RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-202ENST00000340209 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
RBFOX1-202ENST00000340209 GCP02774 474 aa12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-202ENST00000340209 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
RBFOX1-202ENST00000340209 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
RBFOX1-202ENST00000340209 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
RBFOX1-202ENST00000340209 MEIS3Q99687 375 aa12.77□□□□□ -0.37
RBFOX1-202ENST00000340209 AIMP1Q12904 312 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-202ENST00000340209 KCNQ3O43525 872 aa12.76□□□□□ -0.37
RBFOX1-202ENST00000340209 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
RBFOX1-202ENST00000340209 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
RBFOX1-202ENST00000340209 ARHGAP23Q9P227 1491 aa12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 ARXQ96QS3 562 aa12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 SLIT1O75093 1534 aa12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-202ENST00000340209 CHL1O00533 1208 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 ZNF330Q9Y3S2 320 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 TSHZ3Q63HK5 1081 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
RBFOX1-202ENST00000340209 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 IP6K1Q92551 441 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 PHAXQ9H814 394 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 EXOC6BQ9Y2D4 811 aa12.73□□□□□ -0.37
RBFOX1-202ENST00000340209 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
RBFOX1-202ENST00000340209 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
RBFOX1-202ENST00000340209 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
RBFOX1-202ENST00000340209 MSH6P52701 1360 aa12.71□□□□□ -0.37
RBFOX1-202ENST00000340209 TAF7Q15545 349 aaPredicted RBP12.71□□□□□ -0.37
RBFOX1-202ENST00000340209 FLIIQ13045 1269 aa12.71□□□□□ -0.38
RBFOX1-202ENST00000340209 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.38
RBFOX1-202ENST00000340209 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 PLEKHO1Q53GL0 409 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 MYL6BP14649 208 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 CCDC30Q5VVM6 783 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 KAT6BQ8WYB5 2073 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 MON2Q7Z3U7 1717 aa12.7□□□□□ -0.38
RBFOX1-202ENST00000340209 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 ADGRL3Q9HAR2 1447 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
RBFOX1-202ENST00000340209 HSP90AA1P07900 732 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 CHMP4BQ9H444 224 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 HDAC1Q13547 482 aaPredicted RBP12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 ZNF335Q9H4Z2 1342 aaPredicted RBP12.68□□□□□ -0.38
RBFOX1-202ENST00000340209 DDX54Q8TDD1 881 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-202ENST00000340209 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
RBFOX1-202ENST00000340209 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
RBFOX1-202ENST00000340209 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-202ENST00000340209 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 USP19O94966 1318 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 BECN1Q14457 450 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 ABCC4O15439 1325 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 ANKARQ7Z5J8 1434 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 NUCB1Q02818 461 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 AAMPQ13685 434 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
RBFOX1-202ENST00000340209 MAP4K4O95819 1239 aaPredicted RBP12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 PI4KAP2A4QPH2 592 aa12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 PI4KAP1Q8N8J0 262 aa12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
RBFOX1-202ENST00000340209 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 EVA1CP58658 441 aa12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
RBFOX1-202ENST00000340209 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms