RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
TRAF3-202ENST00000351691 PRIMPOLQ96LW4 560 aa18.34■□□□□ 0.53
TRAF3-202ENST00000351691 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
TRAF3-202ENST00000351691 RIMS1Q86UR5 1692 aaKnown RBP18.33■□□□□ 0.53
TRAF3-202ENST00000351691 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.53
TRAF3-202ENST00000351691 GTPBP4Q9BZE4 634 aaKnown RBP18.33■□□□□ 0.53
TRAF3-202ENST00000351691 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.52
TRAF3-202ENST00000351691 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
TRAF3-202ENST00000351691 GTF2F1P35269 517 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAF3-202ENST00000351691 FAM135BQ49AJ0 1406 aa18.32■□□□□ 0.52
TRAF3-202ENST00000351691 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
TRAF3-202ENST00000351691 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
TRAF3-202ENST00000351691 PIK3R4Q99570 1358 aa18.32■□□□□ 0.52
TRAF3-202ENST00000351691 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
TRAF3-202ENST00000351691 CPSF1Q10570 1443 aaKnown RBP18.31■□□□□ 0.52
TRAF3-202ENST00000351691 PPIP5K1Q6PFW1 1433 aa18.31■□□□□ 0.52
TRAF3-202ENST00000351691 GPT2Q8TD30 523 aa18.31■□□□□ 0.52
TRAF3-202ENST00000351691 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
TRAF3-202ENST00000351691 MBD3O95983 291 aa18.3■□□□□ 0.52
TRAF3-202ENST00000351691 ZSCAN20P17040 1043 aaPredicted RBP18.3■□□□□ 0.52
TRAF3-202ENST00000351691 KIAA2012Q0VF49 1180 aa18.3■□□□□ 0.52
TRAF3-202ENST00000351691 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
TRAF3-202ENST00000351691 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
TRAF3-202ENST00000351691 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
TRAF3-202ENST00000351691 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
TRAF3-202ENST00000351691 TNRQ92752 1358 aa18.29■□□□□ 0.52
TRAF3-202ENST00000351691 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
TRAF3-202ENST00000351691 KIF20AO95235 890 aa18.29■□□□□ 0.52
TRAF3-202ENST00000351691 WASLO00401 505 aaPredicted RBP18.28■□□□□ 0.52
TRAF3-202ENST00000351691 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
TRAF3-202ENST00000351691 TECPR2O15040 1411 aa18.28■□□□□ 0.52
TRAF3-202ENST00000351691 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
TRAF3-202ENST00000351691 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
TRAF3-202ENST00000351691 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
TRAF3-202ENST00000351691 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
TRAF3-202ENST00000351691 WAPLQ7Z5K2 1190 aa18.27■□□□□ 0.52
TRAF3-202ENST00000351691 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
TRAF3-202ENST00000351691 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
TRAF3-202ENST00000351691 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
TRAF3-202ENST00000351691 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
TRAF3-202ENST00000351691 TMEM63CQ9P1W3 806 aa18.26■□□□□ 0.51
TRAF3-202ENST00000351691 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
TRAF3-202ENST00000351691 CPS1P31327 1500 aa18.25■□□□□ 0.51
TRAF3-202ENST00000351691 PRKAR2BP31323 418 aa18.25■□□□□ 0.51
TRAF3-202ENST00000351691 ST18O60284 1047 aa18.24■□□□□ 0.51
TRAF3-202ENST00000351691 LETM1O95202 739 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-202ENST00000351691 UVSSAQ2YD98 709 aa18.24■□□□□ 0.51
TRAF3-202ENST00000351691 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
TRAF3-202ENST00000351691 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
TRAF3-202ENST00000351691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAF3-202ENST00000351691 ZDHHC9Q9Y397 364 aa18.23■□□□□ 0.51
TRAF3-202ENST00000351691 PIBF1Q8WXW3 757 aa18.23■□□□□ 0.51
TRAF3-202ENST00000351691 ADAMTSL3P82987 1691 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 SYCE3A1L190 88 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 TSPY26PQ9H489 355 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAF3-202ENST00000351691 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 IL13P35225 146 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 GNAI1P63096 354 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
TRAF3-202ENST00000351691 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
TRAF3-202ENST00000351691 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
TRAF3-202ENST00000351691 ITSN1Q15811 1721 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
TRAF3-202ENST00000351691 KLHL34Q8N239 644 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 PRDM10Q9NQV6 1147 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 METP08581 1390 aa18.21■□□□□ 0.51
TRAF3-202ENST00000351691 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.5
TRAF3-202ENST00000351691 GSPT1P15170 499 aaKnown RBP18.21■□□□□ 0.5
TRAF3-202ENST00000351691 PKP1Q13835 747 aa18.21■□□□□ 0.5
TRAF3-202ENST00000351691 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.5
TRAF3-202ENST00000351691 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.5
TRAF3-202ENST00000351691 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.5
TRAF3-202ENST00000351691 PHF14O94880 888 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 FGD1P98174 961 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 COG3Q96JB2 828 aa18.19■□□□□ 0.5
TRAF3-202ENST00000351691 ZNF853P0CG23 659 aa18.18■□□□□ 0.5
TRAF3-202ENST00000351691 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
TRAF3-202ENST00000351691 ABCC4O15439 1325 aa18.18■□□□□ 0.5
TRAF3-202ENST00000351691 NOLC1Q14978 699 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAF3-202ENST00000351691 VAMP4O75379 141 aa18.17■□□□□ 0.5
TRAF3-202ENST00000351691 TAF3Q5VWG9 929 aa18.17■□□□□ 0.5
TRAF3-202ENST00000351691 CASC1Q6TDU7 716 aa18.17■□□□□ 0.5
TRAF3-202ENST00000351691 NME9Q86XW9 330 aa18.17■□□□□ 0.5
TRAF3-202ENST00000351691 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
TRAF3-202ENST00000351691 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
TRAF3-202ENST00000351691 MCM2P49736 904 aa18.16■□□□□ 0.5
TRAF3-202ENST00000351691 DNTTIP2Q5QJE6 756 aaKnown RBP18.16■□□□□ 0.5
TRAF3-202ENST00000351691 KIF3AQ9Y496 699 aa18.16■□□□□ 0.5
TRAF3-202ENST00000351691 EMILIN1Q9Y6C2 1016 aa18.16■□□□□ 0.5
TRAF3-202ENST00000351691 A0A0U1RQG5 324 aaPredicted RBP18.15■□□□□ 0.5
TRAF3-202ENST00000351691 FKBP5Q13451 457 aaPredicted RBP18.15■□□□□ 0.5
TRAF3-202ENST00000351691 TXNDC2Q86VQ3 553 aa18.15■□□□□ 0.5
TRAF3-202ENST00000351691 ZGPATQ8N5A5 531 aaKnown RBP18.15■□□□□ 0.5
TRAF3-202ENST00000351691 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms