RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
PDAP1-201ENST00000350498 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
PDAP1-201ENST00000350498 MCM4P33991 863 aa20.75■□□□□ 0.91
PDAP1-201ENST00000350498 API5Q9BZZ5 524 aaKnown RBP20.75■□□□□ 0.91
PDAP1-201ENST00000350498 RGS12O14924 1447 aa20.75■□□□□ 0.91
PDAP1-201ENST00000350498 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
PDAP1-201ENST00000350498 TBX22Q9Y458 520 aa20.75■□□□□ 0.91
PDAP1-201ENST00000350498 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
PDAP1-201ENST00000350498 MEIS3Q99687 375 aa20.74■□□□□ 0.91
PDAP1-201ENST00000350498 PANK2Q9BZ23 570 aa20.74■□□□□ 0.91
PDAP1-201ENST00000350498 SMARCA5O60264 1052 aaPredicted RBP20.74■□□□□ 0.91
PDAP1-201ENST00000350498 CRB1P82279 1406 aa20.74■□□□□ 0.91
PDAP1-201ENST00000350498 USHBP1Q8N6Y0 703 aa20.73■□□□□ 0.91
PDAP1-201ENST00000350498 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
PDAP1-201ENST00000350498 GCC1Q96CN9 775 aa20.73■□□□□ 0.91
PDAP1-201ENST00000350498 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
PDAP1-201ENST00000350498 NALCNQ8IZF0 1738 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 MSH6P52701 1360 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
PDAP1-201ENST00000350498 TBC1D9Q6ZT07 1266 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 FOXD4L1Q9NU39 408 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 RGPD1P0DJD0 1748 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
PDAP1-201ENST00000350498 CD2BP2O95400 341 aaKnown RBP20.71■□□□□ 0.91
PDAP1-201ENST00000350498 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
PDAP1-201ENST00000350498 RRAGDQ9NQL2 400 aaPredicted RBP20.71■□□□□ 0.91
PDAP1-201ENST00000350498 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
PDAP1-201ENST00000350498 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDAP1-201ENST00000350498 BMP2KLQ5H9B9 411 aa20.71■□□□□ 0.91
PDAP1-201ENST00000350498 INTS3Q68E01 1043 aaKnown RBP20.7■□□□□ 0.9
PDAP1-201ENST00000350498 THEMISQ8N1K5 641 aaPredicted RBP20.7■□□□□ 0.9
PDAP1-201ENST00000350498 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
PDAP1-201ENST00000350498 KIF2CQ99661 725 aa20.69■□□□□ 0.9
PDAP1-201ENST00000350498 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
PDAP1-201ENST00000350498 CHMP5Q9NZZ3 219 aa20.69■□□□□ 0.9
PDAP1-201ENST00000350498 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
PDAP1-201ENST00000350498 PLEKHM2Q8IWE5 1019 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 HSCBQ8IWL3 235 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 ABTB2Q8N961 1025 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
PDAP1-201ENST00000350498 PIK3C2AO00443 1686 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 SLIT1O75093 1534 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 SETD1BQ9UPS6 1966 aaKnown RBP20.68■□□□□ 0.9
PDAP1-201ENST00000350498 FLT4P35916 1363 aa20.68■□□□□ 0.9
PDAP1-201ENST00000350498 ZBTB7CA1YPR0 619 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 TRAK2O60296 914 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 CEP85Q6P2H3 762 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 DCTPP1Q9H773 170 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 SBNO1A3KN83 1393 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 TTC21AQ8NDW8 1320 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 ATP10DQ9P241 1426 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
PDAP1-201ENST00000350498 HOXC9P31274 260 aa20.66■□□□□ 0.9
PDAP1-201ENST00000350498 IGSF1Q8N6C5 1336 aa20.66■□□□□ 0.9
PDAP1-201ENST00000350498 FER1L4A9Z1Z3 1794 aa20.65■□□□□ 0.9
PDAP1-201ENST00000350498 ARHGEF10O15013 1369 aa20.65■□□□□ 0.9
PDAP1-201ENST00000350498 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
PDAP1-201ENST00000350498 ANKRD44Q8N8A2 993 aa20.65■□□□□ 0.9
PDAP1-201ENST00000350498 FMN2Q9NZ56 1722 aa20.65■□□□□ 0.9
PDAP1-201ENST00000350498 RTL1A6NKG5 1358 aa20.64■□□□□ 0.9
PDAP1-201ENST00000350498 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
PDAP1-201ENST00000350498 IL17REQ8NFR9 667 aa20.64■□□□□ 0.89
PDAP1-201ENST00000350498 KIAA0232Q92628 1395 aa20.63■□□□□ 0.89
PDAP1-201ENST00000350498 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
PDAP1-201ENST00000350498 KDRP35968 1356 aa20.62■□□□□ 0.89
PDAP1-201ENST00000350498 XPCQ01831 940 aaPredicted RBP20.62■□□□□ 0.89
PDAP1-201ENST00000350498 L1TD1Q5T7N2 865 aaKnown RBP20.62■□□□□ 0.89
PDAP1-201ENST00000350498 TSHZ3Q63HK5 1081 aa20.62■□□□□ 0.89
PDAP1-201ENST00000350498 FSD2A1L4K1 749 aa20.61■□□□□ 0.89
PDAP1-201ENST00000350498 TNPO1Q92973 898 aaKnown RBP20.6■□□□□ 0.89
PDAP1-201ENST00000350498 DDIT3P35638 169 aa20.6■□□□□ 0.89
PDAP1-201ENST00000350498 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
PDAP1-201ENST00000350498 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
PDAP1-201ENST00000350498 PTPRCP08575 1304 aa20.58■□□□□ 0.89
PDAP1-201ENST00000350498 TTC22Q5TAA0 569 aa20.58■□□□□ 0.89
PDAP1-201ENST00000350498 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.89
PDAP1-201ENST00000350498 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.88
PDAP1-201ENST00000350498 XRN1Q8IZH2 1706 aaKnown RBP20.57■□□□□ 0.88
PDAP1-201ENST00000350498 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
PDAP1-201ENST00000350498 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
PDAP1-201ENST00000350498 CDC45O75419 566 aa20.56■□□□□ 0.88
PDAP1-201ENST00000350498 PRKCSHP14314 528 aaPredicted RBP20.56■□□□□ 0.88
PDAP1-201ENST00000350498 SDSP20132 328 aa20.56■□□□□ 0.88
PDAP1-201ENST00000350498 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
PDAP1-201ENST00000350498 RPAP2Q8IXW5 612 aaPredicted RBP20.56■□□□□ 0.88
PDAP1-201ENST00000350498 NCOA3Q9Y6Q9 1424 aa20.56■□□□□ 0.88
PDAP1-201ENST00000350498 LRRC59Q96AG4 307 aaKnown RBP20.56■□□□□ 0.88
PDAP1-201ENST00000350498 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
PDAP1-201ENST00000350498 PHF8Q9UPP1 1060 aa20.56■□□□□ 0.88
PDAP1-201ENST00000350498 ESCO1Q5FWF5 840 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 NBPF6Q5VWK0 638 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 NBPF4Q96M43 638 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
PDAP1-201ENST00000350498 KIF24Q5T7B8 1368 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 FLIIQ13045 1269 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 AK9Q5TCS8 1911 aa20.55■□□□□ 0.88
PDAP1-201ENST00000350498 PNMA6EA0A0J9YXQ4 647 aa20.54■□□□□ 0.88
PDAP1-201ENST00000350498 KCNQ3O43525 872 aa20.54■□□□□ 0.88
PDAP1-201ENST00000350498 HSP90AA1P07900 732 aaKnown RBP20.54■□□□□ 0.88
PDAP1-201ENST00000350498 SNX21Q969T3 373 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms