RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 PTF1AQ7RTS3 328 aa25.58■■□□□ 1.69
VPS72-201ENST00000354473 BCL11BQ9C0K0 894 aaPredicted RBP25.58■■□□□ 1.69
VPS72-201ENST00000354473 EZH2Q15910 746 aaKnown RBP25.57■■□□□ 1.68
VPS72-201ENST00000354473 CAMKK2Q96RR4 588 aa25.57■■□□□ 1.68
VPS72-201ENST00000354473 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 KAT6BQ8WYB5 2073 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 RREB1Q92766 1687 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 ZEB1P37275 1124 aaPredicted RBP25.55■■□□□ 1.68
VPS72-201ENST00000354473 ACSBG1Q96GR2 724 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 PKD1L3Q7Z443 1732 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 RGPD3A6NKT7 1758 aaPredicted RBP25.55■■□□□ 1.68
VPS72-201ENST00000354473 RGPD4Q7Z3J3 1758 aa25.55■■□□□ 1.68
VPS72-201ENST00000354473 KCNQ2O43526 872 aa25.53■■□□□ 1.68
VPS72-201ENST00000354473 MTHFSP49914 203 aa25.53■■□□□ 1.68
VPS72-201ENST00000354473 IGSF1Q8N6C5 1336 aa25.52■■□□□ 1.68
VPS72-201ENST00000354473 DOT1LQ8TEK3 1739 aa25.52■■□□□ 1.68
VPS72-201ENST00000354473 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
VPS72-201ENST00000354473 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
VPS72-201ENST00000354473 NUP188Q5SRE5 1749 aa25.51■■□□□ 1.67
VPS72-201ENST00000354473 BTAF1O14981 1849 aa25.5■■□□□ 1.67
VPS72-201ENST00000354473 PLSCR1O15162 318 aa25.47■■□□□ 1.67
VPS72-201ENST00000354473 IL13P35225 146 aa25.47■■□□□ 1.67
VPS72-201ENST00000354473 SPG7Q9UQ90 795 aa25.46■■□□□ 1.67
VPS72-201ENST00000354473 CYP27B1O15528 508 aa25.44■■□□□ 1.66
VPS72-201ENST00000354473 SYTL4Q96C24 671 aaPredicted RBP25.44■■□□□ 1.66
VPS72-201ENST00000354473 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
VPS72-201ENST00000354473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.43■■□□□ 1.665e-8■■■■□ 20
VPS72-201ENST00000354473 PLEKHG2Q9H7P9 1386 aa25.43■■□□□ 1.66
VPS72-201ENST00000354473 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
VPS72-201ENST00000354473 COL3A1P02461 1466 aaPredicted RBP25.42■■□□□ 1.66
VPS72-201ENST00000354473 TOGARAM1Q9Y4F4 1720 aa25.41■■□□□ 1.66
VPS72-201ENST00000354473 PSDA5PKW4 1024 aaPredicted RBP25.4■■□□□ 1.66
VPS72-201ENST00000354473 DIAPH1O60610 1272 aaKnown RBP25.4■■□□□ 1.66
VPS72-201ENST00000354473 SULT6B1Q6IMI4 303 aa25.4■■□□□ 1.66
VPS72-201ENST00000354473 KDRP35968 1356 aa25.39■■□□□ 1.66
VPS72-201ENST00000354473 PROM2Q8N271 834 aa25.38■■□□□ 1.65
VPS72-201ENST00000354473 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
VPS72-201ENST00000354473 R3HDM1Q15032 1099 aaKnown RBP25.37■■□□□ 1.65
VPS72-201ENST00000354473 TXNRD1Q16881 649 aa25.37■■□□□ 1.65
VPS72-201ENST00000354473 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
VPS72-201ENST00000354473 NBPF14Q5TI25 921 aa25.37■■□□□ 1.65
VPS72-201ENST00000354473 ITGB4P16144 1822 aa25.36■■□□□ 1.65
VPS72-201ENST00000354473 PHKG2P15735 406 aa25.36■■□□□ 1.65
VPS72-201ENST00000354473 PLEKHO1Q53GL0 409 aaPredicted RBP25.36■■□□□ 1.65
VPS72-201ENST00000354473 IFNL2Q8IZJ0 200 aa25.36■■□□□ 1.65
VPS72-201ENST00000354473 NKX1-1Q15270 411 aaPredicted RBP25.35■■□□□ 1.65
VPS72-201ENST00000354473 CFAP53Q96M91 514 aa25.35■■□□□ 1.65
VPS72-201ENST00000354473 HMOX1P09601 288 aa25.34■■□□□ 1.65
VPS72-201ENST00000354473 AMOTQ4VCS5 1084 aa25.34■■□□□ 1.65
VPS72-201ENST00000354473 ZNF530Q6P9A1 599 aaPredicted RBP25.33■■□□□ 1.64
VPS72-201ENST00000354473 LY75O60449 1722 aa25.32■■□□□ 1.64
VPS72-201ENST00000354473 ANO8Q9HCE9 1232 aaPredicted RBP25.32■■□□□ 1.64
VPS72-201ENST00000354473 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
VPS72-201ENST00000354473 MPRIPQ6WCQ1 1025 aa25.31■■□□□ 1.64
VPS72-201ENST00000354473 PAPPAQ13219 1627 aa25.29■■□□□ 1.64
VPS72-201ENST00000354473 HSP90AB1P08238 724 aaKnown RBP25.27■■□□□ 1.64
VPS72-201ENST00000354473 C1orf141Q5JVX7 400 aa25.27■■□□□ 1.64
VPS72-201ENST00000354473 LRRC4BQ9NT99 713 aa25.27■■□□□ 1.64
VPS72-201ENST00000354473 SLC27A3Q5K4L6 730 aa25.26■■□□□ 1.63
VPS72-201ENST00000354473 KDM6AO15550 1401 aaPredicted RBP25.25■■□□□ 1.63
VPS72-201ENST00000354473 PIGBQ92521 554 aa25.25■■□□□ 1.63
VPS72-201ENST00000354473 DCAF5Q96JK2 942 aa25.25■■□□□ 1.63
VPS72-201ENST00000354473 STK32BQ9NY57 414 aa25.25■■□□□ 1.63
VPS72-201ENST00000354473 TMOD3Q9NYL9 352 aa25.25■■□□□ 1.63
VPS72-201ENST00000354473 PALLDQ8WX93 1383 aa25.24■■□□□ 1.63
VPS72-201ENST00000354473 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
VPS72-201ENST00000354473 KCNQ4P56696 695 aa25.23■■□□□ 1.63
VPS72-201ENST00000354473 LRP5O75197 1615 aa25.22■■□□□ 1.63
VPS72-201ENST00000354473 RALBP1Q15311 655 aa25.22■■□□□ 1.63
VPS72-201ENST00000354473 CCNL1Q9UK58 526 aaPredicted RBP25.22■■□□□ 1.63
VPS72-201ENST00000354473 SLC15A2Q16348 729 aa25.21■■□□□ 1.63
VPS72-201ENST00000354473 SCN11AQ9UI33 1791 aa25.21■■□□□ 1.63
VPS72-201ENST00000354473 ERVV-2B6SEH9 535 aa25.2■■□□□ 1.62
VPS72-201ENST00000354473 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
VPS72-201ENST00000354473 CASZ1Q86V15 1759 aa25.19■■□□□ 1.62
VPS72-201ENST00000354473 U2AF1L5P0DN76 240 aaPredicted RBP25.19■■□□□ 1.62
VPS72-201ENST00000354473 U2AF1Q01081 240 aaKnown RBP eCLIP25.19■■□□□ 1.62
VPS72-201ENST00000354473 MTHFSDQ2M296 383 aaKnown RBP25.19■■□□□ 1.62
VPS72-201ENST00000354473 AKAP4Q5JQC9 854 aa25.19■■□□□ 1.62
VPS72-201ENST00000354473 VIRMAQ69YN4 1812 aaKnown RBP25.18■■□□□ 1.62
VPS72-201ENST00000354473 ZNF827Q17R98 1081 aa25.18■■□□□ 1.62
VPS72-201ENST00000354473 C5P01031 1676 aa25.18■■□□□ 1.62
VPS72-201ENST00000354473 RSPH6AQ9H0K4 717 aa25.17■■□□□ 1.62
VPS72-201ENST00000354473 ASAP1Q9ULH1 1129 aa25.17■■□□□ 1.62
VPS72-201ENST00000354473 PRKAR2BP31323 418 aa25.16■■□□□ 1.62
VPS72-201ENST00000354473 CABP4P57796 275 aa25.16■■□□□ 1.62
VPS72-201ENST00000354473 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
VPS72-201ENST00000354473 SRCAPQ6ZRS2 3230 aa25.15■■□□□ 1.62
VPS72-201ENST00000354473 AKT1S1Q96B36 256 aa25.15■■□□□ 1.62
VPS72-201ENST00000354473 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.62
VPS72-201ENST00000354473 PDGFDQ9GZP0 370 aaPredicted RBP25.14■■□□□ 1.62
VPS72-201ENST00000354473 TUBGCP6Q96RT7 1819 aa25.14■■□□□ 1.62
VPS72-201ENST00000354473 ATG3Q9NT62 314 aa25.13■■□□□ 1.61
VPS72-201ENST00000354473 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
VPS72-201ENST00000354473 MYBBP1AQ9BQG0 1328 aaKnown RBP25.13■■□□□ 1.61
VPS72-201ENST00000354473 QSER1Q2KHR3 1735 aa25.13■■□□□ 1.61
VPS72-201ENST00000354473 GAS2L2Q8NHY3 880 aa25.12■■□□□ 1.61
VPS72-201ENST00000354473 PHACTR3Q96KR7 559 aa25.12■■□□□ 1.61
VPS72-201ENST00000354473 RNMTO43148 476 aaKnown RBP25.12■■□□□ 1.61
VPS72-201ENST00000354473 FCHSD2O94868 740 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms