RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 KIF16BQ96L93 1317 aa29.94■■■□□ 2.38
USP25-203ENST00000351097 KCNH5Q8NCM2 988 aa29.94■■■□□ 2.38
USP25-203ENST00000351097 KDM4FA0A1W2PPD8 638 aa29.93■■■□□ 2.38
USP25-203ENST00000351097 IP6K1Q92551 441 aa29.93■■■□□ 2.38
USP25-203ENST00000351097 KIF1AQ12756 1690 aa29.92■■■□□ 2.38
USP25-203ENST00000351097 BRPF1P55201 1214 aaPredicted RBP29.92■■■□□ 2.38
USP25-203ENST00000351097 LTV1Q96GA3 475 aaPredicted RBP29.92■■■□□ 2.38
USP25-203ENST00000351097 NCOA3Q9Y6Q9 1424 aa29.92■■■□□ 2.38
USP25-203ENST00000351097 DDX19BQ9UMR2 479 aa29.91■■■□□ 2.38
USP25-203ENST00000351097 MST1RQ04912 1400 aa29.91■■■□□ 2.38
USP25-203ENST00000351097 TRPM3Q9HCF6 1732 aaPredicted RBP29.91■■■□□ 2.38
USP25-203ENST00000351097 ATF3P18847 181 aa29.9■■■□□ 2.38
USP25-203ENST00000351097 KRT28Q7Z3Y7 464 aa29.9■■■□□ 2.38
USP25-203ENST00000351097 C8orf58Q8NAV2 365 aa29.9■■■□□ 2.38
USP25-203ENST00000351097 DCCP43146 1447 aa29.9■■■□□ 2.38
USP25-203ENST00000351097 ELL2O00472 640 aaPredicted RBP29.9■■■□□ 2.38
USP25-203ENST00000351097 CHL1O00533 1208 aa29.89■■■□□ 2.38
USP25-203ENST00000351097 TWISTNBQ3B726 338 aaPredicted RBP29.89■■■□□ 2.38
USP25-203ENST00000351097 UPF2Q9HAU5 1272 aaKnown RBP29.89■■■□□ 2.38
USP25-203ENST00000351097 IPO8O15397 1037 aaKnown RBP29.88■■■□□ 2.37
USP25-203ENST00000351097 SLIT3O75094 1523 aa29.88■■■□□ 2.37
USP25-203ENST00000351097 CRB1P82279 1406 aa29.88■■■□□ 2.37
USP25-203ENST00000351097 BECN1Q14457 450 aa29.88■■■□□ 2.37
USP25-203ENST00000351097 GAS2L2Q8NHY3 880 aa29.88■■■□□ 2.37
USP25-203ENST00000351097 GCP02774 474 aa29.87■■■□□ 2.37
USP25-203ENST00000351097 HDAC1Q13547 482 aaPredicted RBP29.87■■■□□ 2.37
USP25-203ENST00000351097 LMTK3Q96Q04 1460 aa29.87■■■□□ 2.37
USP25-203ENST00000351097 ITPRIPQ8IWB1 547 aa29.87■■■□□ 2.37
USP25-203ENST00000351097 MRPL50Q8N5N7 158 aaKnown RBP29.87■■■□□ 2.37
USP25-203ENST00000351097 PHRF1Q9P1Y6 1649 aaKnown RBP29.86■■■□□ 2.37
USP25-203ENST00000351097 LMOD2Q6P5Q4 547 aa29.85■■■□□ 2.37
USP25-203ENST00000351097 RTF1Q92541 710 aaKnown RBP29.84■■■□□ 2.37
USP25-203ENST00000351097 GSE1Q14687 1217 aa29.83■■■□□ 2.37
USP25-203ENST00000351097 ARHGEF25Q86VW2 580 aa29.83■■■□□ 2.37
USP25-203ENST00000351097 TBC1D32Q96NH3 1257 aa29.83■■■□□ 2.37
USP25-203ENST00000351097 ZBTB7CA1YPR0 619 aa29.82■■■□□ 2.36
USP25-203ENST00000351097 TMEM57Q8N5G2 664 aa29.82■■■□□ 2.36
USP25-203ENST00000351097 USHBP1Q8N6Y0 703 aa29.82■■■□□ 2.36
USP25-203ENST00000351097 CADPS2Q86UW7 1296 aa29.8■■■□□ 2.36
USP25-203ENST00000351097 HTATSF1O43719 755 aaKnown RBP29.8■■■□□ 2.36
USP25-203ENST00000351097 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
USP25-203ENST00000351097 NBPF6Q5VWK0 638 aa29.8■■■□□ 2.36
USP25-203ENST00000351097 ARHGAP45Q92619 1136 aa29.8■■■□□ 2.36
USP25-203ENST00000351097 NBPF4Q96M43 638 aa29.8■■■□□ 2.36
USP25-203ENST00000351097 KIAA0232Q92628 1395 aa29.79■■■□□ 2.36
USP25-203ENST00000351097 KRT24Q2M2I5 525 aa29.79■■■□□ 2.36
USP25-203ENST00000351097 STRCQ7RTU9 1775 aa29.78■■■□□ 2.36
USP25-203ENST00000351097 ZBTB40Q9NUA8 1239 aa29.78■■■□□ 2.36
USP25-203ENST00000351097 ALS2Q96Q42 1657 aa29.78■■■□□ 2.36
USP25-203ENST00000351097 FRAT2O75474 233 aaPredicted RBP29.77■■■□□ 2.36
USP25-203ENST00000351097 GNAT3A8MTJ3 354 aa29.77■■■□□ 2.36
USP25-203ENST00000351097 SMC5Q8IY18 1101 aa29.77■■■□□ 2.36
USP25-203ENST00000351097 DDX17Q92841 729 aaKnown RBP29.77■■■□□ 2.36
USP25-203ENST00000351097 MSH6P52701 1360 aa29.77■■■□□ 2.36
USP25-203ENST00000351097 MIS18AQ9NYP9 233 aa29.76■■■□□ 2.35
USP25-203ENST00000351097 LRRC37A3O60309 1634 aa29.74■■■□□ 2.35
USP25-203ENST00000351097 MAP3K5Q99683 1374 aa29.74■■■□□ 2.35
USP25-203ENST00000351097 LRRC59Q96AG4 307 aaKnown RBP29.73■■■□□ 2.35
USP25-203ENST00000351097 HAP1P54257 671 aaPredicted RBP29.73■■■□□ 2.35
USP25-203ENST00000351097 MED1Q15648 1581 aaPredicted RBP29.72■■■□□ 2.35
USP25-203ENST00000351097 TSPYL4Q9UJ04 414 aa29.72■■■□□ 2.35
USP25-203ENST00000351097 XIRP1Q702N8 1843 aaKnown RBP29.72■■■□□ 2.35
USP25-203ENST00000351097 NPHP3Q7Z494 1330 aa29.7■■■□□ 2.35
USP25-203ENST00000351097 IL17REQ8NFR9 667 aa29.7■■■□□ 2.35
USP25-203ENST00000351097 AXIN2Q9Y2T1 843 aa29.7■■■□□ 2.34
USP25-203ENST00000351097 RGPD2P0DJD1 1756 aa29.69■■■□□ 2.34
USP25-203ENST00000351097 ABCC4O15439 1325 aa29.69■■■□□ 2.34
USP25-203ENST00000351097 NCAPD2Q15021 1401 aa29.68■■■□□ 2.34
USP25-203ENST00000351097 ANKRD24Q8TF21 1146 aa29.68■■■□□ 2.34
USP25-203ENST00000351097 API5Q9BZZ5 524 aaKnown RBP29.66■■■□□ 2.34
USP25-203ENST00000351097 TBC1D2Q9BYX2 928 aa29.66■■■□□ 2.34
USP25-203ENST00000351097 ZC3H6P61129 1189 aaKnown RBP29.65■■■□□ 2.34
USP25-203ENST00000351097 ZNF335Q9H4Z2 1342 aaPredicted RBP29.65■■■□□ 2.34
USP25-203ENST00000351097 PXDNQ92626 1479 aa29.65■■■□□ 2.34
USP25-203ENST00000351097 SLKQ9H2G2 1235 aaPredicted RBP29.64■■■□□ 2.34
USP25-203ENST00000351097 ZBTB7BO15156 539 aaPredicted RBP29.64■■■□□ 2.34
USP25-203ENST00000351097 NUCB1Q02818 461 aa29.64■■■□□ 2.34
USP25-203ENST00000351097 ANTXR1Q9H6X2 564 aa29.64■■■□□ 2.34
USP25-203ENST00000351097 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
USP25-203ENST00000351097 CHMP4BQ9H444 224 aaKnown RBP29.63■■■□□ 2.33
USP25-203ENST00000351097 C22orf23Q9BZE7 217 aa29.62■■■□□ 2.33
USP25-203ENST00000351097 CEMIPQ8WUJ3 1361 aa29.61■■■□□ 2.33
USP25-203ENST00000351097 CAMTA1Q9Y6Y1 1673 aa29.61■■■□□ 2.33
USP25-203ENST00000351097 MFAP1P55081 439 aaKnown RBP29.6■■■□□ 2.33
USP25-203ENST00000351097 TAF7Q15545 349 aaPredicted RBP29.6■■■□□ 2.33
USP25-203ENST00000351097 BRINP3Q76B58 766 aa29.6■■■□□ 2.33
USP25-203ENST00000351097 BABAM1Q9NWV8 329 aa29.6■■■□□ 2.33
USP25-203ENST00000351097 RGS12O14924 1447 aa29.6■■■□□ 2.33
USP25-203ENST00000351097 ERBB3P21860 1342 aa29.6■■■□□ 2.33
USP25-203ENST00000351097 SPATA31A3Q5VYP0 1347 aa29.59■■■□□ 2.33
USP25-203ENST00000351097 PLEKHO1Q53GL0 409 aaPredicted RBP29.58■■■□□ 2.33
USP25-203ENST00000351097 CABLES1Q8TDN4 633 aa29.57■■■□□ 2.32
USP25-203ENST00000351097 CHD1LQ86WJ1 897 aa29.57■■■□□ 2.32
USP25-203ENST00000351097 RGPD5Q99666 1765 aa29.57■■■□□ 2.32
USP25-203ENST00000351097 SLC4A2P04920 1241 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 AMOTQ4VCS5 1084 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 IL27Q8NEV9 243 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 PTPRCP08575 1304 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 AKAP4Q5JQC9 854 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 ZNF530Q6P9A1 599 aaPredicted RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms