RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
PCDHB13-201ENST00000341948 C8orf37Q96NL8 207 aa18.09■□□□□ 0.49
PCDHB13-201ENST00000341948 RBM5P52756 815 aaKnown RBP eCLIP18.08■□□□□ 0.49
PCDHB13-201ENST00000341948 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.48
PCDHB13-201ENST00000341948 DBF4Q9UBU7 674 aaPredicted RBP18.08■□□□□ 0.48
PCDHB13-201ENST00000341948 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
PCDHB13-201ENST00000341948 TPM3P06753 285 aa18.06■□□□□ 0.48
PCDHB13-201ENST00000341948 NACAP1Q9BZK3 213 aa18.06■□□□□ 0.48
PCDHB13-201ENST00000341948 MAP4K4O95819 1239 aaPredicted RBP18.06■□□□□ 0.48
PCDHB13-201ENST00000341948 TRMT112Q9UI30 125 aaKnown RBP18.06■□□□□ 0.48
PCDHB13-201ENST00000341948 F6X3S4 739 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
PCDHB13-201ENST00000341948 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 KDM4AO75164 1064 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 NEK4P51957 841 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 ALDH1L2Q3SY69 923 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 ZSCAN25Q6NSZ9 544 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 STK11IPQ8N1F8 1099 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 RAI14Q9P0K7 980 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 SHANK2Q9UPX8 1470 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 XBP1P17861 261 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 GPTP24298 496 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 RABEP1Q15276 862 aa18.04■□□□□ 0.48
PCDHB13-201ENST00000341948 CCDC47Q96A33 483 aaKnown RBP18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 LRP2BPQ9P2M1 347 aa18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 UHRF1BP1Q6BDS2 1440 aa18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 MCM2P49736 904 aa18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 AK7Q96M32 723 aa18.03■□□□□ 0.48
PCDHB13-201ENST00000341948 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
PCDHB13-201ENST00000341948 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
PCDHB13-201ENST00000341948 ABCF2Q9UG63 623 aa18.02■□□□□ 0.48
PCDHB13-201ENST00000341948 TSR1Q2NL82 804 aaKnown RBP18.02■□□□□ 0.47
PCDHB13-201ENST00000341948 A0A087WZG4 1122 aa18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 TPM1P09493 284 aa18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 CCDC73Q6ZRK6 1079 aa18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 ZSCAN29Q8IWY8 852 aaPredicted RBP18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 HOOK1Q9UJC3 728 aaKnown RBP18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 IFIT5Q13325 482 aaKnown RBP18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 NOC3LQ8WTT2 800 aaKnown RBP18.01■□□□□ 0.47
PCDHB13-201ENST00000341948 FLIIQ13045 1269 aa18■□□□□ 0.47
PCDHB13-201ENST00000341948 ARID3AQ99856 593 aa18■□□□□ 0.47
PCDHB13-201ENST00000341948 GCP02774 474 aa18■□□□□ 0.47
PCDHB13-201ENST00000341948 DDB1Q16531 1140 aa18■□□□□ 0.47
PCDHB13-201ENST00000341948 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
PCDHB13-201ENST00000341948 ACSBG1Q96GR2 724 aa18■□□□□ 0.47
PCDHB13-201ENST00000341948 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
PCDHB13-201ENST00000341948 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 TPM2P07951 284 aa17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 IFIT1P09914 478 aaKnown RBP17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 KIF1BPQ96EK5 621 aa17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
PCDHB13-201ENST00000341948 ANKIB1Q9P2G1 1089 aa17.98■□□□□ 0.47
PCDHB13-201ENST00000341948 AKAP2Q9Y2D5 859 aa17.98■□□□□ 0.47
PCDHB13-201ENST00000341948 ATP2B1P20020 1258 aa17.98■□□□□ 0.47
PCDHB13-201ENST00000341948 SASS6Q6UVJ0 657 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 CAVIN4Q5BKX8 364 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 PUS7Q96PZ0 661 aaKnown RBP17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 TDO2P48775 406 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 ANXA1P04083 346 aa17.97■□□□□ 0.47
PCDHB13-201ENST00000341948 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
PCDHB13-201ENST00000341948 RFC4P35249 363 aa17.96■□□□□ 0.47
PCDHB13-201ENST00000341948 ANKRD20A12PQ8NF67 263 aa17.96■□□□□ 0.47
PCDHB13-201ENST00000341948 PDCP20941 246 aa17.96■□□□□ 0.46
PCDHB13-201ENST00000341948 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.46
PCDHB13-201ENST00000341948 CEP89Q96ST8 783 aa17.96■□□□□ 0.46
PCDHB13-201ENST00000341948 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.46
PCDHB13-201ENST00000341948 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.46
PCDHB13-201ENST00000341948 NEO1Q92859 1461 aa17.95■□□□□ 0.46
PCDHB13-201ENST00000341948 IL2RBP14784 551 aa17.95■□□□□ 0.46
PCDHB13-201ENST00000341948 SLC39A6Q13433 755 aa17.95■□□□□ 0.46
PCDHB13-201ENST00000341948 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms