RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
HMGCR-202ENST00000343975 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
HMGCR-202ENST00000343975 SPATA31A1Q5TZJ5 1347 aa10.58□□□□□ -0.72
HMGCR-202ENST00000343975 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
HMGCR-202ENST00000343975 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
HMGCR-202ENST00000343975 TMPOP42166 694 aaKnown RBP10.57□□□□□ -0.72
HMGCR-202ENST00000343975 SEPT12Q8IYM1 358 aa10.57□□□□□ -0.72
HMGCR-202ENST00000343975 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
HMGCR-202ENST00000343975 TMOD3Q9NYL9 352 aa10.57□□□□□ -0.72
HMGCR-202ENST00000343975 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
HMGCR-202ENST00000343975 GNAI1P63096 354 aa10.56□□□□□ -0.72
HMGCR-202ENST00000343975 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
HMGCR-202ENST00000343975 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
HMGCR-202ENST00000343975 TRPM3Q9HCF6 1732 aaPredicted RBP10.56□□□□□ -0.72
HMGCR-202ENST00000343975 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
HMGCR-202ENST00000343975 CANXP27824 592 aaKnown RBP10.56□□□□□ -0.72
HMGCR-202ENST00000343975 COL5A2P05997 1499 aaPredicted RBP10.56□□□□□ -0.72
HMGCR-202ENST00000343975 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
HMGCR-202ENST00000343975 DCAF5Q96JK2 942 aa10.56□□□□□ -0.72
HMGCR-202ENST00000343975 KRT27Q7Z3Y8 459 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 NFAT5O94916 1531 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 ABCC6O95255 1503 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 MPRIPQ6WCQ1 1025 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
HMGCR-202ENST00000343975 COL14A1Q05707 1796 aaKnown RBP10.54□□□□□ -0.72
HMGCR-202ENST00000343975 NEFLP07196 543 aa10.54□□□□□ -0.72
HMGCR-202ENST00000343975 MTHFSDQ2M296 383 aaKnown RBP10.54□□□□□ -0.72
HMGCR-202ENST00000343975 MAP3K5Q99683 1374 aa10.54□□□□□ -0.72
HMGCR-202ENST00000343975 SHPRHQ149N8 1683 aa10.54□□□□□ -0.72
HMGCR-202ENST00000343975 FAM196AQ6ZSG2 479 aa10.54□□□□□ -0.72
HMGCR-202ENST00000343975 MAP2P11137 1827 aaKnown RBP10.53□□□□□ -0.72
HMGCR-202ENST00000343975 E9PSI1 815 aa10.53□□□□□ -0.72
HMGCR-202ENST00000343975 SMARCC1Q92922 1105 aaPredicted RBP10.53□□□□□ -0.72
HMGCR-202ENST00000343975 ARXQ96QS3 562 aa10.53□□□□□ -0.72
HMGCR-202ENST00000343975 KAT6BQ8WYB5 2073 aa10.53□□□□□ -0.72
HMGCR-202ENST00000343975 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
HMGCR-202ENST00000343975 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
HMGCR-202ENST00000343975 BTBD11A6QL63 1104 aa10.52□□□□□ -0.73
HMGCR-202ENST00000343975 PHKG2P15735 406 aa10.52□□□□□ -0.73
HMGCR-202ENST00000343975 WDR63Q8IWG1 891 aa10.52□□□□□ -0.73
HMGCR-202ENST00000343975 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
HMGCR-202ENST00000343975 RBM42Q9BTD8 480 aaKnown RBP10.52□□□□□ -0.73
HMGCR-202ENST00000343975 SLIT2O94813 1529 aa10.51□□□□□ -0.73
HMGCR-202ENST00000343975 OVOS2A0A0G2JMS6 1433 aa10.51□□□□□ -0.73
HMGCR-202ENST00000343975 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
HMGCR-202ENST00000343975 MCM10Q7L590 875 aa10.51□□□□□ -0.73
HMGCR-202ENST00000343975 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-202ENST00000343975 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
HMGCR-202ENST00000343975 ACSBG1Q96GR2 724 aa10.51□□□□□ -0.73
HMGCR-202ENST00000343975 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
HMGCR-202ENST00000343975 KDRP35968 1356 aa10.5□□□□□ -0.73
HMGCR-202ENST00000343975 ZBED9Q6R2W3 1325 aa10.5□□□□□ -0.73
HMGCR-202ENST00000343975 ERVV-2B6SEH9 535 aa10.5□□□□□ -0.73
HMGCR-202ENST00000343975 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
HMGCR-202ENST00000343975 LRP6O75581 1613 aa10.5□□□□□ -0.73
HMGCR-202ENST00000343975 PLEKHG2Q9H7P9 1386 aa10.49□□□□□ -0.73
HMGCR-202ENST00000343975 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
HMGCR-202ENST00000343975 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
HMGCR-202ENST00000343975 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
HMGCR-202ENST00000343975 LTN1O94822 1766 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 BAG6P46379 1132 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 IFT57Q9NWB7 429 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
HMGCR-202ENST00000343975 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
HMGCR-202ENST00000343975 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
HMGCR-202ENST00000343975 TEX13AQ9BXU3 409 aaPredicted RBP10.47□□□□□ -0.73
HMGCR-202ENST00000343975 BCL9LQ86UU0 1499 aa10.47□□□□□ -0.73
HMGCR-202ENST00000343975 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
HMGCR-202ENST00000343975 NCAPD2Q15021 1401 aa10.47□□□□□ -0.73
HMGCR-202ENST00000343975 IL16Q14005 1332 aa10.47□□□□□ -0.73
HMGCR-202ENST00000343975 STARD3NLO95772 234 aa10.47□□□□□ -0.73
HMGCR-202ENST00000343975 NFATC2IPQ8NCF5 419 aa10.47□□□□□ -0.73
HMGCR-202ENST00000343975 ATRNO75882 1429 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 CYP27B1O15528 508 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 SLC52A2Q9HAB3 445 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 BABAM1Q9NWV8 329 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.73
HMGCR-202ENST00000343975 EIF2S2P20042 333 aaKnown RBP10.46□□□□□ -0.74
HMGCR-202ENST00000343975 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
HMGCR-202ENST00000343975 POTEAQ6S8J7 498 aa10.45□□□□□ -0.74
HMGCR-202ENST00000343975 TNS2Q63HR2 1409 aa10.45□□□□□ -0.74
HMGCR-202ENST00000343975 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
HMGCR-202ENST00000343975 USP54Q70EL1 1684 aa10.45□□□□□ -0.74
HMGCR-202ENST00000343975 APBA3O96018 575 aa10.45□□□□□ -0.74
HMGCR-202ENST00000343975 NPHP1O15259 732 aa10.45□□□□□ -0.74
HMGCR-202ENST00000343975 MSH5O43196 834 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 MS4A1P11836 297 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 MEGF6O75095 1541 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 TRIM37O94972 964 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 MARCH10Q8NA82 808 aaPredicted RBP10.44□□□□□ -0.74
HMGCR-202ENST00000343975 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
HMGCR-202ENST00000343975 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
HMGCR-202ENST00000343975 CCDC30Q5VVM6 783 aa10.44□□□□□ -0.74
HMGCR-202ENST00000343975 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms