RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
RPE-201ENST00000354506 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
RPE-201ENST00000354506 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 CHL1O00533 1208 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
RPE-201ENST00000354506 PRR36Q9H6K5 1346 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
RPE-201ENST00000354506 COG3Q96JB2 828 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
RPE-201ENST00000354506 UBE2Q2Q8WVN8 375 aa11.93□□□□□ -0.5
RPE-201ENST00000354506 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
RPE-201ENST00000354506 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
RPE-201ENST00000354506 ISY1Q9ULR0 285 aaKnown RBP11.92□□□□□ -0.5
RPE-201ENST00000354506 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
RPE-201ENST00000354506 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
RPE-201ENST00000354506 TXNDC2Q86VQ3 553 aa11.92□□□□□ -0.5
RPE-201ENST00000354506 CRB1P82279 1406 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
RPE-201ENST00000354506 MRE11P49959 708 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 PKP1Q13835 747 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 ANKRD44Q8N8A2 993 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 OTUD7AQ8TE49 926 aaPredicted RBP11.91□□□□□ -0.5
RPE-201ENST00000354506 SSH2Q76I76 1423 aa11.91□□□□□ -0.5
RPE-201ENST00000354506 SMARCA5O60264 1052 aaPredicted RBP11.91□□□□□ -0.5
RPE-201ENST00000354506 EIF4A2Q14240 407 aaKnown RBP11.91□□□□□ -0.5
RPE-201ENST00000354506 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 CDC45O75419 566 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 TSPOAP1O95153 1857 aa11.9□□□□□ -0.5
RPE-201ENST00000354506 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 RBM10P98175 930 aaKnown RBP11.89□□□□□ -0.51
RPE-201ENST00000354506 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
RPE-201ENST00000354506 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 CEP85Q6P2H3 762 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 DDX49Q9Y6V7 483 aaKnown RBP11.89□□□□□ -0.51
RPE-201ENST00000354506 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
RPE-201ENST00000354506 ESPNB1AK53 854 aa11.88□□□□□ -0.51
RPE-201ENST00000354506 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
RPE-201ENST00000354506 PTPRCP08575 1304 aa11.88□□□□□ -0.51
RPE-201ENST00000354506 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
RPE-201ENST00000354506 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
RPE-201ENST00000354506 CYP2E1P05181 493 aaPredicted RBP11.87□□□□□ -0.51
RPE-201ENST00000354506 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
RPE-201ENST00000354506 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
RPE-201ENST00000354506 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
RPE-201ENST00000354506 SULT6B1Q6IMI4 303 aa11.87□□□□□ -0.51
RPE-201ENST00000354506 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
RPE-201ENST00000354506 USP6P35125 1406 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 PTMSP20962 102 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 CYB5RLQ6IPT4 315 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
RPE-201ENST00000354506 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 CLCN1P35523 988 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
RPE-201ENST00000354506 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
RPE-201ENST00000354506 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 MSH6P52701 1360 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 FMN2Q9NZ56 1722 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 RABEP1Q15276 862 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 OSBPL3Q9H4L5 887 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
RPE-201ENST00000354506 MLECQ14165 292 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 MCM10Q7L590 875 aa11.85□□□□□ -0.51
RPE-201ENST00000354506 ZGPATQ8N5A5 531 aaKnown RBP11.85□□□□□ -0.51
RPE-201ENST00000354506 ACEP12821 1306 aa11.84□□□□□ -0.51
RPE-201ENST00000354506 SDSP20132 328 aa11.84□□□□□ -0.51
RPE-201ENST00000354506 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
RPE-201ENST00000354506 ARHGEF10O15013 1369 aa11.84□□□□□ -0.51
RPE-201ENST00000354506 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
RPE-201ENST00000354506 KDRP35968 1356 aa11.84□□□□□ -0.51
RPE-201ENST00000354506 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.51
RPE-201ENST00000354506 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
RPE-201ENST00000354506 MEIS3Q99687 375 aa11.83□□□□□ -0.52
RPE-201ENST00000354506 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
RPE-201ENST00000354506 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 BAG4O95429 457 aaKnown RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 PTPRUQ92729 1446 aa11.82□□□□□ -0.52
RPE-201ENST00000354506 RIMS1Q86UR5 1692 aaKnown RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 XRN1Q8IZH2 1706 aaKnown RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 PLEKHG1Q9ULL1 1385 aa11.82□□□□□ -0.52
RPE-201ENST00000354506 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 NASPP49321 788 aaPredicted RBP11.82□□□□□ -0.52
RPE-201ENST00000354506 TNRQ92752 1358 aa11.82□□□□□ -0.52
RPE-201ENST00000354506 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
RPE-201ENST00000354506 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
RPE-201ENST00000354506 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
RPE-201ENST00000354506 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
RPE-201ENST00000354506 IL17RAQ96F46 866 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms