RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
PMS1-201ENST00000342075 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
PMS1-201ENST00000342075 NGLY1Q96IV0 654 aa18.15■□□□□ 0.5
PMS1-201ENST00000342075 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
PMS1-201ENST00000342075 CRB1P82279 1406 aa18.14■□□□□ 0.49
PMS1-201ENST00000342075 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
PMS1-201ENST00000342075 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
PMS1-201ENST00000342075 GAS2L2Q8NHY3 880 aa18.14■□□□□ 0.49
PMS1-201ENST00000342075 E9PSI1 815 aa18.14■□□□□ 0.49
PMS1-201ENST00000342075 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
PMS1-201ENST00000342075 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
PMS1-201ENST00000342075 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
PMS1-201ENST00000342075 VIRMAQ69YN4 1812 aaKnown RBP18.13■□□□□ 0.49
PMS1-201ENST00000342075 TATP17735 454 aaPredicted RBP18.13■□□□□ 0.49
PMS1-201ENST00000342075 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
PMS1-201ENST00000342075 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
PMS1-201ENST00000342075 NGEFQ8N5V2 710 aa18.12■□□□□ 0.49
PMS1-201ENST00000342075 SLIT2O94813 1529 aa18.12■□□□□ 0.49
PMS1-201ENST00000342075 EP400Q96L91 3159 aa18.12■□□□□ 0.49
PMS1-201ENST00000342075 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
PMS1-201ENST00000342075 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
PMS1-201ENST00000342075 CYP27B1O15528 508 aa18.11■□□□□ 0.49
PMS1-201ENST00000342075 RTF1Q92541 710 aaKnown RBP18.11■□□□□ 0.49
PMS1-201ENST00000342075 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
PMS1-201ENST00000342075 BCL9LQ86UU0 1499 aa18.1■□□□□ 0.49
PMS1-201ENST00000342075 KRT24Q2M2I5 525 aa18.1■□□□□ 0.49
PMS1-201ENST00000342075 MEX3CQ5U5Q3 659 aaKnown RBP18.1■□□□□ 0.49
PMS1-201ENST00000342075 MBIPQ9NS73 344 aa18.1■□□□□ 0.49
PMS1-201ENST00000342075 IL2RBP14784 551 aa18.09■□□□□ 0.49
PMS1-201ENST00000342075 OVOS2A0A0G2JMS6 1433 aa18.09■□□□□ 0.49
PMS1-201ENST00000342075 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
PMS1-201ENST00000342075 EXOSC9Q06265 439 aaKnown RBP18.09■□□□□ 0.49
PMS1-201ENST00000342075 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
PMS1-201ENST00000342075 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
PMS1-201ENST00000342075 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.49
PMS1-201ENST00000342075 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.49
PMS1-201ENST00000342075 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.49
PMS1-201ENST00000342075 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
PMS1-201ENST00000342075 C1orf141Q5JVX7 400 aa18.08■□□□□ 0.48
PMS1-201ENST00000342075 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
PMS1-201ENST00000342075 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
PMS1-201ENST00000342075 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
PMS1-201ENST00000342075 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 AKAP4Q5JQC9 854 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 LRRC37A3O60309 1634 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 PHKG2P15735 406 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
PMS1-201ENST00000342075 SPATA31A1Q5TZJ5 1347 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 PLIN1O60240 522 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 ZNF853P0CG23 659 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 UNC5CLQ8IV45 518 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 KDM6AO15550 1401 aaPredicted RBP18.06■□□□□ 0.48
PMS1-201ENST00000342075 USP21Q9UK80 565 aa18.06■□□□□ 0.48
PMS1-201ENST00000342075 CFAP44Q96MT7 982 aa18.05■□□□□ 0.48
PMS1-201ENST00000342075 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
PMS1-201ENST00000342075 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
PMS1-201ENST00000342075 AFF2P51816 1311 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 IL16Q14005 1332 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 BCAR3O75815 825 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 KAT6BQ8WYB5 2073 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
PMS1-201ENST00000342075 FNBP4Q8N3X1 1017 aaPredicted RBP18.04■□□□□ 0.48
PMS1-201ENST00000342075 WNK3Q9BYP7 1800 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
PMS1-201ENST00000342075 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
PMS1-201ENST00000342075 KCNQ3O43525 872 aa18.03■□□□□ 0.48
PMS1-201ENST00000342075 FAM98CQ17RN3 349 aaKnown RBP18.03■□□□□ 0.48
PMS1-201ENST00000342075 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
PMS1-201ENST00000342075 GNAI1P63096 354 aa18.03■□□□□ 0.48
PMS1-201ENST00000342075 CHL1O00533 1208 aa18.02■□□□□ 0.48
PMS1-201ENST00000342075 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
PMS1-201ENST00000342075 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.48
PMS1-201ENST00000342075 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
PMS1-201ENST00000342075 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
PMS1-201ENST00000342075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.475e-7■■■□□ 15.2
PMS1-201ENST00000342075 PCDH11XQ9BZA7 1347 aa18■□□□□ 0.47
PMS1-201ENST00000342075 PCDH11YQ9BZA8 1340 aa18■□□□□ 0.47
PMS1-201ENST00000342075 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
PMS1-201ENST00000342075 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
PMS1-201ENST00000342075 TEFQ10587 303 aa17.99■□□□□ 0.47
PMS1-201ENST00000342075 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
PMS1-201ENST00000342075 FKBP8Q14318 412 aa17.99■□□□□ 0.47
PMS1-201ENST00000342075 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
PMS1-201ENST00000342075 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
PMS1-201ENST00000342075 A0A0G2JS52 829 aa17.98■□□□□ 0.47
PMS1-201ENST00000342075 MYT1Q01538 1121 aa17.98■□□□□ 0.47
PMS1-201ENST00000342075 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
PMS1-201ENST00000342075 VPS72Q15906 364 aa17.98■□□□□ 0.47
PMS1-201ENST00000342075 SIPA1L3O60292 1781 aaPredicted RBP17.98■□□□□ 0.47
PMS1-201ENST00000342075 RARSP54136 660 aaKnown RBP17.97■□□□□ 0.47
PMS1-201ENST00000342075 FAM182BQ5T319 152 aa17.97■□□□□ 0.47
PMS1-201ENST00000342075 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
PMS1-201ENST00000342075 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
PMS1-201ENST00000342075 GLI3P10071 1580 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms