RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CCDC8Q9H0W5 538 aaPredicted RBP17.74■□□□□ 0.43
RET-201ENST00000340058 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
RET-201ENST00000340058 FKBP4Q02790 459 aaKnown RBP eCLIP17.74■□□□□ 0.43
RET-201ENST00000340058 TRDNQ13061 729 aa17.74■□□□□ 0.43
RET-201ENST00000340058 TBC1D2Q9BYX2 928 aa17.74■□□□□ 0.43
RET-201ENST00000340058 UHRF1BP1LA0JNW5 1464 aa17.74■□□□□ 0.43
RET-201ENST00000340058 ATP2B1P20020 1258 aa17.74■□□□□ 0.43
RET-201ENST00000340058 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
RET-201ENST00000340058 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
RET-201ENST00000340058 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
RET-201ENST00000340058 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
RET-201ENST00000340058 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
RET-201ENST00000340058 K7ELQ4 463 aaPredicted RBP17.73■□□□□ 0.43
RET-201ENST00000340058 MBD5Q9P267 1494 aa17.72■□□□□ 0.43
RET-201ENST00000340058 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
RET-201ENST00000340058 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
RET-201ENST00000340058 SEC24BO95487 1268 aa17.72■□□□□ 0.43
RET-201ENST00000340058 MTHFSDQ2M296 383 aaKnown RBP17.72■□□□□ 0.43
RET-201ENST00000340058 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
RET-201ENST00000340058 MYD88Q99836 296 aa17.72■□□□□ 0.43
RET-201ENST00000340058 CNNM1Q9NRU3 951 aa17.72■□□□□ 0.43
RET-201ENST00000340058 ADGRL2O95490 1459 aa17.71■□□□□ 0.43
RET-201ENST00000340058 PHF14O94880 888 aa17.71■□□□□ 0.43
RET-201ENST00000340058 MX1P20591 662 aa17.71■□□□□ 0.43
RET-201ENST00000340058 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.42
RET-201ENST00000340058 RRP12Q5JTH9 1297 aaKnown RBP17.7■□□□□ 0.42
RET-201ENST00000340058 BECN2A8MW95 431 aa17.7■□□□□ 0.42
RET-201ENST00000340058 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
RET-201ENST00000340058 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
RET-201ENST00000340058 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
RET-201ENST00000340058 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
RET-201ENST00000340058 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
RET-201ENST00000340058 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
RET-201ENST00000340058 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
RET-201ENST00000340058 ANKRD24Q8TF21 1146 aa17.7■□□□□ 0.42
RET-201ENST00000340058 DNAAF4Q8WXU2 420 aa17.7■□□□□ 0.42
RET-201ENST00000340058 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
RET-201ENST00000340058 VAMP4O75379 141 aa17.69■□□□□ 0.42
RET-201ENST00000340058 CLSTN1O94985 981 aa17.69■□□□□ 0.42
RET-201ENST00000340058 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
RET-201ENST00000340058 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
RET-201ENST00000340058 NSD2O96028 1365 aa17.69■□□□□ 0.42
RET-201ENST00000340058 MCM4P33991 863 aa17.69■□□□□ 0.42
RET-201ENST00000340058 EYA1Q99502 592 aa17.69■□□□□ 0.42
RET-201ENST00000340058 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
RET-201ENST00000340058 LRRFIP1Q32MZ4 808 aaKnown RBP17.68■□□□□ 0.42
RET-201ENST00000340058 JAKMIP1Q96N16 626 aaKnown RBP17.68■□□□□ 0.42
RET-201ENST00000340058 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
RET-201ENST00000340058 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
RET-201ENST00000340058 PES1O00541 588 aaKnown RBP17.67■□□□□ 0.42
RET-201ENST00000340058 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
RET-201ENST00000340058 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
RET-201ENST00000340058 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
RET-201ENST00000340058 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
RET-201ENST00000340058 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
RET-201ENST00000340058 ARHGEF12Q9NZN5 1544 aa17.66■□□□□ 0.42
RET-201ENST00000340058 GPTP24298 496 aa17.66■□□□□ 0.42
RET-201ENST00000340058 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
RET-201ENST00000340058 GOLGA6L19H0YKK7 550 aa17.66■□□□□ 0.42
RET-201ENST00000340058 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
RET-201ENST00000340058 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
RET-201ENST00000340058 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
RET-201ENST00000340058 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
RET-201ENST00000340058 MRPL50Q8N5N7 158 aaKnown RBP17.65■□□□□ 0.42
RET-201ENST00000340058 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
RET-201ENST00000340058 NASPP49321 788 aaPredicted RBP17.65■□□□□ 0.42
RET-201ENST00000340058 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
RET-201ENST00000340058 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
RET-201ENST00000340058 G2E3Q7L622 706 aa17.64■□□□□ 0.41
RET-201ENST00000340058 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
RET-201ENST00000340058 UBE3BQ7Z3V4 1068 aa17.64■□□□□ 0.41
RET-201ENST00000340058 DBF4Q9UBU7 674 aaPredicted RBP17.64■□□□□ 0.41
RET-201ENST00000340058 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
RET-201ENST00000340058 A0A087WZG4 1122 aa17.64■□□□□ 0.41
RET-201ENST00000340058 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
RET-201ENST00000340058 TRIM35Q9UPQ4 493 aa17.64■□□□□ 0.41
RET-201ENST00000340058 PRPF40BQ6NWY9 871 aaKnown RBP17.63■□□□□ 0.41
RET-201ENST00000340058 YEATS2Q9ULM3 1422 aa17.63■□□□□ 0.41
RET-201ENST00000340058 TRIM29Q14134 588 aa17.63■□□□□ 0.41
RET-201ENST00000340058 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
RET-201ENST00000340058 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
RET-201ENST00000340058 MARCH6O60337 910 aa17.62■□□□□ 0.41
RET-201ENST00000340058 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
RET-201ENST00000340058 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
RET-201ENST00000340058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
RET-201ENST00000340058 NPATQ14207 1427 aa17.62■□□□□ 0.41
RET-201ENST00000340058 PSMA5P28066 241 aa17.62■□□□□ 0.41
RET-201ENST00000340058 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
RET-201ENST00000340058 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
RET-201ENST00000340058 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
RET-201ENST00000340058 SSFA2P28290 1259 aa17.62■□□□□ 0.41
RET-201ENST00000340058 LTKP29376 864 aa17.62■□□□□ 0.41
RET-201ENST00000340058 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
RET-201ENST00000340058 UGGT1Q9NYU2 1555 aa17.62■□□□□ 0.41
RET-201ENST00000340058 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
RET-201ENST00000340058 IL16Q14005 1332 aa17.61■□□□□ 0.41
RET-201ENST00000340058 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
RET-201ENST00000340058 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
RET-201ENST00000340058 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
RET-201ENST00000340058 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms