RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CNTROBQ8N137 903 aa14.82□□□□□ -0.04
SMAD9-201ENST00000350148 LTKP29376 864 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 AATKQ6ZMQ8 1374 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 SYAP1Q96A49 352 aaPredicted RBP14.81□□□□□ -0.04
SMAD9-201ENST00000350148 HYPKQ9NX55 129 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 CEP152O94986 1710 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 SURF6O75683 361 aaKnown RBP14.81□□□□□ -0.04
SMAD9-201ENST00000350148 IP6K1Q92551 441 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 PLEKHH1Q9ULM0 1364 aa14.81□□□□□ -0.04
SMAD9-201ENST00000350148 HSP90AB2PQ58FF8 381 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-201ENST00000350148 C22orf23Q9BZE7 217 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 LRRCC1Q9C099 1032 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
SMAD9-201ENST00000350148 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 LARP1Q6PKG0 1096 aaKnown RBP14.8□□□□□ -0.04
SMAD9-201ENST00000350148 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
SMAD9-201ENST00000350148 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
SMAD9-201ENST00000350148 PPRC1Q5VV67 1664 aaKnown RBP14.79□□□□□ -0.04
SMAD9-201ENST00000350148 APPP05067 770 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 RAB11FIP3O75154 756 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 THUMPD2Q9BTF0 503 aaKnown RBP14.79□□□□□ -0.04
SMAD9-201ENST00000350148 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 STARD3NLO95772 234 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 ARID3AQ99856 593 aa14.79□□□□□ -0.04
SMAD9-201ENST00000350148 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
SMAD9-201ENST00000350148 DDX54Q8TDD1 881 aaKnown RBP14.78□□□□□ -0.04
SMAD9-201ENST00000350148 IL13P35225 146 aa14.78□□□□□ -0.04
SMAD9-201ENST00000350148 ATP6V1DQ9Y5K8 247 aa14.78□□□□□ -0.04
SMAD9-201ENST00000350148 METP08581 1390 aa14.78□□□□□ -0.04
SMAD9-201ENST00000350148 MSNP26038 577 aaKnown RBP14.78□□□□□ -0.04
SMAD9-201ENST00000350148 CALRP27797 417 aaKnown RBP14.78□□□□□ -0.04
SMAD9-201ENST00000350148 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
SMAD9-201ENST00000350148 ARHGEF10O15013 1369 aa14.78□□□□□ -0.04
SMAD9-201ENST00000350148 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.04
SMAD9-201ENST00000350148 BACH2Q9BYV9 841 aa14.77□□□□□ -0.04
SMAD9-201ENST00000350148 SLKQ9H2G2 1235 aaPredicted RBP14.77□□□□□ -0.04
SMAD9-201ENST00000350148 KIAA1210Q9ULL0 1709 aa14.77□□□□□ -0.05
SMAD9-201ENST00000350148 DCTN1Q14203 1278 aa14.77□□□□□ -0.05
SMAD9-201ENST00000350148 ARHGEF40Q8TER5 1519 aa14.77□□□□□ -0.05
SMAD9-201ENST00000350148 HOXC9P31274 260 aa14.77□□□□□ -0.05
SMAD9-201ENST00000350148 DIP2BQ9P265 1576 aa14.77□□□□□ -0.05
SMAD9-201ENST00000350148 TMOD3Q9NYL9 352 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 FRAT2O75474 233 aaPredicted RBP14.76□□□□□ -0.05
SMAD9-201ENST00000350148 TRIM27P14373 513 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 MCM2P49736 904 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 KIF24Q5T7B8 1368 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 ANKARQ7Z5J8 1434 aa14.76□□□□□ -0.05
SMAD9-201ENST00000350148 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
SMAD9-201ENST00000350148 GCP02774 474 aa14.75□□□□□ -0.05
SMAD9-201ENST00000350148 GNL2Q13823 731 aaKnown RBP14.75□□□□□ -0.05
SMAD9-201ENST00000350148 SKOR2Q2VWA4 1001 aaPredicted RBP14.75□□□□□ -0.05
SMAD9-201ENST00000350148 USHBP1Q8N6Y0 703 aa14.75□□□□□ -0.05
SMAD9-201ENST00000350148 HSP90AB3PQ58FF7 597 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 GOLGA6L6A8MZA4 724 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 ALKQ9UM73 1620 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 G3V3G9 751 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 RBM33Q96EV2 1170 aaKnown RBP14.74□□□□□ -0.05
SMAD9-201ENST00000350148 ANO2Q9NQ90 1003 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 CHMP5Q9NZZ3 219 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 TOM1O60784 492 aa14.74□□□□□ -0.05
SMAD9-201ENST00000350148 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 FLIIQ13045 1269 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 HDAC1Q13547 482 aaPredicted RBP14.73□□□□□ -0.05
SMAD9-201ENST00000350148 C1orf115Q9H7X2 142 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 DEPDC5O75140 1603 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 DLC1Q96QB1 1528 aa14.73□□□□□ -0.05
SMAD9-201ENST00000350148 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 NOL10Q9BSC4 688 aaKnown RBP14.72□□□□□ -0.05
SMAD9-201ENST00000350148 PSMA5P28066 241 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 RABEP1Q15276 862 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 EYA1Q99502 592 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 CPLX2Q6PUV4 134 aaKnown RBP14.72□□□□□ -0.05
SMAD9-201ENST00000350148 CCDC34Q96HJ3 373 aa14.72□□□□□ -0.05
SMAD9-201ENST00000350148 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-201ENST00000350148 MRPL50Q8N5N7 158 aaKnown RBP14.71□□□□□ -0.05
SMAD9-201ENST00000350148 NUCB2P80303 420 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 KIF1BPQ96EK5 621 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 EXOC5O00471 708 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 RTL1A6NKG5 1358 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-201ENST00000350148 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-201ENST00000350148 HOXB7P09629 217 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 C20orf194Q5TEA3 1177 aa14.71□□□□□ -0.05
SMAD9-201ENST00000350148 NUTM2AQ8IVF1 878 aaPredicted RBP14.71□□□□□ -0.05
SMAD9-201ENST00000350148 SRGAP3O43295 1099 aa14.71□□□□□ -0.06
SMAD9-201ENST00000350148 SNRPA1P09661 255 aaKnown RBP14.71□□□□□ -0.06
SMAD9-201ENST00000350148 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.06
SMAD9-201ENST00000350148 MTHFSDQ2M296 383 aaKnown RBP14.7□□□□□ -0.06
SMAD9-201ENST00000350148 PHF14O94880 888 aa14.7□□□□□ -0.06
SMAD9-201ENST00000350148 NFKBIBQ15653 356 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms