RNA–Protein interactions for RNA: ENST00000344846.6

SYNGR4-201, Transcript of synaptogyrin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR4, Length 1,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR4-201ENST00000344846 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
SYNGR4-201ENST00000344846 CD2APQ9Y5K6 639 aa15.96■□□□□ 0.15
SYNGR4-201ENST00000344846 MSL1Q68DK7 614 aa15.94■□□□□ 0.14
SYNGR4-201ENST00000344846 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
SYNGR4-201ENST00000344846 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
SYNGR4-201ENST00000344846 C5P01031 1676 aa15.94■□□□□ 0.14
SYNGR4-201ENST00000344846 KIF3CO14782 793 aa15.93■□□□□ 0.14
SYNGR4-201ENST00000344846 MSH5O43196 834 aa15.93■□□□□ 0.14
SYNGR4-201ENST00000344846 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
SYNGR4-201ENST00000344846 SYTL4Q96C24 671 aaPredicted RBP15.93■□□□□ 0.14
SYNGR4-201ENST00000344846 CICQ96RK0 1608 aaPredicted RBP15.93■□□□□ 0.14
SYNGR4-201ENST00000344846 CD163L1Q9NR16 1453 aa15.92■□□□□ 0.14
SYNGR4-201ENST00000344846 SBNO2Q9Y2G9 1366 aa15.92■□□□□ 0.14
SYNGR4-201ENST00000344846 NME9Q86XW9 330 aa15.92■□□□□ 0.14
SYNGR4-201ENST00000344846 APLP1P51693 650 aa15.91■□□□□ 0.14
SYNGR4-201ENST00000344846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
SYNGR4-201ENST00000344846 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
SYNGR4-201ENST00000344846 MEGF6O75095 1541 aa15.89■□□□□ 0.13
SYNGR4-201ENST00000344846 USP47Q96K76 1375 aa15.88■□□□□ 0.13
SYNGR4-201ENST00000344846 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
SYNGR4-201ENST00000344846 DNAJC5GQ8N7S2 189 aa15.88■□□□□ 0.13
SYNGR4-201ENST00000344846 IGSF1Q8N6C5 1336 aa15.88■□□□□ 0.13
SYNGR4-201ENST00000344846 EDC4Q6P2E9 1401 aaKnown RBP15.87■□□□□ 0.13
SYNGR4-201ENST00000344846 IP6K1Q92551 441 aa15.87■□□□□ 0.13
SYNGR4-201ENST00000344846 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
SYNGR4-201ENST00000344846 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
SYNGR4-201ENST00000344846 WDR90Q96KV7 1748 aa15.85■□□□□ 0.13
SYNGR4-201ENST00000344846 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
SYNGR4-201ENST00000344846 ZCRB1Q8TBF4 217 aaKnown RBP15.84■□□□□ 0.13
SYNGR4-201ENST00000344846 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
SYNGR4-201ENST00000344846 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
SYNGR4-201ENST00000344846 TOMM70O94826 608 aa15.83■□□□□ 0.12
SYNGR4-201ENST00000344846 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
SYNGR4-201ENST00000344846 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
SYNGR4-201ENST00000344846 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
SYNGR4-201ENST00000344846 PALLDQ8WX93 1383 aa15.82■□□□□ 0.12
SYNGR4-201ENST00000344846 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 NSD3Q9BZ95 1437 aa15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 COL13A1Q5TAT6 717 aaPredicted RBP15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
SYNGR4-201ENST00000344846 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
SYNGR4-201ENST00000344846 HOXC9P31274 260 aa15.79■□□□□ 0.12
SYNGR4-201ENST00000344846 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
SYNGR4-201ENST00000344846 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
SYNGR4-201ENST00000344846 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
SYNGR4-201ENST00000344846 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
SYNGR4-201ENST00000344846 RTL1A6NKG5 1358 aa15.77■□□□□ 0.12
SYNGR4-201ENST00000344846 AK7Q96M32 723 aa15.77■□□□□ 0.12
SYNGR4-201ENST00000344846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 KLRG1Q96E93 195 aa15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 SLC12A5Q9H2X9 1139 aa15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
SYNGR4-201ENST00000344846 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
SYNGR4-201ENST00000344846 ITGB4P16144 1822 aa15.75■□□□□ 0.11
SYNGR4-201ENST00000344846 CAPN15O75808 1086 aa15.75■□□□□ 0.11
SYNGR4-201ENST00000344846 PHF14O94880 888 aa15.75■□□□□ 0.11
SYNGR4-201ENST00000344846 RBM46Q8TBY0 533 aaKnown RBP15.75■□□□□ 0.11
SYNGR4-201ENST00000344846 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 SSFA2P28290 1259 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 PRELPP51888 382 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
SYNGR4-201ENST00000344846 N4BP2Q86UW6 1770 aaPredicted RBP15.73■□□□□ 0.11
SYNGR4-201ENST00000344846 AMPHP49418 695 aa15.73■□□□□ 0.11
SYNGR4-201ENST00000344846 SMIM5Q71RC9 77 aa15.73■□□□□ 0.11
SYNGR4-201ENST00000344846 TNS4Q8IZW8 715 aa15.73■□□□□ 0.11
SYNGR4-201ENST00000344846 SMARCC1Q92922 1105 aaPredicted RBP15.73■□□□□ 0.11
SYNGR4-201ENST00000344846 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
SYNGR4-201ENST00000344846 HTRA3P83110 453 aa15.72■□□□□ 0.11
SYNGR4-201ENST00000344846 MPRIPQ6WCQ1 1025 aa15.72■□□□□ 0.11
SYNGR4-201ENST00000344846 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
SYNGR4-201ENST00000344846 RAPGEF4Q8WZA2 1011 aa15.72■□□□□ 0.11
SYNGR4-201ENST00000344846 BRCA1P38398 1863 aaKnown RBP15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 PKD1L3Q7Z443 1732 aa15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 COG3Q96JB2 828 aa15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 PLEKHG2Q9H7P9 1386 aa15.71■□□□□ 0.11
SYNGR4-201ENST00000344846 TATP17735 454 aaPredicted RBP15.7■□□□□ 0.1
SYNGR4-201ENST00000344846 FBLN1P23142 703 aa15.7■□□□□ 0.1
SYNGR4-201ENST00000344846 FSTL1Q12841 308 aa15.7■□□□□ 0.1
SYNGR4-201ENST00000344846 CYP27B1O15528 508 aa15.69■□□□□ 0.1
SYNGR4-201ENST00000344846 MMP10P09238 476 aa15.69■□□□□ 0.1
SYNGR4-201ENST00000344846 LINC00116Q8NCU8 138 aa15.69■□□□□ 0.1
SYNGR4-201ENST00000344846 SIN3AQ96ST3 1273 aa15.69■□□□□ 0.1
SYNGR4-201ENST00000344846 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
SYNGR4-201ENST00000344846 TGFB2P61812 414 aa15.68■□□□□ 0.1
SYNGR4-201ENST00000344846 PUS7Q96PZ0 661 aaKnown RBP15.68■□□□□ 0.1
SYNGR4-201ENST00000344846 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
SYNGR4-201ENST00000344846 TNRC6CQ9HCJ0 1690 aaKnown RBP15.67■□□□□ 0.1
SYNGR4-201ENST00000344846 LOC102724428A0A0B4J2F2 783 aa15.67■□□□□ 0.1
SYNGR4-201ENST00000344846 GNPATO15228 680 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms