RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
LIMK1-201ENST00000336180 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
LIMK1-201ENST00000336180 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
LIMK1-201ENST00000336180 NRKQ7Z2Y5 1582 aa15.93■□□□□ 0.14
LIMK1-201ENST00000336180 DLG5Q8TDM6 1919 aa15.93■□□□□ 0.14
LIMK1-201ENST00000336180 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
LIMK1-201ENST00000336180 PIK3C2AO00443 1686 aa15.93■□□□□ 0.14
LIMK1-201ENST00000336180 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
LIMK1-201ENST00000336180 LGR6Q9HBX8 967 aa15.92■□□□□ 0.14
LIMK1-201ENST00000336180 CHL1O00533 1208 aa15.92■□□□□ 0.14
LIMK1-201ENST00000336180 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
LIMK1-201ENST00000336180 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
LIMK1-201ENST00000336180 ANXA1P04083 346 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 ANKRD45Q5TZF3 282 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
LIMK1-201ENST00000336180 MPRIPQ6WCQ1 1025 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 IGSF1Q8N6C5 1336 aa15.91■□□□□ 0.14
LIMK1-201ENST00000336180 ZBTB7BO15156 539 aaPredicted RBP15.9■□□□□ 0.14
LIMK1-201ENST00000336180 KCNQ3O43525 872 aa15.9■□□□□ 0.14
LIMK1-201ENST00000336180 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
LIMK1-201ENST00000336180 GCP02774 474 aa15.9■□□□□ 0.14
LIMK1-201ENST00000336180 NALCNQ8IZF0 1738 aa15.9■□□□□ 0.14
LIMK1-201ENST00000336180 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
LIMK1-201ENST00000336180 SPRYD3Q8NCJ5 442 aa15.89■□□□□ 0.13
LIMK1-201ENST00000336180 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
LIMK1-201ENST00000336180 PIK3R4Q99570 1358 aa15.88■□□□□ 0.13
LIMK1-201ENST00000336180 GNAT3A8MTJ3 354 aa15.88■□□□□ 0.13
LIMK1-201ENST00000336180 MFAP1P55081 439 aaKnown RBP15.88■□□□□ 0.13
LIMK1-201ENST00000336180 MEIS3Q99687 375 aa15.87■□□□□ 0.13
LIMK1-201ENST00000336180 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
LIMK1-201ENST00000336180 ATF3P18847 181 aa15.87■□□□□ 0.13
LIMK1-201ENST00000336180 GAS2L2Q8NHY3 880 aa15.87■□□□□ 0.13
LIMK1-201ENST00000336180 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
LIMK1-201ENST00000336180 ARHGEF10O15013 1369 aa15.86■□□□□ 0.13
LIMK1-201ENST00000336180 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
LIMK1-201ENST00000336180 C16orf71Q8IYS4 520 aaPredicted RBP15.86■□□□□ 0.13
LIMK1-201ENST00000336180 CRB1P82279 1406 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 IP6K1Q92551 441 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 TMEM94Q12767 1356 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
LIMK1-201ENST00000336180 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
LIMK1-201ENST00000336180 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
LIMK1-201ENST00000336180 FMN2Q9NZ56 1722 aa15.84■□□□□ 0.13
LIMK1-201ENST00000336180 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.13
LIMK1-201ENST00000336180 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
LIMK1-201ENST00000336180 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.12
LIMK1-201ENST00000336180 API5Q9BZZ5 524 aaKnown RBP15.83■□□□□ 0.12
LIMK1-201ENST00000336180 PHAXQ9H814 394 aaKnown RBP15.83■□□□□ 0.12
LIMK1-201ENST00000336180 USP19O94966 1318 aa15.83■□□□□ 0.12
LIMK1-201ENST00000336180 MSH6P52701 1360 aa15.83■□□□□ 0.12
LIMK1-201ENST00000336180 ABCC4O15439 1325 aa15.83■□□□□ 0.12
LIMK1-201ENST00000336180 C19orf44Q9H6X5 657 aa15.83■□□□□ 0.12
LIMK1-201ENST00000336180 CHD2O14647 1828 aaKnown RBP15.82■□□□□ 0.12
LIMK1-201ENST00000336180 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
LIMK1-201ENST00000336180 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
LIMK1-201ENST00000336180 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
LIMK1-201ENST00000336180 CHD1LQ86WJ1 897 aa15.81■□□□□ 0.12
LIMK1-201ENST00000336180 KDRP35968 1356 aa15.81■□□□□ 0.12
LIMK1-201ENST00000336180 SMC5Q8IY18 1101 aa15.81■□□□□ 0.12
LIMK1-201ENST00000336180 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
LIMK1-201ENST00000336180 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
LIMK1-201ENST00000336180 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
LIMK1-201ENST00000336180 ARHGEF25Q86VW2 580 aa15.8■□□□□ 0.12
LIMK1-201ENST00000336180 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
LIMK1-201ENST00000336180 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
LIMK1-201ENST00000336180 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
LIMK1-201ENST00000336180 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
LIMK1-201ENST00000336180 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
LIMK1-201ENST00000336180 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
LIMK1-201ENST00000336180 NUCB1Q02818 461 aa15.78■□□□□ 0.12
LIMK1-201ENST00000336180 TEFQ10587 303 aa15.78■□□□□ 0.12
LIMK1-201ENST00000336180 KCNH5Q8NCM2 988 aa15.78■□□□□ 0.12
LIMK1-201ENST00000336180 ARHGAP45Q92619 1136 aa15.78■□□□□ 0.12
LIMK1-201ENST00000336180 FLIIQ13045 1269 aa15.77■□□□□ 0.12
LIMK1-201ENST00000336180 ZNF335Q9H4Z2 1342 aaPredicted RBP15.77■□□□□ 0.11
LIMK1-201ENST00000336180 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.11
LIMK1-201ENST00000336180 EXOC6BQ9Y2D4 811 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 RGPD1P0DJD0 1748 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 NWD1Q149M9 1564 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 BTBD11A6QL63 1104 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 RGS12O14924 1447 aa15.76■□□□□ 0.11
LIMK1-201ENST00000336180 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
LIMK1-201ENST00000336180 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
LIMK1-201ENST00000336180 BRPF1P55201 1214 aaPredicted RBP15.75■□□□□ 0.11
LIMK1-201ENST00000336180 C1orf141Q5JVX7 400 aa15.75■□□□□ 0.11
LIMK1-201ENST00000336180 MARF1Q9Y4F3 1742 aaKnown RBP15.75■□□□□ 0.11
LIMK1-201ENST00000336180 AAMPQ13685 434 aa15.75■□□□□ 0.11
LIMK1-201ENST00000336180 RGPD2P0DJD1 1756 aa15.74■□□□□ 0.11
LIMK1-201ENST00000336180 AIMP1Q12904 312 aaKnown RBP15.74■□□□□ 0.11
LIMK1-201ENST00000336180 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
LIMK1-201ENST00000336180 KDM4FA0A1W2PPD8 638 aa15.74■□□□□ 0.11
LIMK1-201ENST00000336180 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
LIMK1-201ENST00000336180 CEP85Q6P2H3 762 aa15.74■□□□□ 0.11
LIMK1-201ENST00000336180 PXDNQ92626 1479 aa15.74■□□□□ 0.11
LIMK1-201ENST00000336180 PDE4CQ08493 712 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms