RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 CAMKK2Q96RR4 588 aa35.09■■■■□ 3.21
H2AFV-204ENST00000350771 PLEKHG2Q9H7P9 1386 aa35.09■■■■□ 3.21
H2AFV-204ENST00000350771 RAPGEF4Q8WZA2 1011 aa35.08■■■■□ 3.21
H2AFV-204ENST00000350771 PKD1L3Q7Z443 1732 aa35.08■■■■□ 3.21
H2AFV-204ENST00000350771 PSDA5PKW4 1024 aaPredicted RBP35.07■■■■□ 3.2
H2AFV-204ENST00000350771 DDX10Q13206 875 aaKnown RBP35.07■■■■□ 3.2
H2AFV-204ENST00000350771 COL3A1P02461 1466 aaPredicted RBP35.07■■■■□ 3.2
H2AFV-204ENST00000350771 IL13P35225 146 aa35.06■■■■□ 3.2
H2AFV-204ENST00000350771 LRP5O75197 1615 aa35.06■■■■□ 3.2
H2AFV-204ENST00000350771 TATP17735 454 aaPredicted RBP35.04■■■■□ 3.2
H2AFV-204ENST00000350771 CNGB1Q14028 1251 aaPredicted RBP35.04■■■■□ 3.2
H2AFV-204ENST00000350771 ZCRB1Q8TBF4 217 aaKnown RBP35.04■■■■□ 3.2
H2AFV-204ENST00000350771 RREB1Q92766 1687 aa35.01■■■■□ 3.19
H2AFV-204ENST00000350771 KDRP35968 1356 aa35■■■■□ 3.19
H2AFV-204ENST00000350771 PPP2R1AP30153 589 aa35■■■■□ 3.19
H2AFV-204ENST00000350771 NHSQ6T4R5 1651 aa34.99■■■■□ 3.19
H2AFV-204ENST00000350771 R3HDM1Q15032 1099 aaKnown RBP34.99■■■■□ 3.19
H2AFV-204ENST00000350771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.97■■■■□ 3.192e-6■□□□□ 8.4
H2AFV-204ENST00000350771 DDX54Q8TDD1 881 aaKnown RBP34.95■■■■□ 3.19
H2AFV-204ENST00000350771 BCL11BQ9C0K0 894 aaPredicted RBP34.95■■■■□ 3.19
H2AFV-204ENST00000350771 ZNF316A6NFI3 1004 aaPredicted RBP34.94■■■■□ 3.18
H2AFV-204ENST00000350771 DIAPH1O60610 1272 aaKnown RBP34.94■■■■□ 3.18
H2AFV-204ENST00000350771 PCDH11XQ9BZA7 1347 aa34.94■■■■□ 3.18
H2AFV-204ENST00000350771 PCDH11YQ9BZA8 1340 aa34.94■■■■□ 3.18
H2AFV-204ENST00000350771 NUP188Q5SRE5 1749 aa34.94■■■■□ 3.18
H2AFV-204ENST00000350771 RGPD3A6NKT7 1758 aaPredicted RBP34.94■■■■□ 3.18
H2AFV-204ENST00000350771 RGPD4Q7Z3J3 1758 aa34.94■■■■□ 3.18
H2AFV-204ENST00000350771 NBPF14Q5TI25 921 aa34.93■■■■□ 3.18
H2AFV-204ENST00000350771 AEBP1Q8IUX7 1158 aa34.91■■■■□ 3.18
H2AFV-204ENST00000350771 DOT1LQ8TEK3 1739 aa34.89■■■■□ 3.18
H2AFV-204ENST00000350771 CYP27B1O15528 508 aa34.89■■■■□ 3.18
H2AFV-204ENST00000350771 RALBP1Q15311 655 aa34.89■■■■□ 3.18
H2AFV-204ENST00000350771 PTF1AQ7RTS3 328 aa34.89■■■■□ 3.18
H2AFV-204ENST00000350771 SPG7Q9UQ90 795 aa34.89■■■■□ 3.18
H2AFV-204ENST00000350771 SULT6B1Q6IMI4 303 aa34.88■■■■□ 3.17
H2AFV-204ENST00000350771 PLSCR1O15162 318 aa34.87■■■■□ 3.17
H2AFV-204ENST00000350771 CFAP53Q96M91 514 aa34.87■■■■□ 3.17
H2AFV-204ENST00000350771 KAT6BQ8WYB5 2073 aa34.86■■■■□ 3.17
H2AFV-204ENST00000350771 KCNQ2O43526 872 aa34.85■■■■□ 3.17
H2AFV-204ENST00000350771 BTAF1O14981 1849 aa34.84■■■■□ 3.17
H2AFV-204ENST00000350771 NKX1-1Q15270 411 aaPredicted RBP34.84■■■■□ 3.17
H2AFV-204ENST00000350771 ACSBG1Q96GR2 724 aa34.83■■■■□ 3.17
H2AFV-204ENST00000350771 TOGARAM1Q9Y4F4 1720 aa34.82■■■■□ 3.16
H2AFV-204ENST00000350771 AMOTQ4VCS5 1084 aa34.81■■■■□ 3.16
H2AFV-204ENST00000350771 PHKG2P15735 406 aa34.79■■■■□ 3.16
H2AFV-204ENST00000350771 PLEKHO1Q53GL0 409 aaPredicted RBP34.79■■■■□ 3.16
H2AFV-204ENST00000350771 IFNL2Q8IZJ0 200 aa34.78■■■■□ 3.16
H2AFV-204ENST00000350771 HMOX1P09601 288 aa34.76■■■■□ 3.16
H2AFV-204ENST00000350771 PRIM1P49642 420 aaKnown RBP34.75■■■■□ 3.15
H2AFV-204ENST00000350771 ITGB4P16144 1822 aa34.74■■■■□ 3.15
H2AFV-204ENST00000350771 NUDCQ9Y266 331 aa34.74■■■■□ 3.15
H2AFV-204ENST00000350771 MYBBP1AQ9BQG0 1328 aaKnown RBP34.74■■■■□ 3.15
H2AFV-204ENST00000350771 U2SURPO15042 1029 aaKnown RBP34.73■■■■□ 3.15
H2AFV-204ENST00000350771 PRKRIP1Q9H875 184 aaPredicted RBP34.73■■■■□ 3.15
H2AFV-204ENST00000350771 ZNF530Q6P9A1 599 aaPredicted RBP34.7■■■■□ 3.15
H2AFV-204ENST00000350771 HSP90AB1P08238 724 aaKnown RBP34.68■■■■□ 3.14
H2AFV-204ENST00000350771 PROM2Q8N271 834 aa34.68■■■■□ 3.14
H2AFV-204ENST00000350771 SYTL4Q96C24 671 aaPredicted RBP34.67■■■■□ 3.14
H2AFV-204ENST00000350771 RSPH6AQ9H0K4 717 aa34.67■■■■□ 3.14
H2AFV-204ENST00000350771 LY75O60449 1722 aa34.67■■■■□ 3.14
H2AFV-204ENST00000350771 KDM6AO15550 1401 aaPredicted RBP34.66■■■■□ 3.14
H2AFV-204ENST00000350771 DCAF5Q96JK2 942 aa34.65■■■■□ 3.14
H2AFV-204ENST00000350771 TXNRD1Q16881 649 aa34.64■■■■□ 3.14
H2AFV-204ENST00000350771 ADAMTS7Q9UKP4 1686 aa34.63■■■■□ 3.13
H2AFV-204ENST00000350771 FCHSD2O94868 740 aa34.63■■■■□ 3.13
H2AFV-204ENST00000350771 U2AF1L5P0DN76 240 aaPredicted RBP34.63■■■■□ 3.13
H2AFV-204ENST00000350771 U2AF1Q01081 240 aaKnown RBP eCLIP34.63■■■■□ 3.138e-7■□□□□ 8.6
H2AFV-204ENST00000350771 SPON1Q9HCB6 807 aa34.63■■■■□ 3.13
H2AFV-204ENST00000350771 SCN11AQ9UI33 1791 aa34.63■■■■□ 3.13
H2AFV-204ENST00000350771 MTHFSDQ2M296 383 aaKnown RBP34.62■■■■□ 3.13
H2AFV-204ENST00000350771 AKAP4Q5JQC9 854 aa34.62■■■■□ 3.13
H2AFV-204ENST00000350771 C1orf141Q5JVX7 400 aa34.62■■■■□ 3.13
H2AFV-204ENST00000350771 ERVV-2B6SEH9 535 aa34.6■■■■□ 3.13
H2AFV-204ENST00000350771 ANO8Q9HCE9 1232 aaPredicted RBP34.6■■■■□ 3.13
H2AFV-204ENST00000350771 PAPPAQ13219 1627 aa34.59■■■■□ 3.13
H2AFV-204ENST00000350771 PRKAR2BP31323 418 aa34.59■■■■□ 3.13
H2AFV-204ENST00000350771 MPRIPQ6WCQ1 1025 aa34.59■■■■□ 3.13
H2AFV-204ENST00000350771 PIGBQ92521 554 aa34.59■■■■□ 3.13
H2AFV-204ENST00000350771 VIRMAQ69YN4 1812 aaKnown RBP34.58■■■■□ 3.13
H2AFV-204ENST00000350771 STK32BQ9NY57 414 aa34.57■■■■□ 3.12
H2AFV-204ENST00000350771 CASZ1Q86V15 1759 aa34.55■■■■□ 3.12
H2AFV-204ENST00000350771 SLC27A3Q5K4L6 730 aa34.55■■■■□ 3.12
H2AFV-204ENST00000350771 GAS2L2Q8NHY3 880 aa34.55■■■■□ 3.12
H2AFV-204ENST00000350771 PHACTR3Q96KR7 559 aa34.55■■■■□ 3.12
H2AFV-204ENST00000350771 TMOD3Q9NYL9 352 aa34.55■■■■□ 3.12
H2AFV-204ENST00000350771 MRC1P22897 1456 aa34.54■■■■□ 3.12
H2AFV-204ENST00000350771 PPP1R1BQ9UD71 204 aaPredicted RBP34.54■■■■□ 3.12
H2AFV-204ENST00000350771 LRRC4BQ9NT99 713 aa34.52■■■■□ 3.12
H2AFV-204ENST00000350771 PALLDQ8WX93 1383 aa34.51■■■■□ 3.12
H2AFV-204ENST00000350771 SMARCC1Q92922 1105 aaPredicted RBP34.51■■■■□ 3.12
H2AFV-204ENST00000350771 MAP3K5Q99683 1374 aa34.5■■■■□ 3.11
H2AFV-204ENST00000350771 SLC15A2Q16348 729 aa34.5■■■■□ 3.11
H2AFV-204ENST00000350771 PLEKHF1Q96S99 279 aa34.48■■■■□ 3.11
H2AFV-204ENST00000350771 RNMTO43148 476 aaKnown RBP34.47■■■■□ 3.11
H2AFV-204ENST00000350771 CABP4P57796 275 aa34.46■■■■□ 3.11
H2AFV-204ENST00000350771 LGR6Q9HBX8 967 aa34.46■■■■□ 3.11
H2AFV-204ENST00000350771 GNAT3A8MTJ3 354 aa34.45■■■■□ 3.11
H2AFV-204ENST00000350771 ATG3Q9NT62 314 aa34.45■■■■□ 3.11
H2AFV-204ENST00000350771 ZNF831Q5JPB2 1677 aa34.44■■■■□ 3.1
H2AFV-204ENST00000350771 TAF1LQ8IZX4 1826 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms