RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
HERPUD1-202ENST00000344114 LY75O60449 1722 aa18.33■□□□□ 0.53
HERPUD1-202ENST00000344114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.53
HERPUD1-202ENST00000344114 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.53
HERPUD1-202ENST00000344114 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.53
HERPUD1-202ENST00000344114 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
HERPUD1-202ENST00000344114 NME9Q86XW9 330 aa18.32■□□□□ 0.52
HERPUD1-202ENST00000344114 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
HERPUD1-202ENST00000344114 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
HERPUD1-202ENST00000344114 SLC27A3Q5K4L6 730 aa18.3■□□□□ 0.52
HERPUD1-202ENST00000344114 EDC4Q6P2E9 1401 aaKnown RBP18.3■□□□□ 0.52
HERPUD1-202ENST00000344114 PNPLA7Q6ZV29 1317 aa18.29■□□□□ 0.52
HERPUD1-202ENST00000344114 GPR162Q16538 588 aa18.29■□□□□ 0.52
HERPUD1-202ENST00000344114 POLD1P28340 1107 aa18.26■□□□□ 0.51
HERPUD1-202ENST00000344114 HDGFL2Q7Z4V5 671 aaPredicted RBP18.26■□□□□ 0.51
HERPUD1-202ENST00000344114 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
HERPUD1-202ENST00000344114 A0A1W2PP64 1363 aa18.25■□□□□ 0.51
HERPUD1-202ENST00000344114 NSD2O96028 1365 aa18.25■□□□□ 0.51
HERPUD1-202ENST00000344114 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
HERPUD1-202ENST00000344114 IP6K1Q92551 441 aa18.25■□□□□ 0.51
HERPUD1-202ENST00000344114 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
HERPUD1-202ENST00000344114 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
HERPUD1-202ENST00000344114 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-202ENST00000344114 RALBP1Q15311 655 aa18.23■□□□□ 0.51
HERPUD1-202ENST00000344114 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
HERPUD1-202ENST00000344114 PER1O15534 1290 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-202ENST00000344114 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
HERPUD1-202ENST00000344114 NLGN2Q8NFZ4 835 aa18.22■□□□□ 0.51
HERPUD1-202ENST00000344114 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
HERPUD1-202ENST00000344114 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
HERPUD1-202ENST00000344114 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-202ENST00000344114 KCNQ4P56696 695 aa18.21■□□□□ 0.51
HERPUD1-202ENST00000344114 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-202ENST00000344114 PANK3Q9H999 370 aa18.21■□□□□ 0.51
HERPUD1-202ENST00000344114 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
HERPUD1-202ENST00000344114 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-202ENST00000344114 GOLGB1Q14789 3259 aaKnown RBP18.19■□□□□ 0.5
HERPUD1-202ENST00000344114 C5P01031 1676 aa18.19■□□□□ 0.5
HERPUD1-202ENST00000344114 MEGF6O75095 1541 aa18.19■□□□□ 0.5
HERPUD1-202ENST00000344114 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
HERPUD1-202ENST00000344114 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 KIF20BQ96Q89 1820 aa18.18■□□□□ 0.5
HERPUD1-202ENST00000344114 HOXC9P31274 260 aa18.17■□□□□ 0.5
HERPUD1-202ENST00000344114 MAP3K19Q56UN5 1328 aa18.17■□□□□ 0.5
HERPUD1-202ENST00000344114 YBX3P16989 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
HERPUD1-202ENST00000344114 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-202ENST00000344114 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
HERPUD1-202ENST00000344114 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
HERPUD1-202ENST00000344114 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-202ENST00000344114 RTL1A6NKG5 1358 aa18.14■□□□□ 0.49
HERPUD1-202ENST00000344114 COG3Q96JB2 828 aa18.14■□□□□ 0.49
HERPUD1-202ENST00000344114 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
HERPUD1-202ENST00000344114 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
HERPUD1-202ENST00000344114 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
HERPUD1-202ENST00000344114 FBLN1P23142 703 aa18.12■□□□□ 0.49
HERPUD1-202ENST00000344114 AMPHP49418 695 aa18.12■□□□□ 0.49
HERPUD1-202ENST00000344114 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
HERPUD1-202ENST00000344114 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 MSH5O43196 834 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 ITGB4P16144 1822 aa18.1■□□□□ 0.49
HERPUD1-202ENST00000344114 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-202ENST00000344114 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
HERPUD1-202ENST00000344114 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
HERPUD1-202ENST00000344114 ADCY9O60503 1353 aa18.08■□□□□ 0.49
HERPUD1-202ENST00000344114 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.49
HERPUD1-202ENST00000344114 MSL1Q68DK7 614 aa18.08■□□□□ 0.49
HERPUD1-202ENST00000344114 UBR3Q6ZT12 1888 aa18.08■□□□□ 0.48
HERPUD1-202ENST00000344114 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-202ENST00000344114 FLAD1Q8NFF5 587 aa18.07■□□□□ 0.48
HERPUD1-202ENST00000344114 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 CEP350Q5VT06 3117 aa18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
HERPUD1-202ENST00000344114 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-202ENST00000344114 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
HERPUD1-202ENST00000344114 RAPGEF4Q8WZA2 1011 aa18.05■□□□□ 0.48
HERPUD1-202ENST00000344114 PCDH11XQ9BZA7 1347 aa18.05■□□□□ 0.48
HERPUD1-202ENST00000344114 PCDH11YQ9BZA8 1340 aa18.05■□□□□ 0.48
HERPUD1-202ENST00000344114 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
HERPUD1-202ENST00000344114 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
HERPUD1-202ENST00000344114 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-202ENST00000344114 HNRNPUQ00839 825 aaKnown RBP eCLIP18.04■□□□□ 0.48
HERPUD1-202ENST00000344114 INSRP06213 1382 aa18.03■□□□□ 0.48
HERPUD1-202ENST00000344114 FYB1O15117 783 aa18.03■□□□□ 0.48
HERPUD1-202ENST00000344114 GPBP1L1Q9HC44 474 aaPredicted RBP18.03■□□□□ 0.48
HERPUD1-202ENST00000344114 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.47
HERPUD1-202ENST00000344114 KIF24Q5T7B8 1368 aa18.01■□□□□ 0.47
HERPUD1-202ENST00000344114 CARD14Q9BXL6 1004 aa18.01■□□□□ 0.47
HERPUD1-202ENST00000344114 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
HERPUD1-202ENST00000344114 FLT4P35916 1363 aa18■□□□□ 0.47
HERPUD1-202ENST00000344114 CICQ96RK0 1608 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms