RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 R3HDM1Q15032 1099 aaKnown RBP27.66■■■□□ 2.02
DUSP28-201ENST00000343217 TNS2Q63HR2 1409 aa27.65■■■□□ 2.02
DUSP28-201ENST00000343217 ANKRD24Q8TF21 1146 aa27.65■■■□□ 2.02
DUSP28-201ENST00000343217 COL3A1P02461 1466 aaPredicted RBP27.65■■■□□ 2.02
DUSP28-201ENST00000343217 EXOC5O00471 708 aa27.65■■■□□ 2.02
DUSP28-201ENST00000343217 IP6K1Q92551 441 aa27.65■■■□□ 2.02
DUSP28-201ENST00000343217 NLRP2Q9NX02 1062 aa27.65■■■□□ 2.02
DUSP28-201ENST00000343217 NUDCQ9Y266 331 aa27.64■■■□□ 2.01
DUSP28-201ENST00000343217 FAM208AQ9UK61 1670 aaKnown RBP27.64■■■□□ 2.01
DUSP28-201ENST00000343217 BCL11BQ9C0K0 894 aaPredicted RBP27.63■■■□□ 2.01
DUSP28-201ENST00000343217 PLSCR1O15162 318 aa27.61■■■□□ 2.01
DUSP28-201ENST00000343217 PTF1AQ7RTS3 328 aa27.6■■■□□ 2.01
DUSP28-201ENST00000343217 MAP3K19Q56UN5 1328 aa27.6■■■□□ 2.01
DUSP28-201ENST00000343217 DIAPH1O60610 1272 aaKnown RBP27.59■■■□□ 2.01
DUSP28-201ENST00000343217 IL2RBP14784 551 aa27.59■■■□□ 2.01
DUSP28-201ENST00000343217 FBLN1P23142 703 aa27.58■■■□□ 2.01
DUSP28-201ENST00000343217 EMILIN1Q9Y6C2 1016 aa27.58■■■□□ 2.01
DUSP28-201ENST00000343217 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
DUSP28-201ENST00000343217 HOXC9P31274 260 aa27.56■■■□□ 2
DUSP28-201ENST00000343217 RRS1Q15050 365 aaKnown RBP27.56■■■□□ 2
DUSP28-201ENST00000343217 NBPF14Q5TI25 921 aa27.56■■■□□ 2
DUSP28-201ENST00000343217 NHSQ6T4R5 1651 aa27.55■■■□□ 2
DUSP28-201ENST00000343217 RGPD2P0DJD1 1756 aa27.55■■■□□ 2
DUSP28-201ENST00000343217 RTL1A6NKG5 1358 aa27.53■■■□□ 2
DUSP28-201ENST00000343217 AMPHP49418 695 aa27.53■■■□□ 2
DUSP28-201ENST00000343217 NGEFQ8N5V2 710 aa27.53■■■□□ 2
DUSP28-201ENST00000343217 KIF24Q5T7B8 1368 aa27.53■■■□□ 2
DUSP28-201ENST00000343217 U2AF1L5P0DN76 240 aaPredicted RBP27.52■■■□□ 2
DUSP28-201ENST00000343217 U2AF1Q01081 240 aaKnown RBP eCLIP27.52■■■□□ 2
DUSP28-201ENST00000343217 LTV1Q96GA3 475 aaPredicted RBP27.52■■■□□ 2
DUSP28-201ENST00000343217 PROM2Q8N271 834 aa27.5■■□□□ 1.99
DUSP28-201ENST00000343217 RUNDC1Q96C34 613 aa27.5■■□□□ 1.99
DUSP28-201ENST00000343217 PNNQ9H307 717 aaKnown RBP27.5■■□□□ 1.99
DUSP28-201ENST00000343217 U2SURPO15042 1029 aaKnown RBP27.49■■□□□ 1.99
DUSP28-201ENST00000343217 KCNQ2O43526 872 aa27.48■■□□□ 1.99
DUSP28-201ENST00000343217 KAT6BQ8WYB5 2073 aa27.48■■□□□ 1.99
DUSP28-201ENST00000343217 FLT4P35916 1363 aa27.48■■□□□ 1.99
DUSP28-201ENST00000343217 CCDC146Q8IYE0 955 aa27.48■■□□□ 1.99
DUSP28-201ENST00000343217 IL13P35225 146 aa27.46■■□□□ 1.99
DUSP28-201ENST00000343217 BTAF1O14981 1849 aa27.45■■□□□ 1.99
DUSP28-201ENST00000343217 ANO8Q9HCE9 1232 aaPredicted RBP27.45■■□□□ 1.99
DUSP28-201ENST00000343217 SHANK3Q9BYB0 1731 aa27.45■■□□□ 1.98
DUSP28-201ENST00000343217 ACSBG1Q96GR2 724 aa27.44■■□□□ 1.98
DUSP28-201ENST00000343217 APAF1O14727 1248 aa27.43■■□□□ 1.98
DUSP28-201ENST00000343217 FCHSD2O94868 740 aa27.43■■□□□ 1.98
DUSP28-201ENST00000343217 TXNRD1Q16881 649 aa27.43■■□□□ 1.98
DUSP28-201ENST00000343217 NCBP3Q53F19 620 aaKnown RBP27.43■■□□□ 1.98
DUSP28-201ENST00000343217 CASZ1Q86V15 1759 aa27.41■■□□□ 1.98
DUSP28-201ENST00000343217 MEGF6O75095 1541 aa27.41■■□□□ 1.98
DUSP28-201ENST00000343217 SALL2Q9Y467 1007 aaPredicted RBP27.41■■□□□ 1.98
DUSP28-201ENST00000343217 NBPF6Q5VWK0 638 aa27.4■■□□□ 1.98
DUSP28-201ENST00000343217 NBPF4Q96M43 638 aa27.4■■□□□ 1.98
DUSP28-201ENST00000343217 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.98
DUSP28-201ENST00000343217 EIF4A2Q14240 407 aaKnown RBP27.39■■□□□ 1.97
DUSP28-201ENST00000343217 HSP90AB2PQ58FF8 381 aa27.39■■□□□ 1.97
DUSP28-201ENST00000343217 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.97
DUSP28-201ENST00000343217 PLEKHF1Q96S99 279 aa27.38■■□□□ 1.97
DUSP28-201ENST00000343217 MAPK8IP3Q9UPT6 1336 aa27.37■■□□□ 1.97
DUSP28-201ENST00000343217 NEFMP07197 916 aa27.37■■□□□ 1.97
DUSP28-201ENST00000343217 ZCRB1Q8TBF4 217 aaKnown RBP27.36■■□□□ 1.97
DUSP28-201ENST00000343217 ZNF521Q96K83 1311 aa27.36■■□□□ 1.97
DUSP28-201ENST00000343217 RSPH6AQ9H0K4 717 aa27.35■■□□□ 1.97
DUSP28-201ENST00000343217 DOT1LQ8TEK3 1739 aa27.35■■□□□ 1.97
DUSP28-201ENST00000343217 PAPPAQ13219 1627 aa27.34■■□□□ 1.97
DUSP28-201ENST00000343217 USHBP1Q8N6Y0 703 aa27.34■■□□□ 1.97
DUSP28-201ENST00000343217 SPON1Q9HCB6 807 aa27.34■■□□□ 1.97
DUSP28-201ENST00000343217 CCDC27Q2M243 656 aa27.33■■□□□ 1.97
DUSP28-201ENST00000343217 SLC15A2Q16348 729 aa27.32■■□□□ 1.96
DUSP28-201ENST00000343217 STK32BQ9NY57 414 aa27.31■■□□□ 1.96
DUSP28-201ENST00000343217 PRKAR2BP31323 418 aa27.31■■□□□ 1.96
DUSP28-201ENST00000343217 HMOX1P09601 288 aa27.3■■□□□ 1.96
DUSP28-201ENST00000343217 GOLGA2Q08379 1002 aa27.3■■□□□ 1.96
DUSP28-201ENST00000343217 RAPGEF4Q8WZA2 1011 aa27.3■■□□□ 1.96
DUSP28-201ENST00000343217 PDGFDQ9GZP0 370 aaPredicted RBP27.3■■□□□ 1.96
DUSP28-201ENST00000343217 NCAPD2Q15021 1401 aa27.28■■□□□ 1.96
DUSP28-201ENST00000343217 TATP17735 454 aaPredicted RBP27.27■■□□□ 1.96
DUSP28-201ENST00000343217 WWC1Q8IX03 1113 aa27.27■■□□□ 1.96
DUSP28-201ENST00000343217 TMPOP42166 694 aaKnown RBP27.26■■□□□ 1.96
DUSP28-201ENST00000343217 PRIM1P49642 420 aaKnown RBP27.26■■□□□ 1.96
DUSP28-201ENST00000343217 LRRC4BQ9NT99 713 aa27.26■■□□□ 1.96
DUSP28-201ENST00000343217 LY75O60449 1722 aa27.26■■□□□ 1.95
DUSP28-201ENST00000343217 IGSF1Q8N6C5 1336 aa27.26■■□□□ 1.95
DUSP28-201ENST00000343217 KDRP35968 1356 aa27.25■■□□□ 1.95
DUSP28-201ENST00000343217 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
DUSP28-201ENST00000343217 SULT6B1Q6IMI4 303 aa27.25■■□□□ 1.95
DUSP28-201ENST00000343217 PKD1L3Q7Z443 1732 aa27.25■■□□□ 1.95
DUSP28-201ENST00000343217 RRP7AQ9Y3A4 280 aaKnown RBP27.24■■□□□ 1.95
DUSP28-201ENST00000343217 SLC27A3Q5K4L6 730 aa27.23■■□□□ 1.95
DUSP28-201ENST00000343217 WDR63Q8IWG1 891 aa27.23■■□□□ 1.95
DUSP28-201ENST00000343217 SYTL4Q96C24 671 aaPredicted RBP27.23■■□□□ 1.95
DUSP28-201ENST00000343217 CDCA7LQ96GN5 454 aa27.23■■□□□ 1.95
DUSP28-201ENST00000343217 PCDH11XQ9BZA7 1347 aa27.22■■□□□ 1.95
DUSP28-201ENST00000343217 PCDH11YQ9BZA8 1340 aa27.22■■□□□ 1.95
DUSP28-201ENST00000343217 E9PSI1 815 aa27.22■■□□□ 1.95
DUSP28-201ENST00000343217 EYA1Q99502 592 aa27.22■■□□□ 1.95
DUSP28-201ENST00000343217 ZBTB7AO95365 584 aa27.21■■□□□ 1.95
DUSP28-201ENST00000343217 PPP1R1BQ9UD71 204 aaPredicted RBP27.21■■□□□ 1.95
DUSP28-201ENST00000343217 QSER1Q2KHR3 1735 aa27.21■■□□□ 1.95
DUSP28-201ENST00000343217 SLFN5Q08AF3 891 aa27.2■■□□□ 1.94
DUSP28-201ENST00000343217 NFE2L2Q16236 605 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms