RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ZNF710Q8N1W2 664 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 SPDYE4A6NLX3 237 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 RNF123Q5XPI4 1314 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 KIF16BQ96L93 1317 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 TNNT3P45378 269 aaPredicted RBP20.84■□□□□ 0.93
CDK11B-201ENST00000340677 NOP2P46087 812 aaKnown RBP20.84■□□□□ 0.93
CDK11B-201ENST00000340677 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 XRN1Q8IZH2 1706 aaKnown RBP20.83■□□□□ 0.93
CDK11B-201ENST00000340677 DNAJC14Q6Y2X3 702 aaPredicted RBP20.83■□□□□ 0.92
CDK11B-201ENST00000340677 DNAJC21Q5F1R6 531 aaKnown RBP20.82■□□□□ 0.92
CDK11B-201ENST00000340677 NLRP13Q86W25 1043 aa20.82■□□□□ 0.92
CDK11B-201ENST00000340677 SSR1P43307 286 aaKnown RBP20.81■□□□□ 0.92
CDK11B-201ENST00000340677 CCDC96Q2M329 555 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 ANKRD36BQ8N2N9 1353 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
CDK11B-201ENST00000340677 PTCH1Q13635 1447 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 DONSONQ9NYP3 566 aa20.79■□□□□ 0.92
CDK11B-201ENST00000340677 INSRP06213 1382 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 ZKSCAN8Q15776 578 aaPredicted RBP20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CASC1Q6TDU7 716 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CALCOCO1Q9P1Z2 691 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CT47B1P0C2W7 299 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 NSD2O96028 1365 aa20.77■□□□□ 0.91
CDK11B-201ENST00000340677 PLEKHH1Q9ULM0 1364 aa20.77■□□□□ 0.91
CDK11B-201ENST00000340677 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
CDK11B-201ENST00000340677 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 TNNT1P13805 278 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 RSPH14Q9UHP6 348 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 ATP7BP35670 1465 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 GABPB1Q06547 395 aaPredicted RBP20.75■□□□□ 0.91
CDK11B-201ENST00000340677 CARD14Q9BXL6 1004 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 BECN1Q14457 450 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
CDK11B-201ENST00000340677 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
CDK11B-201ENST00000340677 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
CDK11B-201ENST00000340677 NSD3Q9BZ95 1437 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 TDO2P48775 406 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 CCDC173Q0VFZ6 552 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.918e-9■■■■□ 22.1
CDK11B-201ENST00000340677 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ARMCX6Q7L4S7 300 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 PPP1R9BQ96SB3 815 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ICE2Q659A1 982 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 TMX1Q9H3N1 280 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CCDC189A1A4V9 331 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 JARID2Q92833 1246 aaPredicted RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CD163L1Q9NR16 1453 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
CDK11B-201ENST00000340677 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
CDK11B-201ENST00000340677 AKAP12Q02952 1782 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
CDK11B-201ENST00000340677 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 KIF20BQ96Q89 1820 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 CGNL1Q0VF96 1302 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 MYRIPQ8NFW9 859 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 KDM4AO75164 1064 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 RINLQ6ZS11 566 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 TSC1Q92574 1164 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 ITSN1Q15811 1721 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 ITFG2Q969R8 447 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 CDC42BPGQ6DT37 1551 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
CDK11B-201ENST00000340677 TRAK2O60296 914 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 MPHOSPH10O00566 681 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 CTR9Q6PD62 1173 aa20.66■□□□□ 0.9
CDK11B-201ENST00000340677 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 KIF1CO43896 1103 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 ZC3H12AQ5D1E8 599 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 MTA1Q13330 715 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 TSHZ1Q6ZSZ6 1077 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms