP1Q15276 862 aa18.39■□□□□ 0.53
STRN3-201ENST00000355683 SKOR2Q2VWA4 1001 aaPredicted RBP18.39■□□□□ 0.53
STRN3-201ENST00000355683 KDM5CP41229 1560 aa18.39■□□□□ 0.53
STRN3-201ENST00000355683 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
STRN3-201ENST00000355683 NPHP1O15259 732 aa18.39■□□□□ 0.53
STRN3-201ENST00000355683 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 H3BQV1 296 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 CAMK4Q16566 473 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
STRN3-201ENST00000355683 LRRC59Q96AG4 307 aaKnown RBP18.38■□□□□ 0.53
STRN3-201ENST00000355683 BICD2Q8TD16 824 aa18.37■□□□□ 0.53
STRN3-201ENST00000355683 DDX11Q96FC9 970 aa18.37■□□□□ 0.53
STRN3-201ENST00000355683 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
STRN3-201ENST00000355683 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
STRN3-201ENST00000355683 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
STRN3-201ENST00000355683 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
STRN3-201ENST00000355683 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
STRN3-201ENST00000355683 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
STRN3-201ENST00000355683 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
STRN3-201ENST00000355683 GCC2Q8IWJ2 1684 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 PTMSP20962 102 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 FLIIQ13045 1269 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
STRN3-201ENST00000355683 SRCIN1Q9C0H9 1055 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
STRN3-201ENST00000355683 PA2G4Q9UQ80 394 aaKnown RBP18.36■□□□□ 0.53
STRN3-201ENST00000355683 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
STRN3-201ENST00000355683 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
STRN3-201ENST00000355683 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 GNAI3P08754 354 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 MX1P20591 662 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
STRN3-201ENST00000355683 LTKP29376 864 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 BMP2KLQ5H9B9 411 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 AACSQ86V21 672 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
STRN3-201ENST00000355683 RAB11FIP4Q86YS3 637 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 JAKMIP1Q96N16 626 aaKnown RBP18.34■□□□□ 0.53
STRN3-201ENST00000355683 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
STRN3-201ENST00000355683 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
STRN3-201ENST00000355683 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
STRN3-201ENST00000355683 APPP05067 770 aa18.33■□□□□ 0.53
STRN3-201ENST00000355683 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.53
STRN3-201ENST00000355683 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.53
STRN3-201ENST00000355683 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.53
STRN3-201ENST00000355683 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.53
STRN3-201ENST00000355683 TFIP11Q9UBB9 837 aaKnown RBP18.33■□□□□ 0.53
STRN3-201ENST00000355683 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
STRN3-201ENST00000355683 NECAB1Q8N987 351 aa18.33■□□□□ 0.52
STRN3-201ENST00000355683 ZBTB9Q96C00 473 aa18.33■□□□□ 0.52
STRN3-201ENST00000355683 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.52
STRN3-201ENST00000355683 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
STRN3-201ENST00000355683 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 STRN4Q9NRL3 753 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 PTPRTO14522 1441 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 ZMYM4Q5VZL5 1548 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 NEXNQ0ZGT2 675 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 AAMPQ13685 434 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 RAPGEF4Q8WZA2 1011 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 LRRC2Q9BYS8 371 aa18.32■□□□□ 0.52
STRN3-201ENST00000355683 PIP4K2BP78356 416 aa18.31■□□□□ 0.52
STRN3-201ENST00000355683 GUCY1B3Q02153 619 aa18.31■□□□□ 0.52
STRN3-201ENST00000355683 SF3A1Q15459 793 aaKnown RBP18.31■□□□□ 0.52
STRN3-201ENST00000355683 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
STRN3-201ENST00000355683 USP19O94966 1318 aa18.31■□□□□ 0.52
STRN3-201ENST00000355683 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
STRN3-201ENST00000355683 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
STRN3-201ENST00000355683 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms