RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 TBC1D32Q96NH3 1257 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 ORAI2Q96SN7 254 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 FAM83GA6ND36 823 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 ALDH1L2Q3SY69 923 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 CLUAP1Q96AJ1 413 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 EYA1Q99502 592 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
LCK-201ENST00000333070 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
LCK-201ENST00000333070 MBIPQ9NS73 344 aa20.78■□□□□ 0.92
LCK-201ENST00000333070 MRE11P49959 708 aa20.77■□□□□ 0.92
LCK-201ENST00000333070 NFAT5O94916 1531 aa20.77■□□□□ 0.91
LCK-201ENST00000333070 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
LCK-201ENST00000333070 RTL1A6NKG5 1358 aa20.76■□□□□ 0.91
LCK-201ENST00000333070 DCTN1Q14203 1278 aa20.76■□□□□ 0.91
LCK-201ENST00000333070 STRCP1A6NGW2 1772 aa20.75■□□□□ 0.91
LCK-201ENST00000333070 VAMP4O75379 141 aa20.75■□□□□ 0.91
LCK-201ENST00000333070 DZIP1LQ8IYY4 767 aaKnown RBP20.75■□□□□ 0.91
LCK-201ENST00000333070 PANK2Q9BZ23 570 aa20.75■□□□□ 0.91
LCK-201ENST00000333070 LTN1O94822 1766 aa20.75■□□□□ 0.91
LCK-201ENST00000333070 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
LCK-201ENST00000333070 TRIM27P14373 513 aa20.74■□□□□ 0.91
LCK-201ENST00000333070 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
LCK-201ENST00000333070 FOXO3O43524 673 aa20.73■□□□□ 0.91
LCK-201ENST00000333070 MVPQ14764 893 aaKnown RBP20.73■□□□□ 0.91
LCK-201ENST00000333070 ISY1Q9ULR0 285 aaKnown RBP20.73■□□□□ 0.91
LCK-201ENST00000333070 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
LCK-201ENST00000333070 KIF16BQ96L93 1317 aa20.73■□□□□ 0.91
LCK-201ENST00000333070 TSPYL6Q8N831 410 aa20.73■□□□□ 0.91
LCK-201ENST00000333070 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
LCK-201ENST00000333070 KIF1AQ12756 1690 aa20.72■□□□□ 0.91
LCK-201ENST00000333070 MTHFSDQ2M296 383 aaKnown RBP20.72■□□□□ 0.91
LCK-201ENST00000333070 KCNH5Q8NCM2 988 aa20.72■□□□□ 0.91
LCK-201ENST00000333070 IP6K1Q92551 441 aa20.72■□□□□ 0.91
LCK-201ENST00000333070 TRPM3Q9HCF6 1732 aaPredicted RBP20.72■□□□□ 0.91
LCK-201ENST00000333070 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
LCK-201ENST00000333070 TRAK2O60296 914 aa20.71■□□□□ 0.91
LCK-201ENST00000333070 FTSJ3Q8IY81 847 aaKnown RBP20.71■□□□□ 0.91
LCK-201ENST00000333070 ARXQ96QS3 562 aa20.71■□□□□ 0.91
LCK-201ENST00000333070 TMEM94Q12767 1356 aa20.71■□□□□ 0.91
LCK-201ENST00000333070 CHL1O00533 1208 aa20.7■□□□□ 0.91
LCK-201ENST00000333070 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.91
LCK-201ENST00000333070 HSPA2P54652 639 aa20.7■□□□□ 0.91
LCK-201ENST00000333070 CHMP5Q9NZZ3 219 aa20.7■□□□□ 0.91
LCK-201ENST00000333070 C8orf58Q8NAV2 365 aa20.7■□□□□ 0.9
LCK-201ENST00000333070 GZF1Q9H116 711 aaPredicted RBP20.7■□□□□ 0.9
LCK-201ENST00000333070 CRB1P82279 1406 aa20.7■□□□□ 0.9
LCK-201ENST00000333070 MCM10Q7L590 875 aa20.69■□□□□ 0.9
LCK-201ENST00000333070 PCDHB15Q9Y5E8 787 aa20.69■□□□□ 0.9
LCK-201ENST00000333070 SLIT3O75094 1523 aa20.69■□□□□ 0.9
LCK-201ENST00000333070 DCCP43146 1447 aa20.69■□□□□ 0.9
LCK-201ENST00000333070 MRPL50Q8N5N7 158 aaKnown RBP20.69■□□□□ 0.9
LCK-201ENST00000333070 ESPNB1AK53 854 aa20.68■□□□□ 0.9
LCK-201ENST00000333070 XPCQ01831 940 aaPredicted RBP20.68■□□□□ 0.9
LCK-201ENST00000333070 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
LCK-201ENST00000333070 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
LCK-201ENST00000333070 MST1RQ04912 1400 aa20.68■□□□□ 0.9
LCK-201ENST00000333070 KRT28Q7Z3Y7 464 aa20.68■□□□□ 0.9
LCK-201ENST00000333070 KDM4FA0A1W2PPD8 638 aa20.66■□□□□ 0.9
LCK-201ENST00000333070 ELL2O00472 640 aaPredicted RBP20.66■□□□□ 0.9
LCK-201ENST00000333070 ATF3P18847 181 aa20.66■□□□□ 0.9
LCK-201ENST00000333070 ARHGAP45Q92619 1136 aa20.66■□□□□ 0.9
LCK-201ENST00000333070 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
LCK-201ENST00000333070 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
LCK-201ENST00000333070 HTATSF1O43719 755 aaKnown RBP20.65■□□□□ 0.9
LCK-201ENST00000333070 GCP02774 474 aa20.65■□□□□ 0.9
LCK-201ENST00000333070 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
LCK-201ENST00000333070 TMEM57Q8N5G2 664 aa20.65■□□□□ 0.9
LCK-201ENST00000333070 DDX11L8A8MPP1 907 aa20.64■□□□□ 0.89
LCK-201ENST00000333070 ARHGEF25Q86VW2 580 aa20.64■□□□□ 0.89
LCK-201ENST00000333070 KIAA0232Q92628 1395 aa20.64■□□□□ 0.89
LCK-201ENST00000333070 LMTK3Q96Q04 1460 aa20.63■□□□□ 0.89
LCK-201ENST00000333070 TPM2P07951 284 aa20.63■□□□□ 0.89
LCK-201ENST00000333070 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
LCK-201ENST00000333070 ALS2Q96Q42 1657 aa20.62■□□□□ 0.89
LCK-201ENST00000333070 ITPRIPQ8IWB1 547 aa20.62■□□□□ 0.89
LCK-201ENST00000333070 PDZRN3Q9UPQ7 1066 aa20.62■□□□□ 0.89
LCK-201ENST00000333070 STRCQ7RTU9 1775 aa20.61■□□□□ 0.89
LCK-201ENST00000333070 LRRC37A3O60309 1634 aa20.61■□□□□ 0.89
LCK-201ENST00000333070 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
LCK-201ENST00000333070 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
LCK-201ENST00000333070 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
LCK-201ENST00000333070 MSH6P52701 1360 aa20.6■□□□□ 0.89
LCK-201ENST00000333070 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
LCK-201ENST00000333070 RWDD1Q9H446 243 aaPredicted RBP20.6■□□□□ 0.89
LCK-201ENST00000333070 GNAT3A8MTJ3 354 aa20.59■□□□□ 0.89
LCK-201ENST00000333070 HAP1P54257 671 aaPredicted RBP20.59■□□□□ 0.89
LCK-201ENST00000333070 LMOD2Q6P5Q4 547 aa20.59■□□□□ 0.89
LCK-201ENST00000333070 USHBP1Q8N6Y0 703 aa20.59■□□□□ 0.89
LCK-201ENST00000333070 ZBTB40Q9NUA8 1239 aa20.59■□□□□ 0.89
LCK-201ENST00000333070 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
LCK-201ENST00000333070 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.89
LCK-201ENST00000333070 ERBB4Q15303 1308 aa20.58■□□□□ 0.89
LCK-201ENST00000333070 RGPD2P0DJD1 1756 aa20.58■□□□□ 0.89
LCK-201ENST00000333070 TRIM44Q96DX7 344 aaPredicted RBP20.58■□□□□ 0.89
LCK-201ENST00000333070 C22orf23Q9BZE7 217 aa20.58■□□□□ 0.89
LCK-201ENST00000333070 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
LCK-201ENST00000333070 NCAPD2Q15021 1401 aa20.57■□□□□ 0.88
LCK-201ENST00000333070 PDCL3Q9H2J4 239 aa20.57■□□□□ 0.88
LCK-201ENST00000333070 ABCC4O15439 1325 aa20.57■□□□□ 0.88
LCK-201ENST00000333070 ZBTB7CA1YPR0 619 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms