RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 INTS3Q68E01 1043 aaKnown RBP22.13■■□□□ 1.13
LRCH3-201ENST00000334859 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
LRCH3-201ENST00000334859 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
LRCH3-201ENST00000334859 RGS12O14924 1447 aa22.12■■□□□ 1.13
LRCH3-201ENST00000334859 CRB1P82279 1406 aa22.12■■□□□ 1.13
LRCH3-201ENST00000334859 MIS18AQ9NYP9 233 aa22.11■■□□□ 1.13
LRCH3-201ENST00000334859 PIK3C2AO00443 1686 aa22.11■■□□□ 1.13
LRCH3-201ENST00000334859 RBM25P49756 843 aaKnown RBP22.11■■□□□ 1.13
LRCH3-201ENST00000334859 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
LRCH3-201ENST00000334859 MSH6P52701 1360 aa22.11■■□□□ 1.13
LRCH3-201ENST00000334859 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
LRCH3-201ENST00000334859 PTPRCP08575 1304 aa22.09■■□□□ 1.13
LRCH3-201ENST00000334859 TBC1D9Q6ZT07 1266 aa22.09■■□□□ 1.13
LRCH3-201ENST00000334859 CEP170BQ9Y4F5 1589 aaPredicted RBP22.09■■□□□ 1.13
LRCH3-201ENST00000334859 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.13
LRCH3-201ENST00000334859 NLRP6P59044 892 aa22.08■■□□□ 1.13
LRCH3-201ENST00000334859 IL27Q8NEV9 243 aa22.08■■□□□ 1.13
LRCH3-201ENST00000334859 KDRP35968 1356 aa22.08■■□□□ 1.13
LRCH3-201ENST00000334859 ATP10DQ9P241 1426 aa22.08■■□□□ 1.12
LRCH3-201ENST00000334859 EYA1Q99502 592 aa22.08■■□□□ 1.12
LRCH3-201ENST00000334859 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
LRCH3-201ENST00000334859 IGSF1Q8N6C5 1336 aa22.07■■□□□ 1.12
LRCH3-201ENST00000334859 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
LRCH3-201ENST00000334859 DCTPP1Q9H773 170 aa22.06■■□□□ 1.12
LRCH3-201ENST00000334859 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
LRCH3-201ENST00000334859 KCNA6P17658 529 aa22.05■■□□□ 1.12
LRCH3-201ENST00000334859 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
LRCH3-201ENST00000334859 CHMP5Q9NZZ3 219 aa22.05■■□□□ 1.12
LRCH3-201ENST00000334859 MEIS3Q99687 375 aa22.05■■□□□ 1.12
LRCH3-201ENST00000334859 CDC45O75419 566 aa22.04■■□□□ 1.12
LRCH3-201ENST00000334859 CEP85Q6P2H3 762 aa22.04■■□□□ 1.12
LRCH3-201ENST00000334859 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
LRCH3-201ENST00000334859 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
LRCH3-201ENST00000334859 PLEKHM2Q8IWE5 1019 aa22.03■■□□□ 1.12
LRCH3-201ENST00000334859 RPAP2Q8IXW5 612 aaPredicted RBP22.03■■□□□ 1.12
LRCH3-201ENST00000334859 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
LRCH3-201ENST00000334859 GSPT1P15170 499 aaKnown RBP22.03■■□□□ 1.12
LRCH3-201ENST00000334859 APBB1O00213 710 aa22.02■■□□□ 1.12
LRCH3-201ENST00000334859 SLC4A10Q6U841 1118 aa22.02■■□□□ 1.12
LRCH3-201ENST00000334859 SNX21Q969T3 373 aa22.01■■□□□ 1.11
LRCH3-201ENST00000334859 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
LRCH3-201ENST00000334859 G2E3Q7L622 706 aa22■■□□□ 1.11
LRCH3-201ENST00000334859 F6X3S4 739 aa22■■□□□ 1.11
LRCH3-201ENST00000334859 HOXC9P31274 260 aa22■■□□□ 1.11
LRCH3-201ENST00000334859 C14orf37Q86TY3 774 aa22■■□□□ 1.11
LRCH3-201ENST00000334859 C16orf71Q8IYS4 520 aaPredicted RBP22■■□□□ 1.11
LRCH3-201ENST00000334859 ABTB2Q8N961 1025 aa22■■□□□ 1.11
LRCH3-201ENST00000334859 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
LRCH3-201ENST00000334859 NCOA3Q9Y6Q9 1424 aa21.99■■□□□ 1.11
LRCH3-201ENST00000334859 TTC22Q5TAA0 569 aa21.99■■□□□ 1.11
LRCH3-201ENST00000334859 STK31Q9BXU1 1019 aa21.99■■□□□ 1.11
LRCH3-201ENST00000334859 MCM4P33991 863 aa21.98■■□□□ 1.11
LRCH3-201ENST00000334859 KIF2CQ99661 725 aa21.98■■□□□ 1.11
LRCH3-201ENST00000334859 MARF1Q9Y4F3 1742 aaKnown RBP21.98■■□□□ 1.11
LRCH3-201ENST00000334859 OTUD7AQ8TE49 926 aaPredicted RBP21.97■■□□□ 1.11
LRCH3-201ENST00000334859 GNAT3A8MTJ3 354 aa21.97■■□□□ 1.11
LRCH3-201ENST00000334859 SMARCA5O60264 1052 aaPredicted RBP21.97■■□□□ 1.11
LRCH3-201ENST00000334859 LRRC37A3O60309 1634 aa21.97■■□□□ 1.11
LRCH3-201ENST00000334859 CCT4P50991 539 aaKnown RBP21.96■■□□□ 1.11
LRCH3-201ENST00000334859 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
LRCH3-201ENST00000334859 HMMRO75330 724 aa21.95■■□□□ 1.1
LRCH3-201ENST00000334859 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
LRCH3-201ENST00000334859 HSP90AA1P07900 732 aaKnown RBP21.95■■□□□ 1.1
LRCH3-201ENST00000334859 NECTIN2Q92692 538 aa21.94■■□□□ 1.1
LRCH3-201ENST00000334859 MAP3K5Q99683 1374 aa21.94■■□□□ 1.1
LRCH3-201ENST00000334859 NWD1Q149M9 1564 aa21.94■■□□□ 1.1
LRCH3-201ENST00000334859 FAM208AQ9UK61 1670 aaKnown RBP21.93■■□□□ 1.1
LRCH3-201ENST00000334859 CD2BP2O95400 341 aaKnown RBP21.93■■□□□ 1.1
LRCH3-201ENST00000334859 RBM42Q9BTD8 480 aaKnown RBP21.93■■□□□ 1.1
LRCH3-201ENST00000334859 FKBP5Q13451 457 aaPredicted RBP21.92■■□□□ 1.1
LRCH3-201ENST00000334859 USP54Q70EL1 1684 aa21.92■■□□□ 1.1
LRCH3-201ENST00000334859 EIF5BO60841 1220 aaKnown RBP21.92■■□□□ 1.1
LRCH3-201ENST00000334859 CCDC30Q5VVM6 783 aa21.92■■□□□ 1.1
LRCH3-201ENST00000334859 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
LRCH3-201ENST00000334859 FLIIQ13045 1269 aa21.91■■□□□ 1.1
LRCH3-201ENST00000334859 DDIT3P35638 169 aa21.91■■□□□ 1.1
LRCH3-201ENST00000334859 PHF8Q9UPP1 1060 aa21.91■■□□□ 1.1
LRCH3-201ENST00000334859 K7ELQ4 463 aaPredicted RBP21.9■■□□□ 1.1
LRCH3-201ENST00000334859 RBM33Q96EV2 1170 aaKnown RBP21.9■■□□□ 1.1
LRCH3-201ENST00000334859 FOXD4L1Q9NU39 408 aa21.9■■□□□ 1.1
LRCH3-201ENST00000334859 GNAI2P04899 355 aa21.9■■□□□ 1.1
LRCH3-201ENST00000334859 SDSP20132 328 aa21.9■■□□□ 1.1
LRCH3-201ENST00000334859 CASC1Q6TDU7 716 aa21.9■■□□□ 1.1
LRCH3-201ENST00000334859 IL17REQ8NFR9 667 aa21.89■■□□□ 1.09
LRCH3-201ENST00000334859 LTN1O94822 1766 aa21.89■■□□□ 1.09
LRCH3-201ENST00000334859 GZF1Q9H116 711 aaPredicted RBP21.89■■□□□ 1.09
LRCH3-201ENST00000334859 DDX11L8A8MPP1 907 aa21.88■■□□□ 1.09
LRCH3-201ENST00000334859 CIZ1Q9ULV3 898 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-201ENST00000334859 TAF7Q15545 349 aaPredicted RBP21.87■■□□□ 1.09
LRCH3-201ENST00000334859 ZBTB7CA1YPR0 619 aa21.86■■□□□ 1.09
LRCH3-201ENST00000334859 TRAK2O60296 914 aa21.86■■□□□ 1.09
LRCH3-201ENST00000334859 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
LRCH3-201ENST00000334859 ARXQ96QS3 562 aa21.86■■□□□ 1.09
LRCH3-201ENST00000334859 EXOC6BQ9Y2D4 811 aa21.86■■□□□ 1.09
LRCH3-201ENST00000334859 GNAI3P08754 354 aa21.85■■□□□ 1.09
LRCH3-201ENST00000334859 ANKLE2Q86XL3 938 aa21.85■■□□□ 1.09
LRCH3-201ENST00000334859 TNPO1Q92973 898 aaKnown RBP21.85■■□□□ 1.09
LRCH3-201ENST00000334859 CHD2O14647 1828 aaKnown RBP21.84■■□□□ 1.09
LRCH3-201ENST00000334859 RABEP1Q15276 862 aa21.84■■□□□ 1.09
LRCH3-201ENST00000334859 L1TD1Q5T7N2 865 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms