RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MCM10Q7L590 875 aa20.29■□□□□ 0.84
CTSA-202ENST00000354880 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
CTSA-202ENST00000354880 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
CTSA-202ENST00000354880 IFT57Q9NWB7 429 aa20.28■□□□□ 0.84
CTSA-202ENST00000354880 ADAMTS2O95450 1211 aa20.27■□□□□ 0.84
CTSA-202ENST00000354880 NEFLP07196 543 aa20.27■□□□□ 0.84
CTSA-202ENST00000354880 GNAI1P63096 354 aa20.27■□□□□ 0.84
CTSA-202ENST00000354880 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
CTSA-202ENST00000354880 NUTM2BA6NNL0 878 aaPredicted RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 NUTM2EB1AL46 878 aaPredicted RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 NUTM2AQ8IVF1 878 aaPredicted RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
CTSA-202ENST00000354880 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
CTSA-202ENST00000354880 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
CTSA-202ENST00000354880 CFAP44Q96MT7 982 aa20.26■□□□□ 0.83
CTSA-202ENST00000354880 CARD10Q9BWT7 1032 aa20.26■□□□□ 0.83
CTSA-202ENST00000354880 MEGF6O75095 1541 aa20.26■□□□□ 0.83
CTSA-202ENST00000354880 RNF123Q5XPI4 1314 aa20.26■□□□□ 0.83
CTSA-202ENST00000354880 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
CTSA-202ENST00000354880 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
CTSA-202ENST00000354880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTSA-202ENST00000354880 CRB1P82279 1406 aa20.23■□□□□ 0.83
CTSA-202ENST00000354880 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
CTSA-202ENST00000354880 PLCH1Q4KWH8 1693 aa20.23■□□□□ 0.83
CTSA-202ENST00000354880 HSPA1LP34931 641 aa20.22■□□□□ 0.83
CTSA-202ENST00000354880 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
CTSA-202ENST00000354880 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
CTSA-202ENST00000354880 MBIPQ9NS73 344 aa20.22■□□□□ 0.83
CTSA-202ENST00000354880 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
CTSA-202ENST00000354880 LRRC37A3O60309 1634 aa20.22■□□□□ 0.83
CTSA-202ENST00000354880 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
CTSA-202ENST00000354880 SPATA31A6Q5VVP1 1343 aa20.21■□□□□ 0.83
CTSA-202ENST00000354880 FKBP8Q14318 412 aa20.2■□□□□ 0.82
CTSA-202ENST00000354880 OVOS2A0A0G2JMS6 1433 aa20.2■□□□□ 0.82
CTSA-202ENST00000354880 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
CTSA-202ENST00000354880 CHL1O00533 1208 aa20.2■□□□□ 0.82
CTSA-202ENST00000354880 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
CTSA-202ENST00000354880 PKD1L3Q7Z443 1732 aa20.2■□□□□ 0.82
CTSA-202ENST00000354880 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
CTSA-202ENST00000354880 IL2RBP14784 551 aa20.18■□□□□ 0.82
CTSA-202ENST00000354880 USP35Q9P2H5 1018 aa20.18■□□□□ 0.82
CTSA-202ENST00000354880 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
CTSA-202ENST00000354880 NWD2Q9ULI1 1742 aa20.17■□□□□ 0.82
CTSA-202ENST00000354880 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
CTSA-202ENST00000354880 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
CTSA-202ENST00000354880 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
CTSA-202ENST00000354880 SLIT2O94813 1529 aa20.17■□□□□ 0.82
CTSA-202ENST00000354880 IFNL2Q8IZJ0 200 aa20.16■□□□□ 0.82
CTSA-202ENST00000354880 PHKG2P15735 406 aa20.16■□□□□ 0.82
CTSA-202ENST00000354880 RARSP54136 660 aaKnown RBP20.16■□□□□ 0.82
CTSA-202ENST00000354880 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
CTSA-202ENST00000354880 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
CTSA-202ENST00000354880 TAF7Q15545 349 aaPredicted RBP20.15■□□□□ 0.82
CTSA-202ENST00000354880 ZCRB1Q8TBF4 217 aaKnown RBP20.15■□□□□ 0.82
CTSA-202ENST00000354880 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
CTSA-202ENST00000354880 BCAR3O75815 825 aa20.14■□□□□ 0.81
CTSA-202ENST00000354880 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
CTSA-202ENST00000354880 CYP27B1O15528 508 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 TEFQ10587 303 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 C8orf37Q96NL8 207 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 LRP6O75581 1613 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 PCDH11XQ9BZA7 1347 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 PCDH11YQ9BZA8 1340 aa20.13■□□□□ 0.81
CTSA-202ENST00000354880 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.13■□□□□ 0.81
CTSA-202ENST00000354880 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
CTSA-202ENST00000354880 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
CTSA-202ENST00000354880 PLIN1O60240 522 aa20.11■□□□□ 0.81
CTSA-202ENST00000354880 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
CTSA-202ENST00000354880 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
CTSA-202ENST00000354880 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
CTSA-202ENST00000354880 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
CTSA-202ENST00000354880 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 DISP2A7MBM2 1401 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 SPATA31A1Q5TZJ5 1347 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 VAMP4O75379 141 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 DCAF5Q96JK2 942 aa20.1■□□□□ 0.81
CTSA-202ENST00000354880 THRAP3Q9Y2W1 955 aaKnown RBP20.1■□□□□ 0.81
CTSA-202ENST00000354880 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
CTSA-202ENST00000354880 ELL2O00472 640 aaPredicted RBP20.09■□□□□ 0.81
CTSA-202ENST00000354880 SHANK3Q9BYB0 1731 aa20.09■□□□□ 0.81
CTSA-202ENST00000354880 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
CTSA-202ENST00000354880 FNBP4Q8N3X1 1017 aaPredicted RBP20.09■□□□□ 0.81
CTSA-202ENST00000354880 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
CTSA-202ENST00000354880 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
CTSA-202ENST00000354880 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
CTSA-202ENST00000354880 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.8
CTSA-202ENST00000354880 WNK3Q9BYP7 1800 aa20.07■□□□□ 0.8
CTSA-202ENST00000354880 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
CTSA-202ENST00000354880 KRT24Q2M2I5 525 aa20.07■□□□□ 0.8
CTSA-202ENST00000354880 SSH1Q8WYL5 1049 aa20.07■□□□□ 0.8
CTSA-202ENST00000354880 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
CTSA-202ENST00000354880 SIPA1L3O60292 1781 aaPredicted RBP20.07■□□□□ 0.8
CTSA-202ENST00000354880 BTBD11A6QL63 1104 aa20.06■□□□□ 0.8
CTSA-202ENST00000354880 MEX3CQ5U5Q3 659 aaKnown RBP20.06■□□□□ 0.8
CTSA-202ENST00000354880 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms