RNA–Protein interactions for RNA: ENST00000342020.5

CTSL-202, Transcript of cathepsin L, humanhuman

TSL 2 BASIC

Gene CTSL, Length 933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-202ENST00000342020 CCNL1Q9UK58 526 aaPredicted RBP18.16■□□□□ 0.5
CTSL-202ENST00000342020 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
CTSL-202ENST00000342020 APLP1P51693 650 aa18.15■□□□□ 0.5
CTSL-202ENST00000342020 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
CTSL-202ENST00000342020 PCNTO95613 3336 aa18.14■□□□□ 0.49
CTSL-202ENST00000342020 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
CTSL-202ENST00000342020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.49
CTSL-202ENST00000342020 NME9Q86XW9 330 aa18.12■□□□□ 0.49
CTSL-202ENST00000342020 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
CTSL-202ENST00000342020 IGSF1Q8N6C5 1336 aa18.09■□□□□ 0.49
CTSL-202ENST00000342020 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
CTSL-202ENST00000342020 COL13A1Q5TAT6 717 aaPredicted RBP18.08■□□□□ 0.48
CTSL-202ENST00000342020 USP47Q96K76 1375 aa18.07■□□□□ 0.48
CTSL-202ENST00000342020 C5P01031 1676 aa18.07■□□□□ 0.48
CTSL-202ENST00000342020 FAM208AQ9UK61 1670 aaKnown RBP18.07■□□□□ 0.48
CTSL-202ENST00000342020 IP6K1Q92551 441 aa18.07■□□□□ 0.48
CTSL-202ENST00000342020 CD163L1Q9NR16 1453 aa18.07■□□□□ 0.48
CTSL-202ENST00000342020 TOMM70O94826 608 aa18.06■□□□□ 0.48
CTSL-202ENST00000342020 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
CTSL-202ENST00000342020 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
CTSL-202ENST00000342020 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
CTSL-202ENST00000342020 CICQ96RK0 1608 aaPredicted RBP18.05■□□□□ 0.48
CTSL-202ENST00000342020 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
CTSL-202ENST00000342020 AMIGO3Q86WK7 504 aa18.04■□□□□ 0.48
CTSL-202ENST00000342020 MEGF6O75095 1541 aa18.03■□□□□ 0.48
CTSL-202ENST00000342020 CAPN15O75808 1086 aa18.03■□□□□ 0.48
CTSL-202ENST00000342020 WDR90Q96KV7 1748 aa18.02■□□□□ 0.48
CTSL-202ENST00000342020 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
CTSL-202ENST00000342020 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
CTSL-202ENST00000342020 JMYQ8N9B5 988 aa18■□□□□ 0.47
CTSL-202ENST00000342020 KLRG1Q96E93 195 aa18■□□□□ 0.47
CTSL-202ENST00000342020 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
CTSL-202ENST00000342020 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
CTSL-202ENST00000342020 HTRA3P83110 453 aa17.99■□□□□ 0.47
CTSL-202ENST00000342020 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
CTSL-202ENST00000342020 NMRK2Q9NPI5 230 aa17.99■□□□□ 0.47
CTSL-202ENST00000342020 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
CTSL-202ENST00000342020 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
CTSL-202ENST00000342020 PRELPP51888 382 aa17.98■□□□□ 0.47
CTSL-202ENST00000342020 PALLDQ8WX93 1383 aa17.98■□□□□ 0.47
CTSL-202ENST00000342020 HOXC9P31274 260 aa17.97■□□□□ 0.47
CTSL-202ENST00000342020 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
CTSL-202ENST00000342020 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
CTSL-202ENST00000342020 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
CTSL-202ENST00000342020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
CTSL-202ENST00000342020 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
CTSL-202ENST00000342020 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
CTSL-202ENST00000342020 AK7Q96M32 723 aa17.96■□□□□ 0.47
CTSL-202ENST00000342020 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
CTSL-202ENST00000342020 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
CTSL-202ENST00000342020 PHF14O94880 888 aa17.95■□□□□ 0.46
CTSL-202ENST00000342020 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
CTSL-202ENST00000342020 KIAA1551Q9HCM1 1747 aa17.94■□□□□ 0.46
CTSL-202ENST00000342020 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
CTSL-202ENST00000342020 PXDNLA1KZ92 1463 aa17.94■□□□□ 0.46
CTSL-202ENST00000342020 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
CTSL-202ENST00000342020 FBLN1P23142 703 aa17.93■□□□□ 0.46
CTSL-202ENST00000342020 NBPF6Q5VWK0 638 aa17.93■□□□□ 0.46
CTSL-202ENST00000342020 NBPF4Q96M43 638 aa17.93■□□□□ 0.46
CTSL-202ENST00000342020 NSD3Q9BZ95 1437 aa17.92■□□□□ 0.46
CTSL-202ENST00000342020 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
CTSL-202ENST00000342020 KIF13BQ9NQT8 1826 aa17.92■□□□□ 0.46
CTSL-202ENST00000342020 SSFA2P28290 1259 aa17.91■□□□□ 0.46
CTSL-202ENST00000342020 AMPHP49418 695 aa17.91■□□□□ 0.46
CTSL-202ENST00000342020 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
CTSL-202ENST00000342020 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
CTSL-202ENST00000342020 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
CTSL-202ENST00000342020 FSTL1Q12841 308 aa17.9■□□□□ 0.46
CTSL-202ENST00000342020 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
CTSL-202ENST00000342020 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
CTSL-202ENST00000342020 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
CTSL-202ENST00000342020 ITGB4P16144 1822 aa17.9■□□□□ 0.46
CTSL-202ENST00000342020 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
CTSL-202ENST00000342020 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
CTSL-202ENST00000342020 RAPGEF4Q8WZA2 1011 aa17.89■□□□□ 0.45
CTSL-202ENST00000342020 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
CTSL-202ENST00000342020 MMP10P09238 476 aa17.88■□□□□ 0.45
CTSL-202ENST00000342020 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
CTSL-202ENST00000342020 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
CTSL-202ENST00000342020 CYP27B1O15528 508 aa17.87■□□□□ 0.45
CTSL-202ENST00000342020 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
CTSL-202ENST00000342020 TGFB2P61812 414 aa17.87■□□□□ 0.45
CTSL-202ENST00000342020 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
CTSL-202ENST00000342020 COG3Q96JB2 828 aa17.87■□□□□ 0.45
CTSL-202ENST00000342020 C9orf131Q5VYM1 1079 aa17.86■□□□□ 0.45
CTSL-202ENST00000342020 PIGBQ92521 554 aa17.86■□□□□ 0.45
CTSL-202ENST00000342020 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
CTSL-202ENST00000342020 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
CTSL-202ENST00000342020 BRCA1P38398 1863 aaKnown RBP17.84■□□□□ 0.45
CTSL-202ENST00000342020 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
CTSL-202ENST00000342020 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
CTSL-202ENST00000342020 GNPATO15228 680 aa17.84■□□□□ 0.45
CTSL-202ENST00000342020 DPEP1P16444 411 aa17.84■□□□□ 0.45
CTSL-202ENST00000342020 SIK1P57059 783 aa17.84■□□□□ 0.45
CTSL-202ENST00000342020 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
CTSL-202ENST00000342020 FCHSD2O94868 740 aa17.83■□□□□ 0.44
CTSL-202ENST00000342020 ITPK1Q13572 414 aa17.83■□□□□ 0.44
CTSL-202ENST00000342020 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
CTSL-202ENST00000342020 PKD1L3Q7Z443 1732 aa17.82■□□□□ 0.44
CTSL-202ENST00000342020 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms