RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 WDR97A6NE52 1622 aa14.47□□□□□ -0.09
FN1-202ENST00000336916 TEX13AQ9BXU3 409 aaPredicted RBP14.47□□□□□ -0.09
FN1-202ENST00000336916 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
FN1-202ENST00000336916 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
FN1-202ENST00000336916 FGFR1OPO95684 399 aaKnown RBP14.46□□□□□ -0.09
FN1-202ENST00000336916 RBM5P52756 815 aaKnown RBP eCLIP14.46□□□□□ -0.091e-19■■□□□ 13
FN1-202ENST00000336916 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
FN1-202ENST00000336916 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
FN1-202ENST00000336916 DUOX2Q9NRD8 1548 aa14.46□□□□□ -0.09
FN1-202ENST00000336916 ATF7IPQ6VMQ6 1270 aa14.46□□□□□ -0.09
FN1-202ENST00000336916 SEPT7Q16181 437 aaKnown RBP14.46□□□□□ -0.09
FN1-202ENST00000336916 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.1
FN1-202ENST00000336916 CETN2P41208 172 aa14.46□□□□□ -0.1
FN1-202ENST00000336916 STK38Q15208 465 aa14.46□□□□□ -0.1
FN1-202ENST00000336916 PLEKHH1Q9ULM0 1364 aa14.46□□□□□ -0.1
FN1-202ENST00000336916 CCDC192P0DO97 292 aa14.46□□□□□ -0.1
FN1-202ENST00000336916 TMEM132EQ6IEE7 984 aa14.46□□□□□ -0.1
FN1-202ENST00000336916 PHAXQ9H814 394 aaKnown RBP14.46□□□□□ -0.1
FN1-202ENST00000336916 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
FN1-202ENST00000336916 HMGN5P82970 282 aaKnown RBP14.45□□□□□ -0.1
FN1-202ENST00000336916 EXOC6Q8TAG9 804 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
FN1-202ENST00000336916 NASPP49321 788 aaPredicted RBP14.45□□□□□ -0.1
FN1-202ENST00000336916 KRT85P78386 507 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 ATP2B2Q01814 1243 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 SULT6B1Q6IMI4 303 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 TTC21BQ7Z4L5 1316 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 TDO2P48775 406 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 ZSCAN31Q96LW9 406 aaPredicted RBP14.45□□□□□ -0.1
FN1-202ENST00000336916 NUTM2GQ5VZR2 741 aa14.45□□□□□ -0.1
FN1-202ENST00000336916 LARP1Q6PKG0 1096 aaKnown RBP14.44□□□□□ -0.1
FN1-202ENST00000336916 HMGB1P09429 215 aaKnown RBP14.44□□□□□ -0.1
FN1-202ENST00000336916 PPP2R1AP30153 589 aa14.44□□□□□ -0.1
FN1-202ENST00000336916 GBP2P32456 591 aaPredicted RBP14.44□□□□□ -0.1
FN1-202ENST00000336916 PPFIBP1Q86W92 1011 aa14.44□□□□□ -0.1
FN1-202ENST00000336916 CCDC150Q8NCX0 1101 aa14.44□□□□□ -0.1
FN1-202ENST00000336916 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
FN1-202ENST00000336916 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
FN1-202ENST00000336916 EZRP15311 586 aaKnown RBP14.44□□□□□ -0.1
FN1-202ENST00000336916 PPP1R1BQ9UD71 204 aaPredicted RBP14.43□□□□□ -0.1
FN1-202ENST00000336916 PDILTQ8N807 584 aa14.43□□□□□ -0.1
FN1-202ENST00000336916 PDCL3Q9H2J4 239 aa14.43□□□□□ -0.1
FN1-202ENST00000336916 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
FN1-202ENST00000336916 LRP2BPQ9P2M1 347 aa14.43□□□□□ -0.1
FN1-202ENST00000336916 MRE11P49959 708 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 TRAF1Q13077 416 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 IMMTQ16891 758 aaKnown RBP14.42□□□□□ -0.1
FN1-202ENST00000336916 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
FN1-202ENST00000336916 PYM1Q9BRP8 204 aaKnown RBP14.42□□□□□ -0.1
FN1-202ENST00000336916 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 HYPKQ9NX55 129 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
FN1-202ENST00000336916 GOLGA6L7A0A1B0GV03 622 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 TRIM5Q9C035 493 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 DDX54Q8TDD1 881 aaKnown RBP14.42□□□□□ -0.1
FN1-202ENST00000336916 DEF6Q9H4E7 631 aa14.42□□□□□ -0.1
FN1-202ENST00000336916 FANCAO15360 1455 aa14.41□□□□□ -0.1
FN1-202ENST00000336916 ZNF76P36508 570 aa14.41□□□□□ -0.1
FN1-202ENST00000336916 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
FN1-202ENST00000336916 CEP57L1Q8IYX8 460 aa14.41□□□□□ -0.1
FN1-202ENST00000336916 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
FN1-202ENST00000336916 NEK4P51957 841 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 KIF20AO95235 890 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 IFIT1P09914 478 aaKnown RBP14.4□□□□□ -0.1
FN1-202ENST00000336916 ZNF771Q7L3S4 317 aaPredicted RBP14.4□□□□□ -0.1
FN1-202ENST00000336916 RNF41Q9H4P4 317 aaPredicted RBP14.4□□□□□ -0.1
FN1-202ENST00000336916 A0A087WZG4 1122 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 CABP1Q9NZU7 370 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 SMTNL1A8MU46 457 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
FN1-202ENST00000336916 KIF1BPQ96EK5 621 aa14.4□□□□□ -0.11
FN1-202ENST00000336916 NFE2L2Q16236 605 aa14.39□□□□□ -0.11
FN1-202ENST00000336916 VPS36Q86VN1 386 aa14.39□□□□□ -0.11
FN1-202ENST00000336916 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
FN1-202ENST00000336916 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
FN1-202ENST00000336916 ADAMTS8Q9UP79 889 aa14.39□□□□□ -0.11
FN1-202ENST00000336916 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
FN1-202ENST00000336916 ALDH1L2Q3SY69 923 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
FN1-202ENST00000336916 RPGRQ92834 1020 aaKnown RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 KDM5AP29375 1690 aaKnown RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 PTPRCP08575 1304 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 TTF1Q15361 905 aaPredicted RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 JAKMIP3Q5VZ66 844 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 ME1P48163 572 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 CIZ1Q9ULV3 898 aaPredicted RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 GLRX3O76003 335 aaKnown RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 SPTY2D1Q68D10 685 aaPredicted RBP14.38□□□□□ -0.11
FN1-202ENST00000336916 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
FN1-202ENST00000336916 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 EIF3JO75822 258 aaKnown RBP14.37□□□□□ -0.11
FN1-202ENST00000336916 MYL6BP14649 208 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms