RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FBLN1P23142 703 aa14.83□□□□□ -0.04
CAPN3-202ENST00000337571 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.04
CAPN3-202ENST00000337571 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-202ENST00000337571 SLC15A2Q16348 729 aa14.82□□□□□ -0.04
CAPN3-202ENST00000337571 ANO8Q9HCE9 1232 aaPredicted RBP14.82□□□□□ -0.04
CAPN3-202ENST00000337571 NHSQ6T4R5 1651 aa14.81□□□□□ -0.04
CAPN3-202ENST00000337571 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
CAPN3-202ENST00000337571 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
CAPN3-202ENST00000337571 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
CAPN3-202ENST00000337571 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
CAPN3-202ENST00000337571 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
CAPN3-202ENST00000337571 SMG6Q86US8 1419 aaKnown RBP14.79□□□□□ -0.04
CAPN3-202ENST00000337571 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
CAPN3-202ENST00000337571 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
CAPN3-202ENST00000337571 PDGFDQ9GZP0 370 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-202ENST00000337571 BTAF1O14981 1849 aa14.78□□□□□ -0.04
CAPN3-202ENST00000337571 ABCB7O75027 752 aa14.77□□□□□ -0.05
CAPN3-202ENST00000337571 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
CAPN3-202ENST00000337571 NBPF6Q5VWK0 638 aa14.77□□□□□ -0.05
CAPN3-202ENST00000337571 NBPF4Q96M43 638 aa14.77□□□□□ -0.05
CAPN3-202ENST00000337571 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.05
CAPN3-202ENST00000337571 RGPD2P0DJD1 1756 aa14.77□□□□□ -0.05
CAPN3-202ENST00000337571 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
CAPN3-202ENST00000337571 CASZ1Q86V15 1759 aa14.76□□□□□ -0.05
CAPN3-202ENST00000337571 CGNL1Q0VF96 1302 aa14.76□□□□□ -0.05
CAPN3-202ENST00000337571 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
CAPN3-202ENST00000337571 PPM1GO15355 546 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-202ENST00000337571 TATP17735 454 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-202ENST00000337571 HSP90AB2PQ58FF8 381 aa14.75□□□□□ -0.05
CAPN3-202ENST00000337571 MTFR1LQ9H019 292 aa14.75□□□□□ -0.05
CAPN3-202ENST00000337571 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
CAPN3-202ENST00000337571 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
CAPN3-202ENST00000337571 INSRP06213 1382 aa14.73□□□□□ -0.05
CAPN3-202ENST00000337571 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
CAPN3-202ENST00000337571 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
CAPN3-202ENST00000337571 FLT4P35916 1363 aa14.73□□□□□ -0.05
CAPN3-202ENST00000337571 YY1P25490 414 aa14.72□□□□□ -0.05
CAPN3-202ENST00000337571 PTGER2P43116 358 aa14.72□□□□□ -0.05
CAPN3-202ENST00000337571 LRRC4BQ9NT99 713 aa14.72□□□□□ -0.05
CAPN3-202ENST00000337571 TFCP2L1Q9NZI6 479 aa14.72□□□□□ -0.05
CAPN3-202ENST00000337571 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
CAPN3-202ENST00000337571 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
CAPN3-202ENST00000337571 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
CAPN3-202ENST00000337571 MEGF6O75095 1541 aa14.71□□□□□ -0.06
CAPN3-202ENST00000337571 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPN3-202ENST00000337571 ZNF827Q17R98 1081 aa14.7□□□□□ -0.06
CAPN3-202ENST00000337571 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
CAPN3-202ENST00000337571 ARXQ96QS3 562 aa14.7□□□□□ -0.06
CAPN3-202ENST00000337571 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
CAPN3-202ENST00000337571 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
CAPN3-202ENST00000337571 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
CAPN3-202ENST00000337571 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-202ENST00000337571 CCNL1Q9UK58 526 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-202ENST00000337571 EMILIN1Q9Y6C2 1016 aa14.69□□□□□ -0.06
CAPN3-202ENST00000337571 MYOM1P52179 1685 aa14.68□□□□□ -0.06
CAPN3-202ENST00000337571 POLD1P28340 1107 aa14.68□□□□□ -0.06
CAPN3-202ENST00000337571 KCNQ4P56696 695 aa14.68□□□□□ -0.06
CAPN3-202ENST00000337571 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
CAPN3-202ENST00000337571 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
CAPN3-202ENST00000337571 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
CAPN3-202ENST00000337571 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
CAPN3-202ENST00000337571 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
CAPN3-202ENST00000337571 SPG7Q9UQ90 795 aa14.67□□□□□ -0.06
CAPN3-202ENST00000337571 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
CAPN3-202ENST00000337571 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
CAPN3-202ENST00000337571 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-202ENST00000337571 HSPA5P11021 654 aaKnown RBP14.65□□□□□ -0.06
CAPN3-202ENST00000337571 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
CAPN3-202ENST00000337571 LY75O60449 1722 aa14.65□□□□□ -0.06
CAPN3-202ENST00000337571 NSD2O96028 1365 aa14.64□□□□□ -0.07
CAPN3-202ENST00000337571 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
CAPN3-202ENST00000337571 PANK3Q9H999 370 aa14.64□□□□□ -0.07
CAPN3-202ENST00000337571 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
CAPN3-202ENST00000337571 PNPLA7Q6ZV29 1317 aa14.64□□□□□ -0.07
CAPN3-202ENST00000337571 QSER1Q2KHR3 1735 aa14.63□□□□□ -0.07
CAPN3-202ENST00000337571 CYP27B1O15528 508 aa14.63□□□□□ -0.07
CAPN3-202ENST00000337571 POLA2Q14181 598 aa14.63□□□□□ -0.07
CAPN3-202ENST00000337571 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-202ENST00000337571 EYA1Q99502 592 aa14.62□□□□□ -0.07
CAPN3-202ENST00000337571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN3-202ENST00000337571 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
CAPN3-202ENST00000337571 GPR162Q16538 588 aa14.6□□□□□ -0.07
CAPN3-202ENST00000337571 IFNL2Q8IZJ0 200 aa14.6□□□□□ -0.07
CAPN3-202ENST00000337571 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
CAPN3-202ENST00000337571 ANKRD26Q9UPS8 1709 aa14.59□□□□□ -0.07
CAPN3-202ENST00000337571 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-202ENST00000337571 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
CAPN3-202ENST00000337571 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-202ENST00000337571 TMOD3Q9NYL9 352 aa14.59□□□□□ -0.07
CAPN3-202ENST00000337571 ITGB4P16144 1822 aa14.59□□□□□ -0.07
CAPN3-202ENST00000337571 MAP3K5Q99683 1374 aa14.59□□□□□ -0.07
CAPN3-202ENST00000337571 TUBGCP6Q96RT7 1819 aa14.58□□□□□ -0.08
CAPN3-202ENST00000337571 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
CAPN3-202ENST00000337571 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
CAPN3-202ENST00000337571 PIGBQ92521 554 aa14.58□□□□□ -0.08
CAPN3-202ENST00000337571 AK7Q96M32 723 aa14.58□□□□□ -0.08
CAPN3-202ENST00000337571 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
CAPN3-202ENST00000337571 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
CAPN3-202ENST00000337571 C5P01031 1676 aa14.57□□□□□ -0.08
CAPN3-202ENST00000337571 PHKG2P15735 406 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms