RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
DFFB-202ENST00000339350 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
DFFB-202ENST00000339350 MYO5BQ9ULV0 1848 aa15.39■□□□□ 0.05
DFFB-202ENST00000339350 CAPN2P17655 700 aa15.39■□□□□ 0.05
DFFB-202ENST00000339350 DIP2BQ9P265 1576 aa15.39■□□□□ 0.05
DFFB-202ENST00000339350 NUCB1Q02818 461 aa15.39■□□□□ 0.05
DFFB-202ENST00000339350 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
DFFB-202ENST00000339350 PDCL2Q8N4E4 241 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
DFFB-202ENST00000339350 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 ADGRB2O60241 1585 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
DFFB-202ENST00000339350 NEURL4Q96JN8 1562 aa15.37■□□□□ 0.05
DFFB-202ENST00000339350 CCDC9Q9Y3X0 531 aaKnown RBP15.37■□□□□ 0.05
DFFB-202ENST00000339350 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
DFFB-202ENST00000339350 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
DFFB-202ENST00000339350 PTMSP20962 102 aa15.37■□□□□ 0.05
DFFB-202ENST00000339350 GBP4Q96PP9 640 aa15.37■□□□□ 0.05
DFFB-202ENST00000339350 ARHGEF28Q8N1W1 1705 aaKnown RBP15.36■□□□□ 0.05
DFFB-202ENST00000339350 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 TIGD1Q96MW7 591 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 KIF16BQ96L93 1317 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 CEBPAP49715 358 aaPredicted RBP15.36■□□□□ 0.05
DFFB-202ENST00000339350 TXNDC2Q86VQ3 553 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 CDK19Q9BWU1 502 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
DFFB-202ENST00000339350 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
DFFB-202ENST00000339350 APBB1O00213 710 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
DFFB-202ENST00000339350 PRR29P0C7W0 189 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 PDLIM2Q96JY6 352 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 BCL2L12Q9HB09 334 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
DFFB-202ENST00000339350 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 AXDND1Q5T1B0 1012 aaPredicted RBP15.34■□□□□ 0.05
DFFB-202ENST00000339350 CFAP44Q96MT7 982 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 KIF2CQ99661 725 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 TERF2IPQ9NYB0 399 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
DFFB-202ENST00000339350 NSD2O96028 1365 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 MCM5P33992 734 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 TBC1D9Q6ZT07 1266 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
DFFB-202ENST00000339350 RBM25P49756 843 aaKnown RBP15.33■□□□□ 0.05
DFFB-202ENST00000339350 RBSNQ9H1K0 784 aa15.33■□□□□ 0.05
DFFB-202ENST00000339350 PPIP5K1Q6PFW1 1433 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 CCDC66A2RUB6 948 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 FAM83GA6ND36 823 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 SSFA2P28290 1259 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
DFFB-202ENST00000339350 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
DFFB-202ENST00000339350 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 SIRT2Q8IXJ6 389 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 EMILIN1Q9Y6C2 1016 aa15.33■□□□□ 0.04
DFFB-202ENST00000339350 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.04
DFFB-202ENST00000339350 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
DFFB-202ENST00000339350 EP400NLQ6ZTU2 488 aa15.31■□□□□ 0.04
DFFB-202ENST00000339350 DDIT3P35638 169 aa15.31■□□□□ 0.04
DFFB-202ENST00000339350 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
DFFB-202ENST00000339350 PRIMPOLQ96LW4 560 aa15.31■□□□□ 0.04
DFFB-202ENST00000339350 VAMP4O75379 141 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 GTF2F1P35269 517 aaKnown RBP eCLIP15.3■□□□□ 0.04
DFFB-202ENST00000339350 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 TICAM2Q86XR7 235 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
DFFB-202ENST00000339350 CCDC39Q9UFE4 941 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 SLFN14P0C7P3 912 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
DFFB-202ENST00000339350 LOC102724159A0A0B4J2E5 919 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 HMGN5P82970 282 aaKnown RBP15.3■□□□□ 0.04
DFFB-202ENST00000339350 PWP2Q15269 919 aaKnown RBP15.3■□□□□ 0.04
DFFB-202ENST00000339350 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
DFFB-202ENST00000339350 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
DFFB-202ENST00000339350 TULP2O00295 520 aa15.29■□□□□ 0.04
DFFB-202ENST00000339350 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
DFFB-202ENST00000339350 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
DFFB-202ENST00000339350 IL16Q14005 1332 aa15.29■□□□□ 0.04
DFFB-202ENST00000339350 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
DFFB-202ENST00000339350 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 ALDH1L2Q3SY69 923 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
DFFB-202ENST00000339350 SNX21Q969T3 373 aa15.28■□□□□ 0.04
DFFB-202ENST00000339350 MPNDQ8N594 471 aa15.27■□□□□ 0.04
DFFB-202ENST00000339350 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
DFFB-202ENST00000339350 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.04
DFFB-202ENST00000339350 FCHSD2O94868 740 aa15.27■□□□□ 0.04
DFFB-202ENST00000339350 GABPB1Q06547 395 aaPredicted RBP15.27■□□□□ 0.04
DFFB-202ENST00000339350 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms