RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TUBGCP6Q96RT7 1819 aa22.66■■□□□ 1.22
DDX55-202ENST00000354291 ZCRB1Q8TBF4 217 aaKnown RBP22.65■■□□□ 1.22
DDX55-202ENST00000354291 ADCY9O60503 1353 aa22.64■■□□□ 1.22
DDX55-202ENST00000354291 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.21
DDX55-202ENST00000354291 NSD2O96028 1365 aa22.63■■□□□ 1.21
DDX55-202ENST00000354291 USP47Q96K76 1375 aa22.63■■□□□ 1.21
DDX55-202ENST00000354291 KIF3CO14782 793 aa22.62■■□□□ 1.21
DDX55-202ENST00000354291 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
DDX55-202ENST00000354291 APLP1P51693 650 aa22.61■■□□□ 1.21
DDX55-202ENST00000354291 FLAD1Q8NFF5 587 aa22.61■■□□□ 1.21
DDX55-202ENST00000354291 SBNO2Q9Y2G9 1366 aa22.61■■□□□ 1.21
DDX55-202ENST00000354291 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
DDX55-202ENST00000354291 LTN1O94822 1766 aa22.6■■□□□ 1.21
DDX55-202ENST00000354291 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
DDX55-202ENST00000354291 ROCK2O75116 1388 aaKnown RBP22.59■■□□□ 1.21
DDX55-202ENST00000354291 AMPHP49418 695 aa22.56■■□□□ 1.2
DDX55-202ENST00000354291 DNAJC5GQ8N7S2 189 aa22.56■■□□□ 1.2
DDX55-202ENST00000354291 LY75O60449 1722 aa22.56■■□□□ 1.2
DDX55-202ENST00000354291 FBLN1P23142 703 aa22.54■■□□□ 1.2
DDX55-202ENST00000354291 SMIM5Q71RC9 77 aa22.54■■□□□ 1.2
DDX55-202ENST00000354291 TERF2IPQ9NYB0 399 aa22.54■■□□□ 1.2
DDX55-202ENST00000354291 MON2Q7Z3U7 1717 aa22.54■■□□□ 1.2
DDX55-202ENST00000354291 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
DDX55-202ENST00000354291 PHF14O94880 888 aa22.53■■□□□ 1.2
DDX55-202ENST00000354291 HMGB2P26583 209 aaKnown RBP22.53■■□□□ 1.2
DDX55-202ENST00000354291 HOXC9P31274 260 aa22.53■■□□□ 1.2
DDX55-202ENST00000354291 AK7Q96M32 723 aa22.53■■□□□ 1.2
DDX55-202ENST00000354291 CD163L1Q9NR16 1453 aa22.53■■□□□ 1.2
DDX55-202ENST00000354291 MPRIPQ6WCQ1 1025 aa22.52■■□□□ 1.2
DDX55-202ENST00000354291 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
DDX55-202ENST00000354291 EDC4Q6P2E9 1401 aaKnown RBP22.51■■□□□ 1.19
DDX55-202ENST00000354291 CAPN15O75808 1086 aa22.51■■□□□ 1.19
DDX55-202ENST00000354291 TOMM70O94826 608 aa22.51■■□□□ 1.19
DDX55-202ENST00000354291 USHBP1Q8N6Y0 703 aa22.51■■□□□ 1.19
DDX55-202ENST00000354291 AMIGO3Q86WK7 504 aa22.5■■□□□ 1.19
DDX55-202ENST00000354291 MEGF6O75095 1541 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 NBPF6Q5VWK0 638 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 RAPGEF4Q8WZA2 1011 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 COG3Q96JB2 828 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 NBPF4Q96M43 638 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
DDX55-202ENST00000354291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
DDX55-202ENST00000354291 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
DDX55-202ENST00000354291 USP54Q70EL1 1684 aa22.48■■□□□ 1.19
DDX55-202ENST00000354291 NEUROD1Q13562 356 aa22.47■■□□□ 1.19
DDX55-202ENST00000354291 COL13A1Q5TAT6 717 aaPredicted RBP22.47■■□□□ 1.19
DDX55-202ENST00000354291 A0A1W2PP64 1363 aa22.46■■□□□ 1.19
DDX55-202ENST00000354291 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
DDX55-202ENST00000354291 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
DDX55-202ENST00000354291 HTRA3P83110 453 aa22.44■■□□□ 1.18
DDX55-202ENST00000354291 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
DDX55-202ENST00000354291 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
DDX55-202ENST00000354291 ARHGAP27Q6ZUM4 889 aa22.43■■□□□ 1.18
DDX55-202ENST00000354291 BCS1LQ9Y276 419 aa22.43■■□□□ 1.18
DDX55-202ENST00000354291 C5P01031 1676 aa22.42■■□□□ 1.18
DDX55-202ENST00000354291 FAM208AQ9UK61 1670 aaKnown RBP22.42■■□□□ 1.18
DDX55-202ENST00000354291 RRS1Q15050 365 aaKnown RBP22.42■■□□□ 1.18
DDX55-202ENST00000354291 CARD11Q9BXL7 1154 aa22.41■■□□□ 1.18
DDX55-202ENST00000354291 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
DDX55-202ENST00000354291 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
DDX55-202ENST00000354291 SSFA2P28290 1259 aa22.4■■□□□ 1.18
DDX55-202ENST00000354291 C16orf71Q8IYS4 520 aaPredicted RBP22.4■■□□□ 1.18
DDX55-202ENST00000354291 KLRG1Q96E93 195 aa22.4■■□□□ 1.18
DDX55-202ENST00000354291 RGPD2P0DJD1 1756 aa22.4■■□□□ 1.18
DDX55-202ENST00000354291 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
DDX55-202ENST00000354291 PCNTO95613 3336 aa22.39■■□□□ 1.17
DDX55-202ENST00000354291 CYP27B1O15528 508 aa22.38■■□□□ 1.17
DDX55-202ENST00000354291 MMP10P09238 476 aa22.38■■□□□ 1.17
DDX55-202ENST00000354291 TNS4Q8IZW8 715 aa22.38■■□□□ 1.17
DDX55-202ENST00000354291 PIGBQ92521 554 aa22.38■■□□□ 1.17
DDX55-202ENST00000354291 LINC00116Q8NCU8 138 aa22.37■■□□□ 1.17
DDX55-202ENST00000354291 RBM46Q8TBY0 533 aaKnown RBP22.37■■□□□ 1.17
DDX55-202ENST00000354291 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
DDX55-202ENST00000354291 GNPATO15228 680 aa22.36■■□□□ 1.17
DDX55-202ENST00000354291 NSD3Q9BZ95 1437 aa22.36■■□□□ 1.17
DDX55-202ENST00000354291 LOC102724428A0A0B4J2F2 783 aa22.35■■□□□ 1.17
DDX55-202ENST00000354291 SIK1P57059 783 aa22.35■■□□□ 1.17
DDX55-202ENST00000354291 TGFB2P61812 414 aa22.35■■□□□ 1.17
DDX55-202ENST00000354291 TAF1LQ8IZX4 1826 aa22.35■■□□□ 1.17
DDX55-202ENST00000354291 FCHSD2O94868 740 aa22.34■■□□□ 1.17
DDX55-202ENST00000354291 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
DDX55-202ENST00000354291 PUS7Q96PZ0 661 aaKnown RBP22.34■■□□□ 1.17
DDX55-202ENST00000354291 SMG6Q86US8 1419 aaKnown RBP22.33■■□□□ 1.17
DDX55-202ENST00000354291 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.17
DDX55-202ENST00000354291 PRELPP51888 382 aa22.32■■□□□ 1.16
DDX55-202ENST00000354291 C9orf131Q5VYM1 1079 aa22.32■■□□□ 1.16
DDX55-202ENST00000354291 GGNBP2Q9H3C7 697 aa22.32■■□□□ 1.16
DDX55-202ENST00000354291 RTL1A6NKG5 1358 aa22.32■■□□□ 1.16
DDX55-202ENST00000354291 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
DDX55-202ENST00000354291 DPEP1P16444 411 aa22.31■■□□□ 1.16
DDX55-202ENST00000354291 ATP6V1AP38606 617 aa22.31■■□□□ 1.16
DDX55-202ENST00000354291 ITPK1Q13572 414 aa22.31■■□□□ 1.16
DDX55-202ENST00000354291 FSTL1Q12841 308 aa22.3■■□□□ 1.16
DDX55-202ENST00000354291 ASAP1Q9ULH1 1129 aa22.3■■□□□ 1.16
DDX55-202ENST00000354291 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
DDX55-202ENST00000354291 UBR3Q6ZT12 1888 aa22.29■■□□□ 1.16
DDX55-202ENST00000354291 TMF1P82094 1093 aa22.29■■□□□ 1.16
DDX55-202ENST00000354291 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
DDX55-202ENST00000354291 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
DDX55-202ENST00000354291 NLGN1Q8N2Q7 840 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms