RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
AP1S3-201ENST00000334271 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
AP1S3-201ENST00000334271 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
AP1S3-201ENST00000334271 AMPHP49418 695 aa13.56□□□□□ -0.24
AP1S3-201ENST00000334271 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 CRYBG1Q9Y4K1 1723 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 IP6K1Q92551 441 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 CAMTA1Q9Y6Y1 1673 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 DUSP27Q5VZP5 1158 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 CCDC146Q8IYE0 955 aa13.55□□□□□ -0.24
AP1S3-201ENST00000334271 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
AP1S3-201ENST00000334271 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 LTBP4Q8N2S1 1624 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 FOXO3O43524 673 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 HOXC9P31274 260 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 NFE2L2Q16236 605 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
AP1S3-201ENST00000334271 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
AP1S3-201ENST00000334271 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
AP1S3-201ENST00000334271 CPDO75976 1380 aa13.53□□□□□ -0.24
AP1S3-201ENST00000334271 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
AP1S3-201ENST00000334271 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.24
AP1S3-201ENST00000334271 IPO4Q8TEX9 1081 aaKnown RBP13.52□□□□□ -0.24
AP1S3-201ENST00000334271 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
AP1S3-201ENST00000334271 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
AP1S3-201ENST00000334271 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
AP1S3-201ENST00000334271 GCP02774 474 aa13.51□□□□□ -0.25
AP1S3-201ENST00000334271 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
AP1S3-201ENST00000334271 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
AP1S3-201ENST00000334271 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.51□□□□□ -0.25
AP1S3-201ENST00000334271 AHDC1Q5TGY3 1603 aaPredicted RBP13.51□□□□□ -0.25
AP1S3-201ENST00000334271 PTMSP20962 102 aa13.51□□□□□ -0.25
AP1S3-201ENST00000334271 SETQ01105 290 aaPredicted RBP13.51□□□□□ -0.25
AP1S3-201ENST00000334271 BRINP3Q76B58 766 aa13.51□□□□□ -0.25
AP1S3-201ENST00000334271 GRIPAP1Q4V328 841 aa13.5□□□□□ -0.25
AP1S3-201ENST00000334271 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
AP1S3-201ENST00000334271 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
AP1S3-201ENST00000334271 RIPK4P57078 832 aa13.49□□□□□ -0.25
AP1S3-201ENST00000334271 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
AP1S3-201ENST00000334271 GAS2L2Q8NHY3 880 aa13.48□□□□□ -0.25
AP1S3-201ENST00000334271 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
AP1S3-201ENST00000334271 DLG5Q8TDM6 1919 aa13.48□□□□□ -0.25
AP1S3-201ENST00000334271 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
AP1S3-201ENST00000334271 COL18A1P39060 1754 aa13.48□□□□□ -0.25
AP1S3-201ENST00000334271 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
AP1S3-201ENST00000334271 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
AP1S3-201ENST00000334271 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
AP1S3-201ENST00000334271 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
AP1S3-201ENST00000334271 GNAI1P63096 354 aa13.46□□□□□ -0.25
AP1S3-201ENST00000334271 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
AP1S3-201ENST00000334271 FBLN1P23142 703 aa13.45□□□□□ -0.26
AP1S3-201ENST00000334271 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
AP1S3-201ENST00000334271 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
AP1S3-201ENST00000334271 FAM43BQ6ZT52 329 aaPredicted RBP13.45□□□□□ -0.26
AP1S3-201ENST00000334271 EYA1Q99502 592 aa13.45□□□□□ -0.26
AP1S3-201ENST00000334271 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
AP1S3-201ENST00000334271 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 HMOX1P09601 288 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 MS4A1P11836 297 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 KCNG1Q9UIX4 513 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 ANAPC15P60006 121 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
AP1S3-201ENST00000334271 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
AP1S3-201ENST00000334271 KDM4AO75164 1064 aa13.42□□□□□ -0.26
AP1S3-201ENST00000334271 MCCP23508 829 aa13.42□□□□□ -0.26
AP1S3-201ENST00000334271 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
AP1S3-201ENST00000334271 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
AP1S3-201ENST00000334271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
AP1S3-201ENST00000334271 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
AP1S3-201ENST00000334271 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
AP1S3-201ENST00000334271 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
AP1S3-201ENST00000334271 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
AP1S3-201ENST00000334271 ALDH1L2Q3SY69 923 aa13.4□□□□□ -0.26
AP1S3-201ENST00000334271 KIAA0232Q92628 1395 aa13.4□□□□□ -0.26
AP1S3-201ENST00000334271 ERBB3P21860 1342 aa13.4□□□□□ -0.26
AP1S3-201ENST00000334271 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
AP1S3-201ENST00000334271 MAFGO15525 162 aa13.39□□□□□ -0.27
AP1S3-201ENST00000334271 FTSJ3Q8IY81 847 aaKnown RBP13.39□□□□□ -0.27
AP1S3-201ENST00000334271 SPINK5Q9NQ38 1064 aaPredicted RBP13.39□□□□□ -0.27
AP1S3-201ENST00000334271 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
AP1S3-201ENST00000334271 SOX12O15370 315 aa13.39□□□□□ -0.27
AP1S3-201ENST00000334271 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
AP1S3-201ENST00000334271 PIAS4Q8N2W9 510 aaPredicted RBP13.39□□□□□ -0.27
AP1S3-201ENST00000334271 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
AP1S3-201ENST00000334271 CHMP4BQ9H444 224 aaKnown RBP13.39□□□□□ -0.27
AP1S3-201ENST00000334271 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
AP1S3-201ENST00000334271 TOM1O60784 492 aa13.38□□□□□ -0.27
AP1S3-201ENST00000334271 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
AP1S3-201ENST00000334271 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
AP1S3-201ENST00000334271 ANKRD24Q8TF21 1146 aa13.38□□□□□ -0.27
AP1S3-201ENST00000334271 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms