RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 ERC2O15083 957 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 C9orf78Q9NZ63 289 aaPredicted RBP15.31■□□□□ 0.04
LMX1A-202ENST00000342310 METP08581 1390 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 MSH6P52701 1360 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 TTC21BQ7Z4L5 1316 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 FGD1P98174 961 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 FLIIQ13045 1269 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 TCEANC2Q96MN5 208 aa15.3■□□□□ 0.04
LMX1A-202ENST00000342310 VPS37CA5D8V6 355 aaPredicted RBP15.29■□□□□ 0.04
LMX1A-202ENST00000342310 FIBPO43427 364 aa15.29■□□□□ 0.04
LMX1A-202ENST00000342310 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
LMX1A-202ENST00000342310 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
LMX1A-202ENST00000342310 PSME1Q06323 249 aa15.29■□□□□ 0.04
LMX1A-202ENST00000342310 EYA1Q99502 592 aa15.29■□□□□ 0.04
LMX1A-202ENST00000342310 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
LMX1A-202ENST00000342310 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
LMX1A-202ENST00000342310 RPAP2Q8IXW5 612 aaPredicted RBP15.28■□□□□ 0.04
LMX1A-202ENST00000342310 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
LMX1A-202ENST00000342310 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
LMX1A-202ENST00000342310 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
LMX1A-202ENST00000342310 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.04
LMX1A-202ENST00000342310 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.04
LMX1A-202ENST00000342310 RBM25P49756 843 aaKnown RBP15.27■□□□□ 0.04
LMX1A-202ENST00000342310 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.04
LMX1A-202ENST00000342310 MX1P20591 662 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 PDE1AP54750 535 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.03
LMX1A-202ENST00000342310 FERMT3Q86UX7 667 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 FBXW7Q969H0 707 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 PKNOX2Q96KN3 472 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.03
LMX1A-202ENST00000342310 MYOM2P54296 1465 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 MYL6BP14649 208 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 NUCB2P80303 420 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 RAB3GAP1Q15042 981 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 USP26Q9BXU7 913 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 KIF1BO60333 1816 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 LTKP29376 864 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
LMX1A-202ENST00000342310 TET3O43151 1660 aa15.25■□□□□ 0.03
LMX1A-202ENST00000342310 STK3Q13188 491 aa15.25■□□□□ 0.03
LMX1A-202ENST00000342310 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
LMX1A-202ENST00000342310 CEP152O94986 1710 aa15.25■□□□□ 0.03
LMX1A-202ENST00000342310 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
LMX1A-202ENST00000342310 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
LMX1A-202ENST00000342310 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
LMX1A-202ENST00000342310 TULP4Q9NRJ4 1543 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 KIF2CQ99661 725 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 PA2G4Q9UQ80 394 aaKnown RBP15.24■□□□□ 0.03
LMX1A-202ENST00000342310 KDM4AO75164 1064 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 TMX3Q96JJ7 454 aa15.24■□□□□ 0.03
LMX1A-202ENST00000342310 IQGAP1P46940 1657 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
LMX1A-202ENST00000342310 PPP1R42Q7Z4L9 355 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 ZNF830Q96NB3 372 aaPredicted RBP15.23■□□□□ 0.03
LMX1A-202ENST00000342310 ZMYND15Q9H091 742 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 GNAT3A8MTJ3 354 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 KCNQ3O43525 872 aa15.23■□□□□ 0.03
LMX1A-202ENST00000342310 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
LMX1A-202ENST00000342310 GNAI3P08754 354 aa15.22■□□□□ 0.03
LMX1A-202ENST00000342310 CCDC8Q9H0W5 538 aaPredicted RBP15.22■□□□□ 0.03
LMX1A-202ENST00000342310 GOLGA6L4A6NEF3 574 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 CHL1O00533 1208 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 IFIT2P09913 472 aaKnown RBP15.21■□□□□ 0.03
LMX1A-202ENST00000342310 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
LMX1A-202ENST00000342310 CEBPZQ03701 1054 aaKnown RBP15.21■□□□□ 0.03
LMX1A-202ENST00000342310 LGR6Q9HBX8 967 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 ZSCAN23Q3MJ62 389 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 SNX21Q969T3 373 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 CHPF2Q9P2E5 772 aa15.21■□□□□ 0.03
LMX1A-202ENST00000342310 ABCC4O15439 1325 aa15.21■□□□□ 0.02
LMX1A-202ENST00000342310 ERBB4Q15303 1308 aa15.21■□□□□ 0.02
LMX1A-202ENST00000342310 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.02
LMX1A-202ENST00000342310 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
LMX1A-202ENST00000342310 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
LMX1A-202ENST00000342310 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
LMX1A-202ENST00000342310 NBPF7P0C2Y1 421 aaPredicted RBP15.2■□□□□ 0.02
LMX1A-202ENST00000342310 KLHDC4Q8TBB5 520 aa15.2■□□□□ 0.02
LMX1A-202ENST00000342310 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
LMX1A-202ENST00000342310 NLRP2Q9NX02 1062 aa15.2■□□□□ 0.02
LMX1A-202ENST00000342310 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
LMX1A-202ENST00000342310 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
LMX1A-202ENST00000342310 CCDC83Q8IWF9 413 aa15.19■□□□□ 0.02
LMX1A-202ENST00000342310 CWF19L2Q2TBE0 894 aaKnown RBP15.19■□□□□ 0.02
LMX1A-202ENST00000342310 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
LMX1A-202ENST00000342310 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
LMX1A-202ENST00000342310 NECAB1Q8N987 351 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms