RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
FOXR2-201ENST00000339140 SLIT1O75093 1534 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 REC8O95072 547 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 HMGN5P82970 282 aaKnown RBP11.06□□□□□ -0.64
FOXR2-201ENST00000339140 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
FOXR2-201ENST00000339140 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
FOXR2-201ENST00000339140 CEP170BQ9Y4F5 1589 aaPredicted RBP11.06□□□□□ -0.64
FOXR2-201ENST00000339140 PHF14O94880 888 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 MCM2P49736 904 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 PRIMPOLQ96LW4 560 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 NRXN3Q9Y4C0 1643 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 PTPRMP28827 1452 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
FOXR2-201ENST00000339140 GPT2Q8TD30 523 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
FOXR2-201ENST00000339140 VAMP4O75379 141 aa11.04□□□□□ -0.64
FOXR2-201ENST00000339140 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
FOXR2-201ENST00000339140 GNAI1P63096 354 aa11.04□□□□□ -0.64
FOXR2-201ENST00000339140 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
FOXR2-201ENST00000339140 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
FOXR2-201ENST00000339140 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
FOXR2-201ENST00000339140 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
FOXR2-201ENST00000339140 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
FOXR2-201ENST00000339140 DCTPP1Q9H773 170 aa11.04□□□□□ -0.64
FOXR2-201ENST00000339140 FAM135BQ49AJ0 1406 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 IFT57Q9NWB7 429 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 SYCE3A1L190 88 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 MYRIPQ8NFW9 859 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
FOXR2-201ENST00000339140 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
FOXR2-201ENST00000339140 TMEM132EQ6IEE7 984 aa11.02□□□□□ -0.65
FOXR2-201ENST00000339140 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
FOXR2-201ENST00000339140 LRRC7Q96NW7 1537 aa11.02□□□□□ -0.65
FOXR2-201ENST00000339140 LMOD3Q0VAK6 560 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 PKP1Q13835 747 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 GGNBP2Q9H3C7 697 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 PLEKHG1Q9ULL1 1385 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 KIF20BQ96Q89 1820 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 FYB1O15117 783 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 RPAP2Q8IXW5 612 aaPredicted RBP11.01□□□□□ -0.65
FOXR2-201ENST00000339140 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
FOXR2-201ENST00000339140 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
FOXR2-201ENST00000339140 ERC2O15083 957 aa11□□□□□ -0.65
FOXR2-201ENST00000339140 LTKP29376 864 aa11□□□□□ -0.65
FOXR2-201ENST00000339140 GTF2F1P35269 517 aaKnown RBP eCLIP11□□□□□ -0.65
FOXR2-201ENST00000339140 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
FOXR2-201ENST00000339140 ZGPATQ8N5A5 531 aaKnown RBP11□□□□□ -0.65
FOXR2-201ENST00000339140 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
FOXR2-201ENST00000339140 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
FOXR2-201ENST00000339140 EID1Q9Y6B2 187 aa11□□□□□ -0.65
FOXR2-201ENST00000339140 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
FOXR2-201ENST00000339140 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
FOXR2-201ENST00000339140 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
FOXR2-201ENST00000339140 DMTNQ08495 405 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
FOXR2-201ENST00000339140 TXNDC2Q86VQ3 553 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 DLC1Q96QB1 1528 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 PRKAR2BP31323 418 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 TWISTNBQ3B726 338 aaPredicted RBP10.99□□□□□ -0.65
FOXR2-201ENST00000339140 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
FOXR2-201ENST00000339140 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
FOXR2-201ENST00000339140 BRD1O95696 1058 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 ZNF853P0CG23 659 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 SDSP20132 328 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 MCCP23508 829 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 POTEDQ86YR6 584 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
FOXR2-201ENST00000339140 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
FOXR2-201ENST00000339140 ADAMTS13Q76LX8 1427 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 DIP2AQ14689 1571 aa10.98□□□□□ -0.65
FOXR2-201ENST00000339140 ANAPC15P60006 121 aa10.97□□□□□ -0.65
FOXR2-201ENST00000339140 CUL4AQ13619 759 aa10.97□□□□□ -0.65
FOXR2-201ENST00000339140 RNF214Q8ND24 703 aa10.97□□□□□ -0.65
FOXR2-201ENST00000339140 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
FOXR2-201ENST00000339140 HMMRO75330 724 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 KIF20AO95235 890 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 TPM3P06753 285 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 TSPYL6Q8N831 410 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 TMX3Q96JJ7 454 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 MBIPQ9NS73 344 aa10.96□□□□□ -0.65
FOXR2-201ENST00000339140 NOLC1Q14978 699 aaKnown RBP eCLIP10.96□□□□□ -0.66
FOXR2-201ENST00000339140 SIRT1Q96EB6 747 aa10.96□□□□□ -0.66
FOXR2-201ENST00000339140 TBX22Q9Y458 520 aa10.96□□□□□ -0.66
FOXR2-201ENST00000339140 KIF3AQ9Y496 699 aa10.96□□□□□ -0.66
FOXR2-201ENST00000339140 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
FOXR2-201ENST00000339140 TECPR2O15040 1411 aa10.95□□□□□ -0.66
FOXR2-201ENST00000339140 CPSF1Q10570 1443 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms