RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 DLG5Q8TDM6 1919 aa35.63■■■■□ 3.29
SSBP4-202ENST00000348495 TATP17735 454 aaPredicted RBP35.63■■■■□ 3.29
SSBP4-202ENST00000348495 GAS2L2Q8NHY3 880 aa35.63■■■■□ 3.29
SSBP4-202ENST00000348495 USP21Q9UK80 565 aa35.63■■■■□ 3.29
SSBP4-202ENST00000348495 OVOS2A0A0G2JMS6 1433 aa35.63■■■■□ 3.29
SSBP4-202ENST00000348495 PARP4Q9UKK3 1724 aaKnown RBP35.63■■■■□ 3.29
SSBP4-202ENST00000348495 AFF2P51816 1311 aa35.62■■■■□ 3.29
SSBP4-202ENST00000348495 VPS72Q15906 364 aa35.62■■■■□ 3.29
SSBP4-202ENST00000348495 AMOTQ4VCS5 1084 aa35.62■■■■□ 3.29
SSBP4-202ENST00000348495 TRIM35Q9UPQ4 493 aa35.62■■■■□ 3.29
SSBP4-202ENST00000348495 PLEKHO1Q53GL0 409 aaPredicted RBP35.61■■■■□ 3.29
SSBP4-202ENST00000348495 USP35Q9P2H5 1018 aa35.61■■■■□ 3.29
SSBP4-202ENST00000348495 PKD1L3Q7Z443 1732 aa35.61■■■■□ 3.29
SSBP4-202ENST00000348495 DISP2A7MBM2 1401 aa35.61■■■■□ 3.29
SSBP4-202ENST00000348495 WWC1Q8IX03 1113 aa35.6■■■■□ 3.29
SSBP4-202ENST00000348495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.6■■■■□ 3.293e-6■■□□□ 13.5
SSBP4-202ENST00000348495 IL2RBP14784 551 aa35.6■■■■□ 3.29
SSBP4-202ENST00000348495 THRAP3Q9Y2W1 955 aaKnown RBP35.58■■■■□ 3.29
SSBP4-202ENST00000348495 WNK3Q9BYP7 1800 aa35.58■■■■□ 3.29
SSBP4-202ENST00000348495 LMOD3Q0VAK6 560 aa35.53■■■■□ 3.28
SSBP4-202ENST00000348495 SPG7Q9UQ90 795 aa35.53■■■■□ 3.28
SSBP4-202ENST00000348495 BARGINQ6ZT62 677 aa35.52■■■■□ 3.28
SSBP4-202ENST00000348495 ATRNO75882 1429 aa35.52■■■■□ 3.28
SSBP4-202ENST00000348495 MAP3K5Q99683 1374 aa35.52■■■■□ 3.28
SSBP4-202ENST00000348495 ZNF530Q6P9A1 599 aaPredicted RBP35.52■■■■□ 3.28
SSBP4-202ENST00000348495 CCDC9Q9Y3X0 531 aaKnown RBP35.51■■■■□ 3.27
SSBP4-202ENST00000348495 HTATSF1O43719 755 aaKnown RBP35.5■■■■□ 3.27
SSBP4-202ENST00000348495 PDE3BQ13370 1112 aa35.5■■■■□ 3.27
SSBP4-202ENST00000348495 GNAT3A8MTJ3 354 aa35.49■■■■□ 3.27
SSBP4-202ENST00000348495 WDR63Q8IWG1 891 aa35.49■■■■□ 3.27
SSBP4-202ENST00000348495 CDCA7Q9BWT1 371 aaPredicted RBP35.49■■■■□ 3.27
SSBP4-202ENST00000348495 SHANK3Q9BYB0 1731 aa35.49■■■■□ 3.27
SSBP4-202ENST00000348495 AKAP4Q5JQC9 854 aa35.49■■■■□ 3.27
SSBP4-202ENST00000348495 ZCRB1Q8TBF4 217 aaKnown RBP35.49■■■■□ 3.27
SSBP4-202ENST00000348495 GOLGA2Q08379 1002 aa35.46■■■■□ 3.27
SSBP4-202ENST00000348495 TRPC5Q9UL62 973 aaPredicted RBP35.46■■■■□ 3.27
SSBP4-202ENST00000348495 GLI3P10071 1580 aa35.45■■■■□ 3.27
SSBP4-202ENST00000348495 CYP27B1O15528 508 aa35.45■■■■□ 3.27
SSBP4-202ENST00000348495 PHKG2P15735 406 aa35.44■■■■□ 3.26
SSBP4-202ENST00000348495 DCTN1Q14203 1278 aa35.44■■■■□ 3.26
SSBP4-202ENST00000348495 C1orf141Q5JVX7 400 aa35.44■■■■□ 3.26
SSBP4-202ENST00000348495 CDCA7LQ96GN5 454 aa35.44■■■■□ 3.26
SSBP4-202ENST00000348495 THUMPD2Q9BTF0 503 aaKnown RBP35.44■■■■□ 3.26
SSBP4-202ENST00000348495 GJD4Q96KN9 370 aaPredicted RBP35.43■■■■□ 3.26
SSBP4-202ENST00000348495 ADAMTS7Q9UKP4 1686 aa35.43■■■■□ 3.26
SSBP4-202ENST00000348495 PCDH11XQ9BZA7 1347 aa35.43■■■■□ 3.26
SSBP4-202ENST00000348495 PCDH11YQ9BZA8 1340 aa35.43■■■■□ 3.26
SSBP4-202ENST00000348495 MCM10Q7L590 875 aa35.43■■■■□ 3.26
SSBP4-202ENST00000348495 IL16Q14005 1332 aa35.42■■■■□ 3.26
SSBP4-202ENST00000348495 IFNL2Q8IZJ0 200 aa35.42■■■■□ 3.26
SSBP4-202ENST00000348495 RTF1Q92541 710 aaKnown RBP35.42■■■■□ 3.26
SSBP4-202ENST00000348495 SPINK5Q9NQ38 1064 aaPredicted RBP35.42■■■■□ 3.26
SSBP4-202ENST00000348495 LRRC37A3O60309 1634 aa35.42■■■■□ 3.26
SSBP4-202ENST00000348495 IL17REQ8NFR9 667 aa35.41■■■■□ 3.26
SSBP4-202ENST00000348495 TNS2Q63HR2 1409 aa35.4■■■■□ 3.26
SSBP4-202ENST00000348495 CEMIPQ8WUJ3 1361 aa35.4■■■■□ 3.26
SSBP4-202ENST00000348495 SLFN5Q08AF3 891 aa35.4■■■■□ 3.26
SSBP4-202ENST00000348495 QTRT2Q9H974 415 aaKnown RBP35.39■■■■□ 3.26
SSBP4-202ENST00000348495 CALD1Q05682 793 aaKnown RBP35.38■■■■□ 3.25
SSBP4-202ENST00000348495 FAM98CQ17RN3 349 aaKnown RBP35.38■■■■□ 3.25
SSBP4-202ENST00000348495 TRMT2AQ8IZ69 625 aaKnown RBP35.38■■■■□ 3.25
SSBP4-202ENST00000348495 THSD7AQ9UPZ6 1657 aa35.38■■■■□ 3.25
SSBP4-202ENST00000348495 E9PSI1 815 aa35.37■■■■□ 3.25
SSBP4-202ENST00000348495 ZNF772Q68DY9 489 aaPredicted RBP35.37■■■■□ 3.25
SSBP4-202ENST00000348495 MPRIPQ6WCQ1 1025 aa35.36■■■■□ 3.25
SSBP4-202ENST00000348495 LGR6Q9HBX8 967 aa35.36■■■■□ 3.25
SSBP4-202ENST00000348495 KDM6AO15550 1401 aaPredicted RBP35.35■■■■□ 3.25
SSBP4-202ENST00000348495 EXOC5O00471 708 aa35.35■■■■□ 3.25
SSBP4-202ENST00000348495 VIRMAQ69YN4 1812 aaKnown RBP35.35■■■■□ 3.25
SSBP4-202ENST00000348495 RNMTO43148 476 aaKnown RBP35.35■■■■□ 3.25
SSBP4-202ENST00000348495 NKX1-1Q15270 411 aaPredicted RBP35.35■■■■□ 3.25
SSBP4-202ENST00000348495 ONECUT3O60422 494 aaPredicted RBP35.34■■■■□ 3.25
SSBP4-202ENST00000348495 CENPBP07199 599 aaPredicted RBP35.34■■■■□ 3.25
SSBP4-202ENST00000348495 SCN11AQ9UI33 1791 aa35.33■■■■□ 3.25
SSBP4-202ENST00000348495 HSP90AB1P08238 724 aaKnown RBP35.33■■■■□ 3.25
SSBP4-202ENST00000348495 ZNF853P0CG23 659 aa35.33■■■■□ 3.25
SSBP4-202ENST00000348495 DDB1Q16531 1140 aa35.33■■■■□ 3.25
SSBP4-202ENST00000348495 DDX54Q8TDD1 881 aaKnown RBP35.33■■■■□ 3.25
SSBP4-202ENST00000348495 DUSP27Q5VZP5 1158 aa35.32■■■■□ 3.25
SSBP4-202ENST00000348495 DCAF5Q96JK2 942 aa35.32■■■■□ 3.25
SSBP4-202ENST00000348495 IFT57Q9NWB7 429 aa35.32■■■■□ 3.24
SSBP4-202ENST00000348495 CFAP44Q96MT7 982 aa35.29■■■■□ 3.24
SSBP4-202ENST00000348495 MYH16Q9H6N6 1097 aa35.28■■■■□ 3.24
SSBP4-202ENST00000348495 GNAI1P63096 354 aa35.27■■■■□ 3.24
SSBP4-202ENST00000348495 MRC1P22897 1456 aa35.27■■■■□ 3.24
SSBP4-202ENST00000348495 RGS17Q9UGC6 210 aaPredicted RBP35.26■■■■□ 3.24
SSBP4-202ENST00000348495 CHL1O00533 1208 aa35.25■■■■□ 3.23
SSBP4-202ENST00000348495 FANCIQ9NVI1 1328 aa35.25■■■■□ 3.23
SSBP4-202ENST00000348495 SIPA1L3O60292 1781 aaPredicted RBP35.25■■■■□ 3.23
SSBP4-202ENST00000348495 TAF7Q15545 349 aaPredicted RBP35.23■■■■□ 3.23
SSBP4-202ENST00000348495 MARCH10Q8NA82 808 aaPredicted RBP35.23■■■■□ 3.23
SSBP4-202ENST00000348495 TSR2Q969E8 191 aaKnown RBP35.23■■■■□ 3.23
SSBP4-202ENST00000348495 LAS1LQ9Y4W2 734 aaKnown RBP35.23■■■■□ 3.23
SSBP4-202ENST00000348495 TOGARAM1Q9Y4F4 1720 aa35.22■■■■□ 3.23
SSBP4-202ENST00000348495 RBM6P78332 1123 aaKnown RBP35.22■■■■□ 3.23
SSBP4-202ENST00000348495 MBIPQ9NS73 344 aa35.22■■■■□ 3.23
SSBP4-202ENST00000348495 TEFQ10587 303 aa35.21■■■■□ 3.23
SSBP4-202ENST00000348495 BABAM1Q9NWV8 329 aa35.21■■■■□ 3.23
SSBP4-202ENST00000348495 SLC52A2Q9HAB3 445 aa35.2■■■■□ 3.23
SSBP4-202ENST00000348495 A0A0G2JS52 829 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms