RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 CAVIN1Q6NZI2 390 aaKnown RBP17.97■□□□□ 0.47
SMTN-202ENST00000347557 RRP9O43818 475 aaKnown RBP17.96■□□□□ 0.47
SMTN-202ENST00000347557 NEO1Q92859 1461 aa17.96■□□□□ 0.47
SMTN-202ENST00000347557 ERBB4Q15303 1308 aa17.96■□□□□ 0.47
SMTN-202ENST00000347557 NCOA3Q9Y6Q9 1424 aa17.96■□□□□ 0.47
SMTN-202ENST00000347557 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
SMTN-202ENST00000347557 RABEP1Q15276 862 aa17.96■□□□□ 0.47
SMTN-202ENST00000347557 CEP85Q6P2H3 762 aa17.96■□□□□ 0.47
SMTN-202ENST00000347557 ZGPATQ8N5A5 531 aaKnown RBP17.96■□□□□ 0.47
SMTN-202ENST00000347557 CLCN1P35523 988 aa17.95■□□□□ 0.46
SMTN-202ENST00000347557 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
SMTN-202ENST00000347557 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
SMTN-202ENST00000347557 ANKRD44Q8N8A2 993 aa17.95■□□□□ 0.46
SMTN-202ENST00000347557 METP08581 1390 aa17.95■□□□□ 0.46
SMTN-202ENST00000347557 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
SMTN-202ENST00000347557 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
SMTN-202ENST00000347557 NASPP49321 788 aaPredicted RBP17.94■□□□□ 0.46
SMTN-202ENST00000347557 EXOC6BQ9Y2D4 811 aa17.94■□□□□ 0.46
SMTN-202ENST00000347557 TMEM131LA2VDJ0 1609 aa17.94■□□□□ 0.46
SMTN-202ENST00000347557 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.94■□□□□ 0.46
SMTN-202ENST00000347557 MSH6P52701 1360 aa17.94■□□□□ 0.46
SMTN-202ENST00000347557 G2E3Q7L622 706 aa17.94■□□□□ 0.46
SMTN-202ENST00000347557 MAP2P11137 1827 aaKnown RBP17.93■□□□□ 0.46
SMTN-202ENST00000347557 EDC4Q6P2E9 1401 aaKnown RBP17.93■□□□□ 0.46
SMTN-202ENST00000347557 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
SMTN-202ENST00000347557 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
SMTN-202ENST00000347557 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
SMTN-202ENST00000347557 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
SMTN-202ENST00000347557 ST18O60284 1047 aa17.92■□□□□ 0.46
SMTN-202ENST00000347557 RPAP2Q8IXW5 612 aaPredicted RBP17.92■□□□□ 0.46
SMTN-202ENST00000347557 RILPL2Q969X0 211 aa17.91■□□□□ 0.46
SMTN-202ENST00000347557 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
SMTN-202ENST00000347557 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
SMTN-202ENST00000347557 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
SMTN-202ENST00000347557 PTMSP20962 102 aa17.89■□□□□ 0.46
SMTN-202ENST00000347557 NEK4P51957 841 aa17.89■□□□□ 0.46
SMTN-202ENST00000347557 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.46
SMTN-202ENST00000347557 ATP7BP35670 1465 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 CHL1O00533 1208 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 AK9Q5TCS8 1911 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 CPS1P31327 1500 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 NUCB2P80303 420 aa17.89■□□□□ 0.45
SMTN-202ENST00000347557 ACEP12821 1306 aa17.88■□□□□ 0.45
SMTN-202ENST00000347557 HMMRO75330 724 aa17.88■□□□□ 0.45
SMTN-202ENST00000347557 REC8O95072 547 aa17.88■□□□□ 0.45
SMTN-202ENST00000347557 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
SMTN-202ENST00000347557 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
SMTN-202ENST00000347557 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
SMTN-202ENST00000347557 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 RTL1A6NKG5 1358 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 ANKRD26Q9UPS8 1709 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 TTC21BQ7Z4L5 1316 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 ERC2O15083 957 aa17.87■□□□□ 0.45
SMTN-202ENST00000347557 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
SMTN-202ENST00000347557 CPSF1Q10570 1443 aaKnown RBP17.87■□□□□ 0.45
SMTN-202ENST00000347557 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
SMTN-202ENST00000347557 A2ML1A8K2U0 1454 aa17.86■□□□□ 0.45
SMTN-202ENST00000347557 CDK12Q9NYV4 1490 aaPredicted RBP17.86■□□□□ 0.45
SMTN-202ENST00000347557 AMPHP49418 695 aa17.85■□□□□ 0.45
SMTN-202ENST00000347557 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
SMTN-202ENST00000347557 STK31Q9BXU1 1019 aa17.85■□□□□ 0.45
SMTN-202ENST00000347557 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
SMTN-202ENST00000347557 PDE1AP54750 535 aa17.85■□□□□ 0.45
SMTN-202ENST00000347557 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
SMTN-202ENST00000347557 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
SMTN-202ENST00000347557 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
SMTN-202ENST00000347557 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.45
SMTN-202ENST00000347557 C14orf37Q86TY3 774 aa17.83■□□□□ 0.45
SMTN-202ENST00000347557 RNF214Q8ND24 703 aa17.83■□□□□ 0.45
SMTN-202ENST00000347557 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.45
SMTN-202ENST00000347557 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.44
SMTN-202ENST00000347557 UPF3BQ9BZI7 483 aaKnown RBP17.83■□□□□ 0.44
SMTN-202ENST00000347557 ATP10DQ9P241 1426 aa17.83■□□□□ 0.44
SMTN-202ENST00000347557 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
SMTN-202ENST00000347557 NGDNQ8NEJ9 315 aaKnown RBP17.83■□□□□ 0.44
SMTN-202ENST00000347557 IL1RAPL2Q9NP60 686 aa17.83■□□□□ 0.44
SMTN-202ENST00000347557 PTPRCP08575 1304 aa17.82■□□□□ 0.44
SMTN-202ENST00000347557 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
SMTN-202ENST00000347557 MAP3K19Q56UN5 1328 aa17.82■□□□□ 0.44
SMTN-202ENST00000347557 GNAI2P04899 355 aa17.82■□□□□ 0.44
SMTN-202ENST00000347557 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
SMTN-202ENST00000347557 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
SMTN-202ENST00000347557 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
SMTN-202ENST00000347557 SYCE3A1L190 88 aa17.81■□□□□ 0.44
SMTN-202ENST00000347557 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
SMTN-202ENST00000347557 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
SMTN-202ENST00000347557 TMX3Q96JJ7 454 aa17.8■□□□□ 0.44
SMTN-202ENST00000347557 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
SMTN-202ENST00000347557 PALD1Q9ULE6 856 aa17.8■□□□□ 0.44
SMTN-202ENST00000347557 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
SMTN-202ENST00000347557 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
SMTN-202ENST00000347557 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
SMTN-202ENST00000347557 LRRCC1Q9C099 1032 aa17.79■□□□□ 0.44
SMTN-202ENST00000347557 RICTORQ6R327 1708 aa17.79■□□□□ 0.44
SMTN-202ENST00000347557 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
SMTN-202ENST00000347557 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
SMTN-202ENST00000347557 GDPD2Q9HCC8 539 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms