RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
CUL3-202ENST00000344951 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
CUL3-202ENST00000344951 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
CUL3-202ENST00000344951 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
CUL3-202ENST00000344951 BCCIPQ9P287 314 aaKnown RBP eCLIP17.68■□□□□ 0.42
CUL3-202ENST00000344951 GOLGA6L7A0A1B0GV03 622 aa17.67■□□□□ 0.42
CUL3-202ENST00000344951 CCP110O43303 1012 aa17.67■□□□□ 0.42
CUL3-202ENST00000344951 PRKCSHP14314 528 aaPredicted RBP17.67■□□□□ 0.42
CUL3-202ENST00000344951 CHD1LQ86WJ1 897 aa17.67■□□□□ 0.42
CUL3-202ENST00000344951 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
CUL3-202ENST00000344951 FAM69CQ0P6D2 419 aa17.67■□□□□ 0.42
CUL3-202ENST00000344951 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
CUL3-202ENST00000344951 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
CUL3-202ENST00000344951 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
CUL3-202ENST00000344951 DYDC1Q8WWB3 177 aa17.66■□□□□ 0.42
CUL3-202ENST00000344951 PDCP20941 246 aa17.66■□□□□ 0.42
CUL3-202ENST00000344951 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
CUL3-202ENST00000344951 GNAI2P04899 355 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
CUL3-202ENST00000344951 DDX11Q96FC9 970 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 MAP2K1Q02750 393 aaPredicted RBP17.65■□□□□ 0.42
CUL3-202ENST00000344951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.65■□□□□ 0.42
CUL3-202ENST00000344951 CAMK4Q16566 473 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
CUL3-202ENST00000344951 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.42
CUL3-202ENST00000344951 CEP63Q96MT8 703 aa17.64■□□□□ 0.42
CUL3-202ENST00000344951 LUC7LQ9NQ29 371 aaKnown RBP17.64■□□□□ 0.41
CUL3-202ENST00000344951 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
CUL3-202ENST00000344951 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 PLEKHO1Q53GL0 409 aaPredicted RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 UBAC1Q9BSL1 405 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 IDH1O75874 414 aaKnown RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 BMP2KQ9NSY1 1161 aaPredicted RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 CWC27Q6UX04 472 aaKnown RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 ATF7IPQ6VMQ6 1270 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 AACSQ86V21 672 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 TAF4BQ92750 862 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 NOL7Q9UMY1 257 aaKnown RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 SYCE3A1L190 88 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 PIP4K2AP48426 406 aaPredicted RBP17.63■□□□□ 0.41
CUL3-202ENST00000344951 JAKMIP3Q5VZ66 844 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
CUL3-202ENST00000344951 CEP57L1Q8IYX8 460 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 KLHL10Q6JEL2 608 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 FILIP1Q7Z7B0 1213 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 DRC1Q96MC2 740 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
CUL3-202ENST00000344951 HIP1O00291 1037 aa17.61■□□□□ 0.41
CUL3-202ENST00000344951 CFTRP13569 1480 aa17.61■□□□□ 0.41
CUL3-202ENST00000344951 CRACR2BQ8N4Y2 399 aaPredicted RBP17.61■□□□□ 0.41
CUL3-202ENST00000344951 MINDY4BA8MYZ0 360 aa17.61■□□□□ 0.41
CUL3-202ENST00000344951 CCDC91Q7Z6B0 441 aa17.61■□□□□ 0.41
CUL3-202ENST00000344951 DACH1Q9UI36 760 aa17.61■□□□□ 0.41
CUL3-202ENST00000344951 LARP1BQ659C4 914 aaKnown RBP17.6■□□□□ 0.41
CUL3-202ENST00000344951 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
CUL3-202ENST00000344951 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
CUL3-202ENST00000344951 TRIM21P19474 475 aaKnown RBP17.6■□□□□ 0.41
CUL3-202ENST00000344951 ZSCAN30Q86W11 494 aa17.6■□□□□ 0.41
CUL3-202ENST00000344951 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
CUL3-202ENST00000344951 WDR63Q8IWG1 891 aa17.6■□□□□ 0.41
CUL3-202ENST00000344951 STAC3Q96MF2 364 aa17.6■□□□□ 0.41
CUL3-202ENST00000344951 KRT85P78386 507 aa17.6■□□□□ 0.41
CUL3-202ENST00000344951 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
CUL3-202ENST00000344951 SMC1AQ14683 1233 aaKnown RBP17.59■□□□□ 0.41
CUL3-202ENST00000344951 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
CUL3-202ENST00000344951 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 C20orf194Q5TEA3 1177 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 GIMAP7Q8NHV1 300 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
CUL3-202ENST00000344951 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.58■□□□□ 0.41
CUL3-202ENST00000344951 TERF1P54274 439 aa17.58■□□□□ 0.4
CUL3-202ENST00000344951 TXNDC2Q86VQ3 553 aa17.58■□□□□ 0.4
CUL3-202ENST00000344951 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
CUL3-202ENST00000344951 ZNF354CQ86Y25 554 aa17.58■□□□□ 0.4
CUL3-202ENST00000344951 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
CUL3-202ENST00000344951 SRRTQ9BXP5 876 aaKnown RBP17.58■□□□□ 0.4
CUL3-202ENST00000344951 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
CUL3-202ENST00000344951 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
CUL3-202ENST00000344951 WWC3Q9ULE0 1092 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 GUCY1B3Q02153 619 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 CCDC96Q2M329 555 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 MMRN2Q9H8L6 949 aa17.57■□□□□ 0.4
CUL3-202ENST00000344951 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms