RNA–Protein interactions for RNA: ENST00000333843.8

MBD3L3-201, Transcript of methyl-CpG binding domain protein 3 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3L3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3-201ENST00000333843 POLKQ9UBT6 870 aa18.76■□□□□ 0.59
MBD3L3-201ENST00000333843 ZCRB1Q8TBF4 217 aaKnown RBP18.75■□□□□ 0.59
MBD3L3-201ENST00000333843 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
MBD3L3-201ENST00000333843 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 TATP17735 454 aaPredicted RBP18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 R3HDM1Q15032 1099 aaKnown RBP18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
MBD3L3-201ENST00000333843 PPM1GO15355 546 aaPredicted RBP18.71■□□□□ 0.59
MBD3L3-201ENST00000333843 KCNQ2O43526 872 aa18.71■□□□□ 0.59
MBD3L3-201ENST00000333843 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
MBD3L3-201ENST00000333843 USHBP1Q8N6Y0 703 aa18.71■□□□□ 0.59
MBD3L3-201ENST00000333843 DDX54Q8TDD1 881 aaKnown RBP18.71■□□□□ 0.59
MBD3L3-201ENST00000333843 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
MBD3L3-201ENST00000333843 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
MBD3L3-201ENST00000333843 TXNRD1Q16881 649 aa18.7■□□□□ 0.58
MBD3L3-201ENST00000333843 ACSBG1Q96GR2 724 aa18.7■□□□□ 0.58
MBD3L3-201ENST00000333843 LY75O60449 1722 aa18.69■□□□□ 0.58
MBD3L3-201ENST00000333843 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
MBD3L3-201ENST00000333843 PROM2Q8N271 834 aa18.68■□□□□ 0.58
MBD3L3-201ENST00000333843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
MBD3L3-201ENST00000333843 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
MBD3L3-201ENST00000333843 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
MBD3L3-201ENST00000333843 EIF4A2Q14240 407 aaKnown RBP18.67■□□□□ 0.58
MBD3L3-201ENST00000333843 EYA1Q99502 592 aa18.67■□□□□ 0.58
MBD3L3-201ENST00000333843 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
MBD3L3-201ENST00000333843 PER1O15534 1290 aaPredicted RBP18.66■□□□□ 0.58
MBD3L3-201ENST00000333843 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
MBD3L3-201ENST00000333843 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
MBD3L3-201ENST00000333843 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
MBD3L3-201ENST00000333843 KAT6BQ8WYB5 2073 aa18.64■□□□□ 0.57
MBD3L3-201ENST00000333843 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
MBD3L3-201ENST00000333843 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
MBD3L3-201ENST00000333843 CYP27B1O15528 508 aa18.62■□□□□ 0.57
MBD3L3-201ENST00000333843 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
MBD3L3-201ENST00000333843 NKX1-1Q15270 411 aaPredicted RBP18.62■□□□□ 0.57
MBD3L3-201ENST00000333843 KDRP35968 1356 aa18.62■□□□□ 0.57
MBD3L3-201ENST00000333843 ITGB4P16144 1822 aa18.61■□□□□ 0.57
MBD3L3-201ENST00000333843 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
MBD3L3-201ENST00000333843 HMGB2P26583 209 aaKnown RBP18.6■□□□□ 0.57
MBD3L3-201ENST00000333843 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
MBD3L3-201ENST00000333843 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
MBD3L3-201ENST00000333843 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
MBD3L3-201ENST00000333843 LRRC4BQ9NT99 713 aa18.57■□□□□ 0.56
MBD3L3-201ENST00000333843 C5P01031 1676 aa18.57■□□□□ 0.56
MBD3L3-201ENST00000333843 PHKG2P15735 406 aa18.56■□□□□ 0.56
MBD3L3-201ENST00000333843 COL3A1P02461 1466 aaPredicted RBP18.55■□□□□ 0.56
MBD3L3-201ENST00000333843 IL13P35225 146 aa18.55■□□□□ 0.56
MBD3L3-201ENST00000333843 AMOTQ4VCS5 1084 aa18.55■□□□□ 0.56
MBD3L3-201ENST00000333843 TUBGCP6Q96RT7 1819 aa18.55■□□□□ 0.56
MBD3L3-201ENST00000333843 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
MBD3L3-201ENST00000333843 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
MBD3L3-201ENST00000333843 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
MBD3L3-201ENST00000333843 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
MBD3L3-201ENST00000333843 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 MTHFSP49914 203 aa18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 ZNF827Q17R98 1081 aa18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 COL24A1Q17RW2 1714 aa18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 ZNF831Q5JPB2 1677 aa18.53■□□□□ 0.56
MBD3L3-201ENST00000333843 MPRIPQ6WCQ1 1025 aa18.51■□□□□ 0.55
MBD3L3-201ENST00000333843 MTFR1LQ9H019 292 aa18.51■□□□□ 0.55
MBD3L3-201ENST00000333843 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
MBD3L3-201ENST00000333843 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
MBD3L3-201ENST00000333843 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
MBD3L3-201ENST00000333843 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
MBD3L3-201ENST00000333843 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
MBD3L3-201ENST00000333843 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
MBD3L3-201ENST00000333843 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
MBD3L3-201ENST00000333843 SLC16A10Q8TF71 515 aa18.49■□□□□ 0.55
MBD3L3-201ENST00000333843 PIGBQ92521 554 aa18.49■□□□□ 0.55
MBD3L3-201ENST00000333843 DIAPH1O60610 1272 aaKnown RBP18.48■□□□□ 0.55
MBD3L3-201ENST00000333843 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
MBD3L3-201ENST00000333843 PDGFDQ9GZP0 370 aaPredicted RBP18.48■□□□□ 0.55
MBD3L3-201ENST00000333843 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
MBD3L3-201ENST00000333843 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
MBD3L3-201ENST00000333843 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
MBD3L3-201ENST00000333843 PPP1R1BQ9UD71 204 aaPredicted RBP18.47■□□□□ 0.55
MBD3L3-201ENST00000333843 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
MBD3L3-201ENST00000333843 MRC1P22897 1456 aa18.46■□□□□ 0.55
MBD3L3-201ENST00000333843 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
MBD3L3-201ENST00000333843 PTGER2P43116 358 aa18.46■□□□□ 0.55
MBD3L3-201ENST00000333843 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
MBD3L3-201ENST00000333843 SGIP1Q9BQI5 828 aa18.45■□□□□ 0.54
MBD3L3-201ENST00000333843 TFCP2L1Q9NZI6 479 aa18.45■□□□□ 0.54
MBD3L3-201ENST00000333843 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
MBD3L3-201ENST00000333843 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
MBD3L3-201ENST00000333843 KCNQ4P56696 695 aa18.43■□□□□ 0.54
MBD3L3-201ENST00000333843 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
MBD3L3-201ENST00000333843 LOC102724428A0A0B4J2F2 783 aa18.42■□□□□ 0.54
MBD3L3-201ENST00000333843 SIK1P57059 783 aa18.42■□□□□ 0.54
MBD3L3-201ENST00000333843 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
MBD3L3-201ENST00000333843 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
MBD3L3-201ENST00000333843 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
MBD3L3-201ENST00000333843 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
MBD3L3-201ENST00000333843 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms