RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 LETM1O95202 739 aaPredicted RBP8.6□□□□□ -1.03
VCAN-202ENST00000342785 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
VCAN-202ENST00000342785 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 MEIS3Q99687 375 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 TRIM5Q9C035 493 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 ANKLE2Q86XL3 938 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 ZRANB1Q9UGI0 708 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 MYL6BP14649 208 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 ACEP12821 1306 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
VCAN-202ENST00000342785 PTPRCP08575 1304 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 KRT85P78386 507 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 NFXL1Q6ZNB6 911 aa8.6□□□□□ -1.03
VCAN-202ENST00000342785 STK3Q13188 491 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 PPP6R1Q9UPN7 881 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 SYCE3A1L190 88 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
VCAN-202ENST00000342785 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 TTC22Q5TAA0 569 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 SAMD9Q5K651 1589 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 ASXL2Q76L83 1435 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 ANKRD44Q8N8A2 993 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 ZSCAN30Q86W11 494 aa8.59□□□□□ -1.03
VCAN-202ENST00000342785 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
VCAN-202ENST00000342785 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
VCAN-202ENST00000342785 KINO60870 393 aaKnown RBP8.58□□□□□ -1.04
VCAN-202ENST00000342785 CEBPZQ03701 1054 aaKnown RBP8.58□□□□□ -1.04
VCAN-202ENST00000342785 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 ANKRD1Q15327 319 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 TSHZ3Q63HK5 1081 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 INSRP06213 1382 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 ITSN2Q9NZM3 1697 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 BAG4O95429 457 aaKnown RBP8.58□□□□□ -1.04
VCAN-202ENST00000342785 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
VCAN-202ENST00000342785 SDSP20132 328 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 PES1O00541 588 aaKnown RBP8.58□□□□□ -1.04
VCAN-202ENST00000342785 CCDC192P0DO97 292 aa8.58□□□□□ -1.04
VCAN-202ENST00000342785 FOXO3O43524 673 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
VCAN-202ENST00000342785 KRT24Q2M2I5 525 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
VCAN-202ENST00000342785 HOMER1Q86YM7 354 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 TPM3P06753 285 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 SAFBQ15424 915 aaKnown RBP eCLIP8.57□□□□□ -1.04
VCAN-202ENST00000342785 TPD52L1Q16890 204 aaPredicted RBP8.57□□□□□ -1.04
VCAN-202ENST00000342785 MPRIPQ6WCQ1 1025 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 A0A1W2PP64 1363 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 RBM33Q96EV2 1170 aaKnown RBP8.57□□□□□ -1.04
VCAN-202ENST00000342785 TPM2P07951 284 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 CABP4P57796 275 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 CCAR2Q8N163 923 aaKnown RBP8.57□□□□□ -1.04
VCAN-202ENST00000342785 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
VCAN-202ENST00000342785 XRCC6P12956 609 aaKnown RBP eCLIP8.56□□□□□ -1.04
VCAN-202ENST00000342785 EIF4A2Q14240 407 aaKnown RBP8.56□□□□□ -1.04
VCAN-202ENST00000342785 C16orf71Q8IYS4 520 aaPredicted RBP8.56□□□□□ -1.04
VCAN-202ENST00000342785 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 HMGN5P82970 282 aaKnown RBP8.56□□□□□ -1.04
VCAN-202ENST00000342785 CCDC83Q8IWF9 413 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 DBF4Q9UBU7 674 aaPredicted RBP8.56□□□□□ -1.04
VCAN-202ENST00000342785 PI4KAP2A4QPH2 592 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 KLHL40Q2TBA0 621 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 PPP1R42Q7Z4L9 355 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 PI4KAP1Q8N8J0 262 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 ANXA1P04083 346 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 PDE1AP54750 535 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 STK38Q15208 465 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 BOLA2Q9H3K6 86 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 ABCA5Q8WWZ7 1642 aa8.56□□□□□ -1.04
VCAN-202ENST00000342785 ATP2B1P20020 1258 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 SNX21Q969T3 373 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 NAT10Q9H0A0 1025 aaKnown RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 TNMDQ9H2S6 317 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 MBD5Q9P267 1494 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 ZNF518AQ6AHZ1 1483 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 ERICH2A1L162 156 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 GDPD2Q9HCC8 539 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 DHX16O60231 1041 aaKnown RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 LARP1Q6PKG0 1096 aaKnown RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 CCDC8Q9H0W5 538 aaPredicted RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 TBC1D2BQ9UPU7 963 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 BLMP54132 1417 aaPredicted RBP8.55□□□□□ -1.04
VCAN-202ENST00000342785 WDR7Q9Y4E6 1490 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 KRT32Q14532 448 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 CCDC158Q5M9N0 1113 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 MAP7D2Q96T17 732 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 ECHDC1Q9NTX5 307 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 LIMCH1Q9UPQ0 1083 aa8.55□□□□□ -1.04
VCAN-202ENST00000342785 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms