RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 PTF1AQ7RTS3 328 aa9.72□□□□□ -0.85
GDNF-202ENST00000344622 ITGB4P16144 1822 aa9.72□□□□□ -0.85
GDNF-202ENST00000344622 PCNTO95613 3336 aa9.72□□□□□ -0.85
GDNF-202ENST00000344622 WDR17Q8IZU2 1322 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 CYP27B1O15528 508 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 DUSP27Q5VZP5 1158 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 IL17REQ8NFR9 667 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 C8orf37Q96NL8 207 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.85
GDNF-202ENST00000344622 ABCC6O95255 1503 aa9.71□□□□□ -0.85
GDNF-202ENST00000344622 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.85
GDNF-202ENST00000344622 DISP2A7MBM2 1401 aa9.71□□□□□ -0.86
GDNF-202ENST00000344622 JCADQ9P266 1359 aa9.71□□□□□ -0.86
GDNF-202ENST00000344622 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
GDNF-202ENST00000344622 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.7□□□□□ -0.86
GDNF-202ENST00000344622 PARP4Q9UKK3 1724 aaKnown RBP9.7□□□□□ -0.86
GDNF-202ENST00000344622 CRB1P82279 1406 aa9.7□□□□□ -0.86
GDNF-202ENST00000344622 RIPK4P57078 832 aa9.7□□□□□ -0.86
GDNF-202ENST00000344622 KAT6BQ8WYB5 2073 aa9.7□□□□□ -0.86
GDNF-202ENST00000344622 CFAP53Q96M91 514 aa9.69□□□□□ -0.86
GDNF-202ENST00000344622 NLRP2Q9NX02 1062 aa9.69□□□□□ -0.86
GDNF-202ENST00000344622 KCNQ3O43525 872 aa9.69□□□□□ -0.86
GDNF-202ENST00000344622 C5P01031 1676 aa9.69□□□□□ -0.86
GDNF-202ENST00000344622 KDM3BQ7LBC6 1761 aa9.69□□□□□ -0.86
GDNF-202ENST00000344622 TSPYL6Q8N831 410 aa9.68□□□□□ -0.86
GDNF-202ENST00000344622 OVOS2A0A0G2JMS6 1433 aa9.68□□□□□ -0.86
GDNF-202ENST00000344622 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
GDNF-202ENST00000344622 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
GDNF-202ENST00000344622 FNBP4Q8N3X1 1017 aaPredicted RBP9.68□□□□□ -0.86
GDNF-202ENST00000344622 TNNQ9UQP3 1299 aa9.68□□□□□ -0.86
GDNF-202ENST00000344622 THSD7AQ9UPZ6 1657 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 SLFN5Q08AF3 891 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 DOT1LQ8TEK3 1739 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 NFE2L2Q16236 605 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 SPATA31A1Q5TZJ5 1347 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 SBF2Q86WG5 1849 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 TOM1L2Q6ZVM7 507 aa9.67□□□□□ -0.86
GDNF-202ENST00000344622 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
GDNF-202ENST00000344622 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
GDNF-202ENST00000344622 CEMIPQ8WUJ3 1361 aa9.66□□□□□ -0.86
GDNF-202ENST00000344622 ZNF853P0CG23 659 aa9.66□□□□□ -0.86
GDNF-202ENST00000344622 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
GDNF-202ENST00000344622 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.86
GDNF-202ENST00000344622 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.86
GDNF-202ENST00000344622 FANCIQ9NVI1 1328 aa9.65□□□□□ -0.86
GDNF-202ENST00000344622 CARD10Q9BWT7 1032 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 PAPPAQ13219 1627 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 AFF2P51816 1311 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 PLIN1O60240 522 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 MYT1Q01538 1121 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 FKBP8Q14318 412 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 FAM98CQ17RN3 349 aaKnown RBP9.64□□□□□ -0.87
GDNF-202ENST00000344622 CCDC27Q2M243 656 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 C8orf58Q8NAV2 365 aa9.64□□□□□ -0.87
GDNF-202ENST00000344622 BCAR3O75815 825 aa9.63□□□□□ -0.87
GDNF-202ENST00000344622 PHKG2P15735 406 aa9.63□□□□□ -0.87
GDNF-202ENST00000344622 NGLY1Q96IV0 654 aa9.63□□□□□ -0.87
GDNF-202ENST00000344622 ELL2O00472 640 aaPredicted RBP9.63□□□□□ -0.87
GDNF-202ENST00000344622 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
GDNF-202ENST00000344622 UNC5CLQ8IV45 518 aa9.63□□□□□ -0.87
GDNF-202ENST00000344622 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 MARCH10Q8NA82 808 aaPredicted RBP9.62□□□□□ -0.87
GDNF-202ENST00000344622 BCL2L13Q9BXK5 485 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 KCNQ2O43526 872 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 USP21Q9UK80 565 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 MAP3K5Q99683 1374 aa9.62□□□□□ -0.87
GDNF-202ENST00000344622 ATRNO75882 1429 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 EVA1CP58658 441 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 GOLGA2Q08379 1002 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 NFATC2IPQ8NCF5 419 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 LAS1LQ9Y4W2 734 aaKnown RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 MRC1P22897 1456 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 MAPK8IP3Q9UPT6 1336 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 EXOSC9Q06265 439 aaKnown RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 ZNF530Q6P9A1 599 aaPredicted RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 POTEAQ6S8J7 498 aa9.61□□□□□ -0.87
GDNF-202ENST00000344622 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
GDNF-202ENST00000344622 FBXO41Q8TF61 875 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 SLC4A9Q96Q91 983 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 GNAT3A8MTJ3 354 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 IL2RBP14784 551 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 CHL1O00533 1208 aa9.6□□□□□ -0.87
GDNF-202ENST00000344622 RNMTO43148 476 aaKnown RBP9.59□□□□□ -0.87
GDNF-202ENST00000344622 KCNQ4P56696 695 aa9.59□□□□□ -0.87
GDNF-202ENST00000344622 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
GDNF-202ENST00000344622 VPS72Q15906 364 aa9.59□□□□□ -0.87
GDNF-202ENST00000344622 TNS2Q63HR2 1409 aa9.58□□□□□ -0.88
GDNF-202ENST00000344622 BTAF1O14981 1849 aa9.58□□□□□ -0.88
GDNF-202ENST00000344622 AKAP4Q5JQC9 854 aa9.58□□□□□ -0.88
GDNF-202ENST00000344622 CFAP44Q96MT7 982 aa9.58□□□□□ -0.88
GDNF-202ENST00000344622 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
GDNF-202ENST00000344622 WDR63Q8IWG1 891 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms