RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ZBTB22O15209 634 aa17.09■□□□□ 0.33
SPPL3-201ENST00000353487 CCDC192P0DO97 292 aa17.09■□□□□ 0.33
SPPL3-201ENST00000353487 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
SPPL3-201ENST00000353487 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
SPPL3-201ENST00000353487 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.33
SPPL3-201ENST00000353487 MCM2P49736 904 aa17.08■□□□□ 0.32
SPPL3-201ENST00000353487 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.32
SPPL3-201ENST00000353487 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
SPPL3-201ENST00000353487 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
SPPL3-201ENST00000353487 TMEM63CQ9P1W3 806 aa17.08■□□□□ 0.32
SPPL3-201ENST00000353487 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 UBXN4Q92575 508 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 LMAN1P49257 510 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 PDILTQ8N807 584 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 ZBTB40Q9NUA8 1239 aa17.07■□□□□ 0.32
SPPL3-201ENST00000353487 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 EIF2S2P20042 333 aaKnown RBP17.06■□□□□ 0.32
SPPL3-201ENST00000353487 SDSP20132 328 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 KRT222Q8N1A0 295 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 LMBRD1Q9NUN5 540 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
SPPL3-201ENST00000353487 MNAT1P51948 309 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
SPPL3-201ENST00000353487 STK3Q13188 491 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 TMCO3Q6UWJ1 677 aa17.06■□□□□ 0.32
SPPL3-201ENST00000353487 ADGRF5Q8IZF2 1346 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 HS1BP3Q53T59 392 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 TRAPPC8Q9Y2L5 1435 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 CCDC102AQ96A19 550 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
SPPL3-201ENST00000353487 SMC2O95347 1197 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 CCDC183Q5T5S1 534 aa17.05■□□□□ 0.32
SPPL3-201ENST00000353487 OTUD7AQ8TE49 926 aaPredicted RBP17.05■□□□□ 0.32
SPPL3-201ENST00000353487 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
SPPL3-201ENST00000353487 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
SPPL3-201ENST00000353487 FAM193AP78312 1265 aa17.04■□□□□ 0.32
SPPL3-201ENST00000353487 CNPY2Q9Y2B0 182 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 ZNF445P59923 1031 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 CCDC83Q8IWF9 413 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 ITSN2Q9NZM3 1697 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
SPPL3-201ENST00000353487 PTPN14Q15678 1187 aa17.02■□□□□ 0.32
SPPL3-201ENST00000353487 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.32
SPPL3-201ENST00000353487 F6X3S4 739 aa17.02■□□□□ 0.32
SPPL3-201ENST00000353487 ABCC10Q5T3U5 1492 aa17.02■□□□□ 0.31
SPPL3-201ENST00000353487 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.31
SPPL3-201ENST00000353487 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
SPPL3-201ENST00000353487 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
SPPL3-201ENST00000353487 TICAM2Q86XR7 235 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 COG3Q96JB2 828 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 NUP62CLQ9H1M0 184 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
SPPL3-201ENST00000353487 TSPYL6Q8N831 410 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
SPPL3-201ENST00000353487 ATAD2Q6PL18 1390 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 MBD5Q9P267 1494 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 MYRIPQ8NFW9 859 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 ADGRL2O95490 1459 aa17■□□□□ 0.31
SPPL3-201ENST00000353487 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 CCDC186Q7Z3E2 898 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
SPPL3-201ENST00000353487 DMTNQ08495 405 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 RIOK3O14730 519 aaKnown RBP16.99■□□□□ 0.31
SPPL3-201ENST00000353487 ZNF500O60304 480 aaPredicted RBP16.99■□□□□ 0.31
SPPL3-201ENST00000353487 GADD45BO75293 160 aaPredicted RBP16.99■□□□□ 0.31
SPPL3-201ENST00000353487 ASXL1Q8IXJ9 1541 aa16.99■□□□□ 0.31
SPPL3-201ENST00000353487 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 RUFY1Q96T51 708 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 RSPH14Q9UHP6 348 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 CCDC191Q8NCU4 936 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 COL17A1Q9UMD9 1497 aaPredicted RBP16.98■□□□□ 0.31
SPPL3-201ENST00000353487 URI1O94763 535 aaPredicted RBP16.98■□□□□ 0.31
SPPL3-201ENST00000353487 KRT85P78386 507 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 MAP3K11Q16584 847 aa16.98■□□□□ 0.31
SPPL3-201ENST00000353487 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 ACBD3Q9H3P7 528 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 CASTP20810 708 aaKnown RBP16.97■□□□□ 0.31
SPPL3-201ENST00000353487 PTGS1P23219 599 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms