RNA–Protein interactions for RNA: ENST00000338732.7

LFNG-202, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 1,968 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-202ENST00000338732 ATF3P18847 181 aa20.02■□□□□ 0.8
LFNG-202ENST00000338732 KRT28Q7Z3Y7 464 aa20.02■□□□□ 0.8
LFNG-202ENST00000338732 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
LFNG-202ENST00000338732 SLIT3O75094 1523 aa20.01■□□□□ 0.79
LFNG-202ENST00000338732 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
LFNG-202ENST00000338732 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
LFNG-202ENST00000338732 PCDHB15Q9Y5E8 787 aa20.01■□□□□ 0.79
LFNG-202ENST00000338732 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
LFNG-202ENST00000338732 IPO8O15397 1037 aaKnown RBP20■□□□□ 0.79
LFNG-202ENST00000338732 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
LFNG-202ENST00000338732 GAS2L2Q8NHY3 880 aa20■□□□□ 0.79
LFNG-202ENST00000338732 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
LFNG-202ENST00000338732 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
LFNG-202ENST00000338732 RTL5Q5HYW3 569 aaPredicted RBP19.99■□□□□ 0.79
LFNG-202ENST00000338732 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
LFNG-202ENST00000338732 CRB1P82279 1406 aa19.99■□□□□ 0.79
LFNG-202ENST00000338732 CHL1O00533 1208 aa19.98■□□□□ 0.79
LFNG-202ENST00000338732 GCP02774 474 aa19.98■□□□□ 0.79
LFNG-202ENST00000338732 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
LFNG-202ENST00000338732 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
LFNG-202ENST00000338732 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
LFNG-202ENST00000338732 RTF1Q92541 710 aaKnown RBP19.97■□□□□ 0.79
LFNG-202ENST00000338732 USP19O94966 1318 aa19.97■□□□□ 0.79
LFNG-202ENST00000338732 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
LFNG-202ENST00000338732 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
LFNG-202ENST00000338732 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 ALS2Q96Q42 1657 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
LFNG-202ENST00000338732 CADPS2Q86UW7 1296 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
LFNG-202ENST00000338732 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
LFNG-202ENST00000338732 ITPRIPQ8IWB1 547 aa19.94■□□□□ 0.78
LFNG-202ENST00000338732 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
LFNG-202ENST00000338732 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
LFNG-202ENST00000338732 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
LFNG-202ENST00000338732 ARHGAP45Q92619 1136 aa19.93■□□□□ 0.78
LFNG-202ENST00000338732 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
LFNG-202ENST00000338732 MSH6P52701 1360 aa19.93■□□□□ 0.78
LFNG-202ENST00000338732 KIAA0232Q92628 1395 aa19.93■□□□□ 0.78
LFNG-202ENST00000338732 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
LFNG-202ENST00000338732 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
LFNG-202ENST00000338732 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
LFNG-202ENST00000338732 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
LFNG-202ENST00000338732 PDZRN3Q9UPQ7 1066 aa19.91■□□□□ 0.78
LFNG-202ENST00000338732 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
LFNG-202ENST00000338732 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
LFNG-202ENST00000338732 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
LFNG-202ENST00000338732 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
LFNG-202ENST00000338732 HDAC1Q13547 482 aaPredicted RBP19.9■□□□□ 0.78
LFNG-202ENST00000338732 MED1Q15648 1581 aaPredicted RBP19.9■□□□□ 0.78
LFNG-202ENST00000338732 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
LFNG-202ENST00000338732 TSPYL4Q9UJ04 414 aa19.89■□□□□ 0.77
LFNG-202ENST00000338732 NPHP3Q7Z494 1330 aa19.88■□□□□ 0.77
LFNG-202ENST00000338732 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
LFNG-202ENST00000338732 ANKRD24Q8TF21 1146 aa19.86■□□□□ 0.77
LFNG-202ENST00000338732 ZBTB40Q9NUA8 1239 aa19.86■□□□□ 0.77
LFNG-202ENST00000338732 ABCC4O15439 1325 aa19.86■□□□□ 0.77
LFNG-202ENST00000338732 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
LFNG-202ENST00000338732 IL17REQ8NFR9 667 aa19.86■□□□□ 0.77
LFNG-202ENST00000338732 API5Q9BZZ5 524 aaKnown RBP19.85■□□□□ 0.77
LFNG-202ENST00000338732 AXIN2Q9Y2T1 843 aa19.85■□□□□ 0.77
LFNG-202ENST00000338732 PXDNQ92626 1479 aa19.84■□□□□ 0.77
LFNG-202ENST00000338732 CAMTA1Q9Y6Y1 1673 aa19.84■□□□□ 0.77
LFNG-202ENST00000338732 TNS3Q68CZ2 1445 aa19.84■□□□□ 0.77
LFNG-202ENST00000338732 SLC4A3P48751 1232 aa19.84■□□□□ 0.77
LFNG-202ENST00000338732 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
LFNG-202ENST00000338732 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
LFNG-202ENST00000338732 SEC24BO95487 1268 aa19.83■□□□□ 0.77
LFNG-202ENST00000338732 RGPD5Q99666 1765 aa19.82■□□□□ 0.76
LFNG-202ENST00000338732 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
LFNG-202ENST00000338732 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
LFNG-202ENST00000338732 CHMP4BQ9H444 224 aaKnown RBP19.81■□□□□ 0.76
LFNG-202ENST00000338732 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
LFNG-202ENST00000338732 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
LFNG-202ENST00000338732 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
LFNG-202ENST00000338732 SPATA31A3Q5VYP0 1347 aa19.8■□□□□ 0.76
LFNG-202ENST00000338732 CEMIPQ8WUJ3 1361 aa19.8■□□□□ 0.76
LFNG-202ENST00000338732 PLEKHO1Q53GL0 409 aaPredicted RBP19.8■□□□□ 0.76
LFNG-202ENST00000338732 LMO7Q8WWI1 1683 aa19.8■□□□□ 0.76
LFNG-202ENST00000338732 ERBB3P21860 1342 aa19.8■□□□□ 0.76
LFNG-202ENST00000338732 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
LFNG-202ENST00000338732 RGS12O14924 1447 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 CRYBG1Q9Y4K1 1723 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
LFNG-202ENST00000338732 PTPRCP08575 1304 aa19.78■□□□□ 0.76
LFNG-202ENST00000338732 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
LFNG-202ENST00000338732 ZNF530Q6P9A1 599 aaPredicted RBP19.77■□□□□ 0.76
LFNG-202ENST00000338732 COL18A1P39060 1754 aa19.77■□□□□ 0.76
LFNG-202ENST00000338732 NFKBIBQ15653 356 aa19.77■□□□□ 0.75
LFNG-202ENST00000338732 TBC1D32Q96NH3 1257 aa19.77■□□□□ 0.75
LFNG-202ENST00000338732 LGR6Q9HBX8 967 aa19.76■□□□□ 0.75
LFNG-202ENST00000338732 BECN1Q14457 450 aa19.75■□□□□ 0.75
LFNG-202ENST00000338732 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
LFNG-202ENST00000338732 INTS3Q68E01 1043 aaKnown RBP19.75■□□□□ 0.75
LFNG-202ENST00000338732 ABCC6O95255 1503 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms