RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
TUBD1-203ENST00000346141 RRS1Q15050 365 aaKnown RBP16.5■□□□□ 0.23
TUBD1-203ENST00000346141 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
TUBD1-203ENST00000346141 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
TUBD1-203ENST00000346141 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
TUBD1-203ENST00000346141 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
TUBD1-203ENST00000346141 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
TUBD1-203ENST00000346141 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
TUBD1-203ENST00000346141 NHSQ6T4R5 1651 aa16.47■□□□□ 0.23
TUBD1-203ENST00000346141 KCNQ2O43526 872 aa16.47■□□□□ 0.23
TUBD1-203ENST00000346141 FLT4P35916 1363 aa16.46■□□□□ 0.23
TUBD1-203ENST00000346141 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
TUBD1-203ENST00000346141 PROM2Q8N271 834 aa16.46■□□□□ 0.23
TUBD1-203ENST00000346141 INSRP06213 1382 aa16.46■□□□□ 0.22
TUBD1-203ENST00000346141 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
TUBD1-203ENST00000346141 TXNRD1Q16881 649 aa16.45■□□□□ 0.22
TUBD1-203ENST00000346141 ACSBG1Q96GR2 724 aa16.45■□□□□ 0.22
TUBD1-203ENST00000346141 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
TUBD1-203ENST00000346141 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
TUBD1-203ENST00000346141 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
TUBD1-203ENST00000346141 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
TUBD1-203ENST00000346141 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
TUBD1-203ENST00000346141 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
TUBD1-203ENST00000346141 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
TUBD1-203ENST00000346141 MEGF6O75095 1541 aa16.42■□□□□ 0.22
TUBD1-203ENST00000346141 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
TUBD1-203ENST00000346141 RGPD2P0DJD1 1756 aa16.41■□□□□ 0.22
TUBD1-203ENST00000346141 SPON1Q9HCB6 807 aa16.41■□□□□ 0.22
TUBD1-203ENST00000346141 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
TUBD1-203ENST00000346141 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
TUBD1-203ENST00000346141 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
TUBD1-203ENST00000346141 BTAF1O14981 1849 aa16.4■□□□□ 0.22
TUBD1-203ENST00000346141 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
TUBD1-203ENST00000346141 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
TUBD1-203ENST00000346141 PPM1GO15355 546 aaPredicted RBP16.38■□□□□ 0.21
TUBD1-203ENST00000346141 SLC15A2Q16348 729 aa16.38■□□□□ 0.21
TUBD1-203ENST00000346141 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
TUBD1-203ENST00000346141 ANKRD26Q9UPS8 1709 aa16.38■□□□□ 0.21
TUBD1-203ENST00000346141 SYTL4Q96C24 671 aaPredicted RBP16.36■□□□□ 0.21
TUBD1-203ENST00000346141 PANK3Q9H999 370 aa16.36■□□□□ 0.21
TUBD1-203ENST00000346141 SHANK3Q9BYB0 1731 aa16.36■□□□□ 0.21
TUBD1-203ENST00000346141 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
TUBD1-203ENST00000346141 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
TUBD1-203ENST00000346141 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
TUBD1-203ENST00000346141 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 NSD2O96028 1365 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 PPP1R1BQ9UD71 204 aaPredicted RBP16.35■□□□□ 0.21
TUBD1-203ENST00000346141 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
TUBD1-203ENST00000346141 PAPPAQ13219 1627 aa16.35■□□□□ 0.21
TUBD1-203ENST00000346141 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
TUBD1-203ENST00000346141 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
TUBD1-203ENST00000346141 TNNT2P45379 298 aaPredicted RBP16.32■□□□□ 0.2
TUBD1-203ENST00000346141 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
TUBD1-203ENST00000346141 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
TUBD1-203ENST00000346141 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
TUBD1-203ENST00000346141 EYA1Q99502 592 aa16.3■□□□□ 0.2
TUBD1-203ENST00000346141 MTFR1LQ9H019 292 aa16.3■□□□□ 0.2
TUBD1-203ENST00000346141 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
TUBD1-203ENST00000346141 CYP27B1O15528 508 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.27e-6■■□□□ 12.8
TUBD1-203ENST00000346141 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
TUBD1-203ENST00000346141 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
TUBD1-203ENST00000346141 KIF7Q2M1P5 1343 aa16.28■□□□□ 0.2
TUBD1-203ENST00000346141 PTGER2P43116 358 aa16.28■□□□□ 0.2
TUBD1-203ENST00000346141 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
TUBD1-203ENST00000346141 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
TUBD1-203ENST00000346141 LY75O60449 1722 aa16.27■□□□□ 0.2
TUBD1-203ENST00000346141 HMGB2P26583 209 aaKnown RBP16.27■□□□□ 0.19
TUBD1-203ENST00000346141 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
TUBD1-203ENST00000346141 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
TUBD1-203ENST00000346141 KCNQ4P56696 695 aa16.24■□□□□ 0.19
TUBD1-203ENST00000346141 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
TUBD1-203ENST00000346141 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
TUBD1-203ENST00000346141 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
TUBD1-203ENST00000346141 QSER1Q2KHR3 1735 aa16.23■□□□□ 0.19
TUBD1-203ENST00000346141 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
TUBD1-203ENST00000346141 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
TUBD1-203ENST00000346141 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
TUBD1-203ENST00000346141 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
TUBD1-203ENST00000346141 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
TUBD1-203ENST00000346141 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
TUBD1-203ENST00000346141 TOGARAM1Q9Y4F4 1720 aa16.22■□□□□ 0.19
TUBD1-203ENST00000346141 PHKG2P15735 406 aa16.22■□□□□ 0.19
TUBD1-203ENST00000346141 PIGBQ92521 554 aa16.21■□□□□ 0.19
TUBD1-203ENST00000346141 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
TUBD1-203ENST00000346141 ARXQ96QS3 562 aa16.2■□□□□ 0.18
TUBD1-203ENST00000346141 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
TUBD1-203ENST00000346141 ITGB4P16144 1822 aa16.19■□□□□ 0.18
TUBD1-203ENST00000346141 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
TUBD1-203ENST00000346141 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
TUBD1-203ENST00000346141 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
TUBD1-203ENST00000346141 POLD1P28340 1107 aa16.18■□□□□ 0.18
TUBD1-203ENST00000346141 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms