RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 KDRP35968 1356 aa16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 CHL1O00533 1208 aa16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ILDR1Q86SU0 546 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 RGS12O14924 1447 aa16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
CDK5RAP1-201ENST00000339269 FLT4P35916 1363 aa16.47■□□□□ 0.23
CDK5RAP1-201ENST00000339269 SOX12O15370 315 aa16.47■□□□□ 0.23
CDK5RAP1-201ENST00000339269 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
CDK5RAP1-201ENST00000339269 IGSF1Q8N6C5 1336 aa16.46■□□□□ 0.22
CDK5RAP1-201ENST00000339269 ATF3P18847 181 aa16.46■□□□□ 0.22
CDK5RAP1-201ENST00000339269 MCM10Q7L590 875 aa16.46■□□□□ 0.22
CDK5RAP1-201ENST00000339269 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.22
CDK5RAP1-201ENST00000339269 SIRT2Q8IXJ6 389 aa16.45■□□□□ 0.22
CDK5RAP1-201ENST00000339269 FOXO3O43524 673 aa16.44■□□□□ 0.22
CDK5RAP1-201ENST00000339269 NUCB1Q02818 461 aa16.44■□□□□ 0.22
CDK5RAP1-201ENST00000339269 CADPS2Q86UW7 1296 aa16.44■□□□□ 0.22
CDK5RAP1-201ENST00000339269 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
CDK5RAP1-201ENST00000339269 DCCP43146 1447 aa16.43■□□□□ 0.22
CDK5RAP1-201ENST00000339269 KIAA0232Q92628 1395 aa16.43■□□□□ 0.22
CDK5RAP1-201ENST00000339269 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP1-201ENST00000339269 EYA1Q99502 592 aa16.43■□□□□ 0.22
CDK5RAP1-201ENST00000339269 TBC1D32Q96NH3 1257 aa16.42■□□□□ 0.22
CDK5RAP1-201ENST00000339269 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
CDK5RAP1-201ENST00000339269 LRRC37A3O60309 1634 aa16.42■□□□□ 0.22
CDK5RAP1-201ENST00000339269 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
CDK5RAP1-201ENST00000339269 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
CDK5RAP1-201ENST00000339269 HOXC9P31274 260 aa16.39■□□□□ 0.22
CDK5RAP1-201ENST00000339269 DEKP35659 375 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-201ENST00000339269 NLRP6P59044 892 aa16.39■□□□□ 0.21
CDK5RAP1-201ENST00000339269 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
CDK5RAP1-201ENST00000339269 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP1-201ENST00000339269 MST1RQ04912 1400 aa16.38■□□□□ 0.21
CDK5RAP1-201ENST00000339269 AMPHP49418 695 aa16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 CHD1LQ86WJ1 897 aa16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 NFAT5O94916 1531 aa16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 LNPKQ9C0E8 428 aa16.37■□□□□ 0.21
CDK5RAP1-201ENST00000339269 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
CDK5RAP1-201ENST00000339269 PHF8Q9UPP1 1060 aa16.35■□□□□ 0.21
CDK5RAP1-201ENST00000339269 C1orf167Q5SNV9 1468 aa16.35■□□□□ 0.21
CDK5RAP1-201ENST00000339269 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
CDK5RAP1-201ENST00000339269 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
CDK5RAP1-201ENST00000339269 HSPA1LP34931 641 aa16.33■□□□□ 0.21
CDK5RAP1-201ENST00000339269 ABTB2Q8N961 1025 aa16.33■□□□□ 0.21
CDK5RAP1-201ENST00000339269 GCC1Q96CN9 775 aa16.33■□□□□ 0.21
CDK5RAP1-201ENST00000339269 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
CDK5RAP1-201ENST00000339269 NFKBIBQ15653 356 aa16.33■□□□□ 0.2
CDK5RAP1-201ENST00000339269 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP1-201ENST00000339269 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP1-201ENST00000339269 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
CDK5RAP1-201ENST00000339269 GAS2L2Q8NHY3 880 aa16.32■□□□□ 0.2
CDK5RAP1-201ENST00000339269 G2E3Q7L622 706 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 PTPRCP08575 1304 aa16.31■□□□□ 0.2
CDK5RAP1-201ENST00000339269 LTN1O94822 1766 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
CDK5RAP1-201ENST00000339269 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 MEIS3Q99687 375 aa16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
CDK5RAP1-201ENST00000339269 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 CEP85Q6P2H3 762 aa16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 IP6K1Q92551 441 aa16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 FAM208AQ9UK61 1670 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP1-201ENST00000339269 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
CDK5RAP1-201ENST00000339269 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
CDK5RAP1-201ENST00000339269 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
CDK5RAP1-201ENST00000339269 COL16A1Q07092 1604 aaPredicted RBP16.27■□□□□ 0.19
CDK5RAP1-201ENST00000339269 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP1-201ENST00000339269 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.19
CDK5RAP1-201ENST00000339269 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
CDK5RAP1-201ENST00000339269 SLIT3O75094 1523 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 F6X3S4 739 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 BECN1Q14457 450 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 PLEKHM2Q8IWE5 1019 aa16.25■□□□□ 0.19
CDK5RAP1-201ENST00000339269 FRAT2O75474 233 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms