RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 GNAI1P63096 354 aa18.71■□□□□ 0.59
PBX3-201ENST00000342287 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
PBX3-201ENST00000342287 NFKBIBQ15653 356 aa18.71■□□□□ 0.59
PBX3-201ENST00000342287 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
PBX3-201ENST00000342287 PHRF1Q9P1Y6 1649 aaKnown RBP18.71■□□□□ 0.59
PBX3-201ENST00000342287 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
PBX3-201ENST00000342287 PXDNQ92626 1479 aa18.7■□□□□ 0.58
PBX3-201ENST00000342287 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
PBX3-201ENST00000342287 TNS3Q68CZ2 1445 aa18.7■□□□□ 0.58
PBX3-201ENST00000342287 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
PBX3-201ENST00000342287 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
PBX3-201ENST00000342287 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
PBX3-201ENST00000342287 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
PBX3-201ENST00000342287 MTHFSDQ2M296 383 aaKnown RBP18.68■□□□□ 0.58
PBX3-201ENST00000342287 GAS2L2Q8NHY3 880 aa18.68■□□□□ 0.58
PBX3-201ENST00000342287 CFAP44Q96MT7 982 aa18.68■□□□□ 0.58
PBX3-201ENST00000342287 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
PBX3-201ENST00000342287 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
PBX3-201ENST00000342287 MED1Q15648 1581 aaPredicted RBP18.67■□□□□ 0.58
PBX3-201ENST00000342287 DLG5Q8TDM6 1919 aa18.67■□□□□ 0.58
PBX3-201ENST00000342287 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
PBX3-201ENST00000342287 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
PBX3-201ENST00000342287 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
PBX3-201ENST00000342287 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
PBX3-201ENST00000342287 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
PBX3-201ENST00000342287 SOS2Q07890 1332 aaPredicted RBP18.65■□□□□ 0.58
PBX3-201ENST00000342287 PDE3AQ14432 1141 aa18.64■□□□□ 0.58
PBX3-201ENST00000342287 USHBP1Q8N6Y0 703 aa18.64■□□□□ 0.58
PBX3-201ENST00000342287 ANKRD24Q8TF21 1146 aa18.64■□□□□ 0.57
PBX3-201ENST00000342287 MBIPQ9NS73 344 aa18.64■□□□□ 0.57
PBX3-201ENST00000342287 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
PBX3-201ENST00000342287 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
PBX3-201ENST00000342287 MCM10Q7L590 875 aa18.64■□□□□ 0.57
PBX3-201ENST00000342287 CABLES1Q8TDN4 633 aa18.63■□□□□ 0.57
PBX3-201ENST00000342287 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
PBX3-201ENST00000342287 LRRC59Q96AG4 307 aaKnown RBP18.62■□□□□ 0.57
PBX3-201ENST00000342287 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
PBX3-201ENST00000342287 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
PBX3-201ENST00000342287 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
PBX3-201ENST00000342287 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
PBX3-201ENST00000342287 CHL1O00533 1208 aa18.6■□□□□ 0.57
PBX3-201ENST00000342287 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
PBX3-201ENST00000342287 ERBB3P21860 1342 aa18.59■□□□□ 0.57
PBX3-201ENST00000342287 CRB1P82279 1406 aa18.58■□□□□ 0.57
PBX3-201ENST00000342287 VAMP4O75379 141 aa18.58■□□□□ 0.56
PBX3-201ENST00000342287 CPDO75976 1380 aa18.58■□□□□ 0.56
PBX3-201ENST00000342287 NCAPD2Q15021 1401 aa18.58■□□□□ 0.56
PBX3-201ENST00000342287 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
PBX3-201ENST00000342287 MAP3K5Q99683 1374 aa18.57■□□□□ 0.56
PBX3-201ENST00000342287 MS4A1P11836 297 aa18.56■□□□□ 0.56
PBX3-201ENST00000342287 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
PBX3-201ENST00000342287 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
PBX3-201ENST00000342287 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
PBX3-201ENST00000342287 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
PBX3-201ENST00000342287 RGS3P49796 1198 aa18.56■□□□□ 0.56
PBX3-201ENST00000342287 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
PBX3-201ENST00000342287 KIAA0232Q92628 1395 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 ABCC6O95255 1503 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 PDE4AP27815 886 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 SLC4A3P48751 1232 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
PBX3-201ENST00000342287 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
PBX3-201ENST00000342287 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
PBX3-201ENST00000342287 HAP1P54257 671 aaPredicted RBP18.54■□□□□ 0.56
PBX3-201ENST00000342287 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
PBX3-201ENST00000342287 KIF16BQ96L93 1317 aa18.54■□□□□ 0.56
PBX3-201ENST00000342287 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
PBX3-201ENST00000342287 RGPD2P0DJD1 1756 aa18.54■□□□□ 0.56
PBX3-201ENST00000342287 IL17REQ8NFR9 667 aa18.53■□□□□ 0.56
PBX3-201ENST00000342287 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
PBX3-201ENST00000342287 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
PBX3-201ENST00000342287 LTBP4Q8N2S1 1624 aa18.53■□□□□ 0.56
PBX3-201ENST00000342287 NLRP2Q9NX02 1062 aa18.53■□□□□ 0.56
PBX3-201ENST00000342287 NHSL1Q5SYE7 1610 aa18.53■□□□□ 0.56
PBX3-201ENST00000342287 COL18A1P39060 1754 aa18.52■□□□□ 0.56
PBX3-201ENST00000342287 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
PBX3-201ENST00000342287 ATF7IPQ6VMQ6 1270 aa18.52■□□□□ 0.56
PBX3-201ENST00000342287 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
PBX3-201ENST00000342287 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
PBX3-201ENST00000342287 PRDM4Q9UKN5 801 aa18.52■□□□□ 0.56
PBX3-201ENST00000342287 CSB-PGBD3P0DP91 1061 aa18.52■□□□□ 0.55
PBX3-201ENST00000342287 RLBP1P12271 317 aa18.52■□□□□ 0.55
PBX3-201ENST00000342287 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 FTSJ3Q8IY81 847 aaKnown RBP18.51■□□□□ 0.55
PBX3-201ENST00000342287 CLUAP1Q96AJ1 413 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
PBX3-201ENST00000342287 PRDM11Q9NQV5 511 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 BABAM1Q9NWV8 329 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 TNNQ9UQP3 1299 aa18.51■□□□□ 0.55
PBX3-201ENST00000342287 TRIM27P14373 513 aa18.5■□□□□ 0.55
PBX3-201ENST00000342287 TAF7Q15545 349 aaPredicted RBP18.5■□□□□ 0.55
PBX3-201ENST00000342287 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
PBX3-201ENST00000342287 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
PBX3-201ENST00000342287 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
PBX3-201ENST00000342287 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
PBX3-201ENST00000342287 LMO7Q8WWI1 1683 aa18.49■□□□□ 0.55
PBX3-201ENST00000342287 CEMIPQ8WUJ3 1361 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms